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The map label for this gene is yebC [C]

Identifier: 119716610

GI number: 119716610

Start: 2538629

End: 2539408

Strand: Direct

Name: yebC [C]

Synonym: Noca_2383

Alternate gene names: 119716610

Gene position: 2538629-2539408 (Clockwise)

Preceding gene: 119716609

Following gene: 119716612

Centisome position: 50.92

GC content: 67.82

Gene sequence:

>780_bases
ATGTCTGGCCACTCCAAGTGGGCGACCACCAAGCACAAGAAGGCGGCGATCGACGCCAAGCGCGGCAAGCTGTTCGCCAA
GCTGATCAAGAACATCGAGATCGCAGCCAAGATGGGCGGCCCCGACCCGGCCGGCAACCCGACCCTCTACGACGCCATCC
AGAAGGCCAAGAAGCAGTCGGTCCCGAACAAGAACATCGACTCCGCGGTCAAGCGCGGCGGTGGCCTCGAGAGCGGCGGC
GTCGACTACGAGACGATCATGTACGAGGCCTACGGACCGCAGGGCGTGGCGCTGCTCGTCGAGTGCCTCACCGACAACCG
CAACCGCGCGGCGATGGAGGTCCGCACCGCGGTCACCCGCAACGGCGGCACGATGGCCGACCCCGGCTCGGTCTCGCGGC
TGTTCACCCGCAAGGGCGTCGTGGTGGTCGAGAAGGAGCAGGAGCGCGGCGGCAAGCCCTGGGAGATCAGCGAGGACGAC
ATCCTCGAGGCGACCCTCGATGCGGGCGCGGAGGAGGTCGACGACCTCGGGGAGAGCTTCGAGATCCAGTCGGAGGCCTC
CGACGTCGTCGCGGTGCGTACGGCGCTGCAGGCCGCGGGCATCGACTACGACTCCGCCGAGGTGCAGTTCGTGGCCACCC
TCGACATCCCGGTGGCCGAGACCGACGTCGCGGGCAAGGTGTTCCGCCTGATCGACGCGGTCGACGACCTGGACGACGTC
CAGAACGTGTTCACCAACGCCGACATCCCCGACGACGTCCTGGACTCCATCGACGCGTAG

Upstream 100 bases:

>100_bases
TTCGCTGATGGCGACGTCGTTCCACCCCGAGGTGGGTGGCGACTCCCGGGTCCACCGGCTGTTCGTGGACCTGGTCACCG
AGGAGAGATAGGGATACGCC

Downstream 100 bases:

>100_bases
CGAGGGCCGGCCGCCGTTCGCTGTAACGCCGGGTTACCCCTTGTGCCGACCCTGCTGCAACACGGTGGCTAGCTGGGGTA
AACGGGCGTTACAGCTCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MSGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAAKMGGPDPAGNPTLYDAIQKAKKQSVPNKNIDSAVKRGGGLESGG
VDYETIMYEAYGPQGVALLVECLTDNRNRAAMEVRTAVTRNGGTMADPGSVSRLFTRKGVVVVEKEQERGGKPWEISEDD
ILEATLDAGAEEVDDLGESFEIQSEASDVVAVRTALQAAGIDYDSAEVQFVATLDIPVAETDVAGKVFRLIDAVDDLDDV
QNVFTNADIPDDVLDSIDA

Sequences:

>Translated_259_residues
MSGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAAKMGGPDPAGNPTLYDAIQKAKKQSVPNKNIDSAVKRGGGLESGG
VDYETIMYEAYGPQGVALLVECLTDNRNRAAMEVRTAVTRNGGTMADPGSVSRLFTRKGVVVVEKEQERGGKPWEISEDD
ILEATLDAGAEEVDDLGESFEIQSEASDVVAVRTALQAAGIDYDSAEVQFVATLDIPVAETDVAGKVFRLIDAVDDLDDV
QNVFTNADIPDDVLDSIDA
>Mature_258_residues
SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAAKMGGPDPAGNPTLYDAIQKAKKQSVPNKNIDSAVKRGGGLESGGV
DYETIMYEAYGPQGVALLVECLTDNRNRAAMEVRTAVTRNGGTMADPGSVSRLFTRKGVVVVEKEQERGGKPWEISEDDI
LEATLDAGAEEVDDLGESFEIQSEASDVVAVRTALQAAGIDYDSAEVQFVATLDIPVAETDVAGKVFRLIDAVDDLDDVQ
NVFTNADIPDDVLDSIDA

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=252, Percent_Identity=31.3492063492063, Blast_Score=128, Evalue=5e-30,
Organism=Escherichia coli, GI1788171, Length=256, Percent_Identity=44.140625, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1788294, Length=245, Percent_Identity=35.9183673469388, Blast_Score=122, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17556100, Length=257, Percent_Identity=28.4046692607004, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=272, Percent_Identity=30.5147058823529, Blast_Score=112, Evalue=8e-26,
Organism=Drosophila melanogaster, GI24583305, Length=214, Percent_Identity=28.0373831775701, Blast_Score=74, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2383_NOCSJ (A1SJA3)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_923575.1
- ProteinModelPortal:   A1SJA3
- SMR:   A1SJA3
- STRING:   A1SJA3
- GeneID:   4599483
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_2383
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- PhylomeDB:   A1SJA3
- BioCyc:   NSP35761:NOCA_2383-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27698; Mature: 27567

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAAKMGGPDPAGNPTLYDAIQKAKKQS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHC
VPNKNIDSAVKRGGGLESGGVDYETIMYEAYGPQGVALLVECLTDNRNRAAMEVRTAVTR
CCCCCHHHHHHHCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHC
NGGTMADPGSVSRLFTRKGVVVVEKEQERGGKPWEISEDDILEATLDAGAEEVDDLGESF
CCCCCCCCCHHHHHHHHCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCE
EIQSEASDVVAVRTALQAAGIDYDSAEVQFVATLDIPVAETDVAGKVFRLIDAVDDLDDV
EEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
QNVFTNADIPDDVLDSIDA
HHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure 
SGHSKWATTKHKKAAIDAKRGKLFAKLIKNIEIAAKMGGPDPAGNPTLYDAIQKAKKQS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHC
VPNKNIDSAVKRGGGLESGGVDYETIMYEAYGPQGVALLVECLTDNRNRAAMEVRTAVTR
CCCCCHHHHHHHCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHC
NGGTMADPGSVSRLFTRKGVVVVEKEQERGGKPWEISEDDILEATLDAGAEEVDDLGESF
CCCCCCCCCHHHHHHHHCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHCCCE
EIQSEASDVVAVRTALQAAGIDYDSAEVQFVATLDIPVAETDVAGKVFRLIDAVDDLDDV
EEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
QNVFTNADIPDDVLDSIDA
HHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA