Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716452

Identifier: 119716452

GI number: 119716452

Start: 2371632

End: 2372543

Strand: Direct

Name: 119716452

Synonym: Noca_2224

Alternate gene names: NA

Gene position: 2371632-2372543 (Clockwise)

Preceding gene: 119716451

Following gene: 119716453

Centisome position: 47.57

GC content: 69.19

Gene sequence:

>912_bases
ATGACCGGCTTGCAGATCGCGCTCGCCAGCGGCACCCTCATCGGACTGGCCCTCGCCCTGCTCGTATGGCGCATCGCGCC
CTCCGACCCCGACCTGGTCGACGCGCTGGACCGTCTCTCACCTGACCACGTCGTGCCCCGCCGCAACACTCCCGGCCTCG
ACGTCGACACCGGCACCGGCTCGGCGGTCGATCGGATCGGCTTGTGGGCGATGAAGAACCTGCCCGGCGGCGCCTGGGCC
CACACGCCTCGCAAGGACCTGGCCATCCTGCAGATCAGCGAGACCCGGTTCTACGGCGAGAAGGTCGTCTGGGCTGCGCT
CGGCCTGATCATGCCGCCGCTGCTGGCCGCCTTCTTCACTCTGATCGGCCTTCCGCTGCCGTTCGCCATTCCGACGCTCG
GCTCGCTGGCCCTGGCAGCCCTGTTCTGGTTCATGCCCAACTACAACGCCGCCGACGATGCCAAGAAGGCCCGCATCGAG
TTCAGCCGCGCCCTGGGCGCCTACATCGACATGGTGGCCACCGGCGTCCGCGACGGATCCAGCGGCCAGCAGGCGCTGCG
CTCGGCAGCCGAGGTCGGCGACAAGTGGGTCTTCAAGCGGATCGAGAGCGAGCTGCGCCGCGCCCGCTACATGACCCGCG
CACCCTGGGACTCCCTGCACGGTCTCGCCGACGAGCTCGCCGTCCCCGAGCTCGATGACCTCGCCGACATCATGCAGCAG
TCCGGCCAGGACGGAGCCCAGATCTACAACAACCTCCGGGCCCGCGCCGCCGCACTCCGCTCGGCGATGCTCAGCGCCGA
GGTCGGCAAGGCCAACGCCACCTCCGAGCGCATGTACATCCCAGCCAGCCTGCTCGGCATCGTCTTCATGGCGATCCTCG
TCACCCCCTCCCTGCTCCGCTTCACCACCTGA

Upstream 100 bases:

>100_bases
CTGTCGCCAAGCCGCTCCCGCGGTTCCTCGACCTCCAGGCCCGCAACGCCCACCGCGCCGCCCAGCGCACGGCACCGGGC
GAGAAGGAAGGAGCGCTCGC

Downstream 100 bases:

>100_bases
CCGACCTAACACCGACCCCAAAGAACCAGGGTCACCCAGACCGCCAACCGAACAACCAGGAAGGAAGAACCCCGATGTTG
AAGCTCTTCATCGCCCTCCA

Product: type II secretion system protein

Products: NA

Alternate protein names: Integral Membrane Protein; Type II Secretion System F Domain-Containing Protein; Membrane Associated Protein

Number of amino acids: Translated: 303; Mature: 302

Protein sequence:

>303_residues
MTGLQIALASGTLIGLALALLVWRIAPSDPDLVDALDRLSPDHVVPRRNTPGLDVDTGTGSAVDRIGLWAMKNLPGGAWA
HTPRKDLAILQISETRFYGEKVVWAALGLIMPPLLAAFFTLIGLPLPFAIPTLGSLALAALFWFMPNYNAADDAKKARIE
FSRALGAYIDMVATGVRDGSSGQQALRSAAEVGDKWVFKRIESELRRARYMTRAPWDSLHGLADELAVPELDDLADIMQQ
SGQDGAQIYNNLRARAAALRSAMLSAEVGKANATSERMYIPASLLGIVFMAILVTPSLLRFTT

Sequences:

>Translated_303_residues
MTGLQIALASGTLIGLALALLVWRIAPSDPDLVDALDRLSPDHVVPRRNTPGLDVDTGTGSAVDRIGLWAMKNLPGGAWA
HTPRKDLAILQISETRFYGEKVVWAALGLIMPPLLAAFFTLIGLPLPFAIPTLGSLALAALFWFMPNYNAADDAKKARIE
FSRALGAYIDMVATGVRDGSSGQQALRSAAEVGDKWVFKRIESELRRARYMTRAPWDSLHGLADELAVPELDDLADIMQQ
SGQDGAQIYNNLRARAAALRSAMLSAEVGKANATSERMYIPASLLGIVFMAILVTPSLLRFTT
>Mature_302_residues
TGLQIALASGTLIGLALALLVWRIAPSDPDLVDALDRLSPDHVVPRRNTPGLDVDTGTGSAVDRIGLWAMKNLPGGAWAH
TPRKDLAILQISETRFYGEKVVWAALGLIMPPLLAAFFTLIGLPLPFAIPTLGSLALAALFWFMPNYNAADDAKKARIEF
SRALGAYIDMVATGVRDGSSGQQALRSAAEVGDKWVFKRIESELRRARYMTRAPWDSLHGLADELAVPELDDLADIMQQS
GQDGAQIYNNLRARAAALRSAMLSAEVGKANATSERMYIPASLLGIVFMAILVTPSLLRFTT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32726; Mature: 32595

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLQIALASGTLIGLALALLVWRIAPSDPDLVDALDRLSPDHVVPRRNTPGLDVDTGTG
CCCCEEEHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
SAVDRIGLWAMKNLPGGAWAHTPRKDLAILQISETRFYGEKVVWAALGLIMPPLLAAFFT
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGLPLPFAIPTLGSLALAALFWFMPNYNAADDAKKARIEFSRALGAYIDMVATGVRDGS
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SGQQALRSAAEVGDKWVFKRIESELRRARYMTRAPWDSLHGLADELAVPELDDLADIMQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
SGQDGAQIYNNLRARAAALRSAMLSAEVGKANATSERMYIPASLLGIVFMAILVTPSLLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHH
FTT
HCC
>Mature Secondary Structure 
TGLQIALASGTLIGLALALLVWRIAPSDPDLVDALDRLSPDHVVPRRNTPGLDVDTGTG
CCCEEEHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
SAVDRIGLWAMKNLPGGAWAHTPRKDLAILQISETRFYGEKVVWAALGLIMPPLLAAFFT
HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIGLPLPFAIPTLGSLALAALFWFMPNYNAADDAKKARIEFSRALGAYIDMVATGVRDGS
HHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SGQQALRSAAEVGDKWVFKRIESELRRARYMTRAPWDSLHGLADELAVPELDDLADIMQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHH
SGQDGAQIYNNLRARAAALRSAMLSAEVGKANATSERMYIPASLLGIVFMAILVTPSLLR
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHH
FTT
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA