Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716472

Identifier: 119716472

GI number: 119716472

Start: 2395666

End: 2396268

Strand: Direct

Name: 119716472

Synonym: Noca_2245

Alternate gene names: NA

Gene position: 2395666-2396268 (Clockwise)

Preceding gene: 119716471

Following gene: 119716473

Centisome position: 48.05

GC content: 73.96

Gene sequence:

>603_bases
ATGCAGCGTGAGCGACGACGAGACCCCTACCCGTGGACCTGGGAGATCCCCGTAGCGGTGGCCTTGGCGACCCTGTTCGT
CATCGTCATCGGCATCCAGCTCGGCCGATCAGTCGCCAATCTGCTCGCCGGCGCCGGATGGACCTGGCCCGACGCCAACG
CCGGCGCGTTCCCCTCACCCATCGGCACCGCGTTCTGGACCAGCCTTCCCGGCGTCCTCGGCGGCCACGCCGACGCCGGG
CTGCCCAGCCCCACCCCCGACGGTCTGGCCGGCCGCGGCCTGGTCTGGGTCAGCCTCGCCCTGGCCGAGGTCGCGCTGCT
CACCGCGACCATCTGGGTCGGCGCGTGGGCCTACCAGCGCTGGGGCCCGGGCCGCATGCGCGGCATGGCGACCGCAGCCG
AGGCCGAGAAGCTGCTCGGCGTCACCCGGCTCCGCAAGGTCGCCGGCATCGTCCGCCCGGACCTCCACGGCAAGCAGGCC
GCCCCGACACCGGCACCGGTCCAGCGCACCCCCGGCGACCTCACCGAACAACCCGGCCCGCAGCTGGGCCACGGCCTCAG
CCCGTGGCTCCTGGACGGCCGCCGAACGAAGGAACACCGATGA

Upstream 100 bases:

>100_bases
CACGCCCGAGCCGCGCCGTGTGATCGCACCGAAGCCCTGACGGCACATAGGTGACCAGCAAGGCCCAACGACCCACGACC
GCCTGGAGGTGGCCAGACCG

Downstream 100 bases:

>100_bases
GCCACGAAACCCCACTGCACGGCAACCCGACACTTCGCACCCGCGGCCGCCACCTCTTGGGCGGCATCATCTGTCGCCGT
CGCGGACACCGCCCCGTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSPIGTAFWTSLPGVLGGHADAG
LPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQRWGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQA
APTPAPVQRTPGDLTEQPGPQLGHGLSPWLLDGRRTKEHR

Sequences:

>Translated_200_residues
MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSPIGTAFWTSLPGVLGGHADAG
LPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQRWGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQA
APTPAPVQRTPGDLTEQPGPQLGHGLSPWLLDGRRTKEHR
>Mature_200_residues
MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSPIGTAFWTSLPGVLGGHADAG
LPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQRWGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQA
APTPAPVQRTPGDLTEQPGPQLGHGLSPWLLDGRRTKEHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21348; Mature: 21348

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSP
CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IGTAFWTSLPGVLGGHADAGLPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQR
HHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQAAPTPAPVQRTPGDLTEQPGP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QLGHGLSPWLLDGRRTKEHR
HHCCCCCCHHCCCCCCCCCC
>Mature Secondary Structure
MQRERRRDPYPWTWEIPVAVALATLFVIVIGIQLGRSVANLLAGAGWTWPDANAGAFPSP
CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
IGTAFWTSLPGVLGGHADAGLPSPTPDGLAGRGLVWVSLALAEVALLTATIWVGAWAYQR
HHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WGPGRMRGMATAAEAEKLLGVTRLRKVAGIVRPDLHGKQAAPTPAPVQRTPGDLTEQPGP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
QLGHGLSPWLLDGRRTKEHR
HHCCCCCCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA