Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716417

Identifier: 119716417

GI number: 119716417

Start: 2339053

End: 2339835

Strand: Direct

Name: 119716417

Synonym: Noca_2187

Alternate gene names: NA

Gene position: 2339053-2339835 (Clockwise)

Preceding gene: 119716409

Following gene: 119716418

Centisome position: 46.91

GC content: 69.99

Gene sequence:

>783_bases
ATGAATCCCACCGCACGCGACTCCTCGGCAGCCGCGCACCTCACCGCGTTGGGCTCGTCCGTGCGACAGCTCCGCGCCGT
CGTCGAGCCGCTGGGGGGCGACGACCTGACCAGCGGTGCCTACACCAGCGAGTGGAGCGTCGCGGACGTGCTGTCACACC
TCGGCTCCGGGGCAGTCATCAGCATGCGCCGCCTCGAGGACACGCTCGCCGGTCGGCCGACACCGGACGACCACGCCCCA
GGAGTGTGGGAGGAGTGGAACGCCAAGACGCCGATGCAGCAGCGGAGCGACGCGCTGGAGGCGGACACTCGGCTCCTGAC
CAGTCTGAAGCAGGTGCCGCTGGATTCCCTTGATGAGCTCTCGTTCCCGATGGGCCCGATGACGTTGACGTTCACCGACT
TCGTCGCGATGCGCCTCAACGAGCACGTCTTCCACACCTGGGACATCGCGGTCGTGACCGAGCCGTCGGCGACCCTGCTT
CCGGACGGCGCAGCGCTGGTGGTGGACAACCTCGGCCTTGTCGCGCGCTTCACCGCGCGGCCCACCGGCGACACCTGCAC
CATCACCGTGCGCACGTCCGCGCCCACGCGCACGTTCTCGGTGGACCTGACCCCGGATGCCGCTGCCCTGCGCACGGTTG
ACCCCGAGGTTGAAGCCGAGGTGGAGCTGCCGGCAGAGGCCTTCGCACGTCTCGTCTACGGCCGCCTGGACCCCGACCAC
ACGCCGCCTGGCCAGCACGGCGACGCGCTCGACCAGCTGCGGCACGTGTTTCCGGGCCCATGA

Upstream 100 bases:

>100_bases
TGGGGACTATTCCCCACTTTTGTCGTAGAGTTCCGTCCATGACCCACCACGTTGCTCGTCCTGCACCGTTCGACCTCGAC
GACCCGAACGGTGGCCGGCG

Downstream 100 bases:

>100_bases
CGCCCCGCGGCTGGAATCGGTGGTCGGGCCCCGGCCCGCGGGGCGCGAACGCCGCTCCTGGCAGGAGCGAACGACCGTGG
ACACGACTCGGCATCATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MNPTARDSSAAAHLTALGSSVRQLRAVVEPLGGDDLTSGAYTSEWSVADVLSHLGSGAVISMRRLEDTLAGRPTPDDHAP
GVWEEWNAKTPMQQRSDALEADTRLLTSLKQVPLDSLDELSFPMGPMTLTFTDFVAMRLNEHVFHTWDIAVVTEPSATLL
PDGAALVVDNLGLVARFTARPTGDTCTITVRTSAPTRTFSVDLTPDAAALRTVDPEVEAEVELPAEAFARLVYGRLDPDH
TPPGQHGDALDQLRHVFPGP

Sequences:

>Translated_260_residues
MNPTARDSSAAAHLTALGSSVRQLRAVVEPLGGDDLTSGAYTSEWSVADVLSHLGSGAVISMRRLEDTLAGRPTPDDHAP
GVWEEWNAKTPMQQRSDALEADTRLLTSLKQVPLDSLDELSFPMGPMTLTFTDFVAMRLNEHVFHTWDIAVVTEPSATLL
PDGAALVVDNLGLVARFTARPTGDTCTITVRTSAPTRTFSVDLTPDAAALRTVDPEVEAEVELPAEAFARLVYGRLDPDH
TPPGQHGDALDQLRHVFPGP
>Mature_260_residues
MNPTARDSSAAAHLTALGSSVRQLRAVVEPLGGDDLTSGAYTSEWSVADVLSHLGSGAVISMRRLEDTLAGRPTPDDHAP
GVWEEWNAKTPMQQRSDALEADTRLLTSLKQVPLDSLDELSFPMGPMTLTFTDFVAMRLNEHVFHTWDIAVVTEPSATLL
PDGAALVVDNLGLVARFTARPTGDTCTITVRTSAPTRTFSVDLTPDAAALRTVDPEVEAEVELPAEAFARLVYGRLDPDH
TPPGQHGDALDQLRHVFPGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27955; Mature: 27955

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPTARDSSAAAHLTALGSSVRQLRAVVEPLGGDDLTSGAYTSEWSVADVLSHLGSGAVI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEE
SMRRLEDTLAGRPTPDDHAPGVWEEWNAKTPMQQRSDALEADTRLLTSLKQVPLDSLDEL
EHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
SFPMGPMTLTFTDFVAMRLNEHVFHTWDIAVVTEPSATLLPDGAALVVDNLGLVARFTAR
CCCCCCEEEHHHHHHHHHHCCCEEEEEEEEEEECCCCEECCCCCEEEEECCCEEEEEECC
PTGDTCTITVRTSAPTRTFSVDLTPDAAALRTVDPEVEAEVELPAEAFARLVYGRLDPDH
CCCCEEEEEEECCCCCEEEEEEECCCHHHHEECCCCCCEEEECCHHHHHHHHHHCCCCCC
TPPGQHGDALDQLRHVFPGP
CCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MNPTARDSSAAAHLTALGSSVRQLRAVVEPLGGDDLTSGAYTSEWSVADVLSHLGSGAVI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEE
SMRRLEDTLAGRPTPDDHAPGVWEEWNAKTPMQQRSDALEADTRLLTSLKQVPLDSLDEL
EHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHC
SFPMGPMTLTFTDFVAMRLNEHVFHTWDIAVVTEPSATLLPDGAALVVDNLGLVARFTAR
CCCCCCEEEHHHHHHHHHHCCCEEEEEEEEEEECCCCEECCCCCEEEEECCCEEEEEECC
PTGDTCTITVRTSAPTRTFSVDLTPDAAALRTVDPEVEAEVELPAEAFARLVYGRLDPDH
CCCCEEEEEEECCCCCEEEEEEECCCHHHHEECCCCCCEEEECCHHHHHHHHHHCCCCCC
TPPGQHGDALDQLRHVFPGP
CCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA