Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is cyp125 [H]

Identifier: 119716964

GI number: 119716964

Start: 2911727

End: 2912968

Strand: Reverse

Name: cyp125 [H]

Synonym: Noca_2739

Alternate gene names: 119716964

Gene position: 2912968-2911727 (Counterclockwise)

Preceding gene: 119716966

Following gene: 119716962

Centisome position: 58.42

GC content: 68.44

Gene sequence:

>1242_bases
GTGACCGCATCCGACGTCCTCCCCGAGGGTTTCGACTTCACCGACCCGGACCTGATCCAGCGCGCGATCCCGCACGACGA
GTTCCGCGCCGCGCGCCGGCACGCGCCGATCACCTGGATCGAACAGCCGTGGGAGCCGCGCAGCGGCTTCGCCGAGGAGG
CCGGCACCGGCTACTACGCGGTCACCCGCCACGAGGACGTCGCCGCGATCTCGAAGGACAGCAAGAACTGGTCGACGTAC
GAGAACGGCGCGATCATCCGGTTCCCCGGGGAGATGGCGCGCGAGCAGGTCGAGCTCCAGCGGGTGATCCTGATCAACCA
GGACCCGCCCGAGCACACCGCGACCCGCGGGATCGTCTCGCGCGGCTTCACGCCGCGCTCGATCGCCGAGCTCGAGGACA
CCATGGTCCAGCGGGCCACGACGATCATGAAGGAGGCCGTCGCGCGCGGCACCGGCAACTTCGTCGAGGAGGTCGCTGCG
GAGCTCCCGCTGCAGGCGATCGCCGACCTGATCGGCGTGCCGCAGGAGGACCGGCACAAGCTCTTCGAGTGGTCCAACCA
GATGCTCGCAGGCGAGGACCCGGACTACGCCGGCGAGAACGAGGTCGCCGCGGCCGAGATCCTCGGCTACTCGATGATGC
TGGCCGCGGACCGGCAGGCCAACCCCCGCGACGACCTGATCACCAAGCTGATCAACGCCCACAAGGGTGAGCGCGGCCTG
ACCGACGACGAGTTCGGCTACTTCGTGATCCTGCTGGCGGTCGCCGGCAACGAGACCACCCGCAACGCGATCACCCACGG
CATGAACGCCTTCCTCGACAACCCCGAGCAGTGGGAGATCTGGAAGAACGACCGGCCGGCCACGATGGTCGACGAGATCG
TCCGCTGGGCCACCCCGGTCAGCGTCTTCCAGCGCACCGCCCTCAGCGACGTCGAGCTCGGCGGGGTGCGGTTCAAGAAG
GGCCAGAGGGCCGCGCTGTTCTACGCCAGCGCGAACTTCGACGAGGACGTCTTCGAGGACCCCTACACCTTCAACATCCT
GCGCGACCCGAACCCGCAGCTGGGCTTTGGCGGGCACGGTGCGCACTACTGCCTGGGCCACAACCTGGCCCGCCAGGAGA
TGCGGGCGATCTTCAACGCGATCGCCGACTACGCGCCCGACATCACCAAGCTCGCCGAGCCGAAGCGGCTGCGGCACTCC
TGGGTCAACGGCATCAAGGACCTCCAGGTCCGTTACGCCTGA

Upstream 100 bases:

>100_bases
TAGAACACGTTCTTGTCCTGGACAACCTTCCCCTGCGTACCTTCGGTATGTAGTCTCTGTCACTAGAACGTGTTACAGCC
AGCCAGCTGAGGGAGCTCCA

Downstream 100 bases:

>100_bases
GCCGGGGCTCGCTCAGGCGCGAGCCGTCAGTACGACGTGGCCGTCCTCGGTGATCGCCACCGTGTGCTCCATGTGCGCGC
CCCGGGACCCGTCCTTGCTG

Product: cytochrome P450 CYP125

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYAVTRHEDVAAISKDSKNWSTY
ENGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVSRGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAA
ELPLQAIADLIGVPQEDRHKLFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGL
TDDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPVSVFQRTALSDVELGGVRFKK
GQRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHGAHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHS
WVNGIKDLQVRYA

Sequences:

>Translated_413_residues
MTASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYAVTRHEDVAAISKDSKNWSTY
ENGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVSRGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAA
ELPLQAIADLIGVPQEDRHKLFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGL
TDDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPVSVFQRTALSDVELGGVRFKK
GQRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHGAHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHS
WVNGIKDLQVRYA
>Mature_412_residues
TASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYAVTRHEDVAAISKDSKNWSTYE
NGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVSRGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAAE
LPLQAIADLIGVPQEDRHKLFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGLT
DDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPVSVFQRTALSDVELGGVRFKKG
QRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHGAHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHSW
VNGIKDLQVRYA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome P450 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001128
- InterPro:   IPR002397 [H]

Pfam domain/function: PF00067 p450 [H]

EC number: NA

Molecular weight: Translated: 46386; Mature: 46255

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYA
CCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCEECCCCCCCCCCCHHHCCCCEEE
VTRHEDVAAISKDSKNWSTYENGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVS
EECCCCHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH
RGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAAELPLQAIADLIGVPQEDRHK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHH
LFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGL
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCC
TDDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPV
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHH
SVFQRTALSDVELGGVRFKKGQRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHG
HHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCC
AHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHSWVNGIKDLQVRYA
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHHHEEECC
>Mature Secondary Structure 
TASDVLPEGFDFTDPDLIQRAIPHDEFRAARRHAPITWIEQPWEPRSGFAEEAGTGYYA
CCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHCCCCEECCCCCCCCCCCHHHCCCCEEE
VTRHEDVAAISKDSKNWSTYENGAIIRFPGEMAREQVELQRVILINQDPPEHTATRGIVS
EECCCCHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHEEEEECCCCCHHHHHHHHHH
RGFTPRSIAELEDTMVQRATTIMKEAVARGTGNFVEEVAAELPLQAIADLIGVPQEDRHK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCCCCHHHHH
LFEWSNQMLAGEDPDYAGENEVAAAEILGYSMMLAADRQANPRDDLITKLINAHKGERGL
HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHCCCCCCC
TDDEFGYFVILLAVAGNETTRNAITHGMNAFLDNPEQWEIWKNDRPATMVDEIVRWATPV
CCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCHH
SVFQRTALSDVELGGVRFKKGQRAALFYASANFDEDVFEDPYTFNILRDPNPQLGFGGHG
HHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCCHHHHCCCCEEEEEECCCCCCCCCCCC
AHYCLGHNLARQEMRAIFNAIADYAPDITKLAEPKRLRHSWVNGIKDLQVRYA
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHCCHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]