| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is mhpD2 [H]
Identifier: 119716382
GI number: 119716382
Start: 2300416
End: 2301231
Strand: Reverse
Name: mhpD2 [H]
Synonym: Noca_2151
Alternate gene names: 119716382
Gene position: 2301231-2300416 (Counterclockwise)
Preceding gene: 119716383
Following gene: 119716381
Centisome position: 46.16
GC content: 64.09
Gene sequence:
>816_bases ATGAACCAACCAAGCGCGGCTCAAGCCACATCAGCGATACAGGACGCGGCCGACCGGCTGTCTGCCGCCGAGCAGACGAG GAAGCCCTGCGCCCCGGTTCGTGACCTCATCGGCGCCGATGGCGCACGGGCCTACGAGGTGCAGCGCCGCAACGTTGAGC GCCGCAAACAAAGGGGCGCGAGGGTCGTCGGAGCCAAGATCGGACTAACATCGCCTGCGGTCCAAAGACAACTCGGTGTC GACCAACCCGATTTCGGGATCCTCTTCGACGACATGGAGGTTTCGGGCGCAGCCACCATTGATTCGACGCGGCTGCTGCA ACCCCGCATCGAGGCCGAGGTTGCGTTTATTCTCAAGTCCGACCTAGACGGCCCCAATCTCGACGCTGGCTCAGCGCGGG CGGCAGTCGACTACGCAGTGCCGGCCCTGGAGATCGTCGACAGTCGAGTCGAGTCCTGGGATATCACCTTCGTGGACACC GTCGCCGACAACGCGTCGAGCTGCATGTACGTACTCGGGGCGCAACGCCGGAGCCTCGACAGCTTCGAACCTCGGGAGGT CACGATGGAGATGACGGTCGACGGAGCTATGGCTTCGTCTGGCTCTGGCATCGACTGCCTCGGGGATCCGCTCGAGGCCC TCGCGTGGCTCGCCCGCACGATGAGAGATCTCGGGACGCCCTTGCGCAAGGACCAGGTCGTTCTCTCGGGTGCTCTCGGT CCAATGGTCACCGTTCACCCGGGTATGACGGCCGTGGCCAACATCAACGGTCTCGGGACCGTGTCCGCATCTTTCGGCAT AGGAGAGAAGCCGTGA
Upstream 100 bases:
>100_bases CGCCACCACTTCGCCATCCGTTTCGACTATCGGAATGATGCGATGGCGCCGCCCGCCCCCACGTCACACAGTGGTCACGC TCACATGACGAGAGGTGACC
Downstream 100 bases:
>100_bases CTGCATCAACGATTCCCCGTCAAATCGCCATCATCGGCTCCGGCAACATCGGTACTGATCTGATGATTAAGGTTCTGCGG CTATCAAAGACGCTTGAGGT
Product: 4-oxalocrotonate decarboxylase
Products: NA
Alternate protein names: 2-hydroxypentadienoic acid hydratase 2 [H]
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MNQPSAAQATSAIQDAADRLSAAEQTRKPCAPVRDLIGADGARAYEVQRRNVERRKQRGARVVGAKIGLTSPAVQRQLGV DQPDFGILFDDMEVSGAATIDSTRLLQPRIEAEVAFILKSDLDGPNLDAGSARAAVDYAVPALEIVDSRVESWDITFVDT VADNASSCMYVLGAQRRSLDSFEPREVTMEMTVDGAMASSGSGIDCLGDPLEALAWLARTMRDLGTPLRKDQVVLSGALG PMVTVHPGMTAVANINGLGTVSASFGIGEKP
Sequences:
>Translated_271_residues MNQPSAAQATSAIQDAADRLSAAEQTRKPCAPVRDLIGADGARAYEVQRRNVERRKQRGARVVGAKIGLTSPAVQRQLGV DQPDFGILFDDMEVSGAATIDSTRLLQPRIEAEVAFILKSDLDGPNLDAGSARAAVDYAVPALEIVDSRVESWDITFVDT VADNASSCMYVLGAQRRSLDSFEPREVTMEMTVDGAMASSGSGIDCLGDPLEALAWLARTMRDLGTPLRKDQVVLSGALG PMVTVHPGMTAVANINGLGTVSASFGIGEKP >Mature_271_residues MNQPSAAQATSAIQDAADRLSAAEQTRKPCAPVRDLIGADGARAYEVQRRNVERRKQRGARVVGAKIGLTSPAVQRQLGV DQPDFGILFDDMEVSGAATIDSTRLLQPRIEAEVAFILKSDLDGPNLDAGSARAAVDYAVPALEIVDSRVESWDITFVDT VADNASSCMYVLGAQRRSLDSFEPREVTMEMTVDGAMASSGSGIDCLGDPLEALAWLARTMRDLGTPLRKDQVVLSGALG PMVTVHPGMTAVANINGLGTVSASFGIGEKP
Specific function: Catalyzes the conversion of 2-hydroxypentadienoic acid (enolic form of 2-oxopent-4-enoate) to 4-hydroxy-2-ketopentanoic acid [H]
COG id: COG3971
COG function: function code Q; 2-keto-4-pentenoate hydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hydratase/decarboxylase family. MhpD subfamily [H]
Homologues:
Organism=Escherichia coli, GI87081722, Length=253, Percent_Identity=49.4071146245059, Blast_Score=232, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002529 - InterPro: IPR011234 [H]
Pfam domain/function: PF01557 FAA_hydrolase [H]
EC number: =4.2.1.80 [H]
Molecular weight: Translated: 28673; Mature: 28673
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPSAAQATSAIQDAADRLSAAEQTRKPCAPVRDLIGADGARAYEVQRRNVERRKQRGA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC RVVGAKIGLTSPAVQRQLGVDQPDFGILFDDMEVSGAATIDSTRLLQPRIEAEVAFILKS EEEEEECCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHCCHHHHHEEEEECC DLDGPNLDAGSARAAVDYAVPALEIVDSRVESWDITFVDTVADNASSCMYVLGAQRRSLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHCCCCCEEEEECCCHHCCC SFEPREVTMEMTVDGAMASSGSGIDCLGDPLEALAWLARTMRDLGTPLRKDQVVLSGALG CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC PMVTVHPGMTAVANINGLGTVSASFGIGEKP CEEEECCCCEEEECCCCCEEEEECCCCCCCC >Mature Secondary Structure MNQPSAAQATSAIQDAADRLSAAEQTRKPCAPVRDLIGADGARAYEVQRRNVERRKQRGA CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC RVVGAKIGLTSPAVQRQLGVDQPDFGILFDDMEVSGAATIDSTRLLQPRIEAEVAFILKS EEEEEECCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCHHHHCCHHHHHEEEEECC DLDGPNLDAGSARAAVDYAVPALEIVDSRVESWDITFVDTVADNASSCMYVLGAQRRSLD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECHHCCCCCEEEEECCCHHCCC SFEPREVTMEMTVDGAMASSGSGIDCLGDPLEALAWLARTMRDLGTPLRKDQVVLSGALG CCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC PMVTVHPGMTAVANINGLGTVSASFGIGEKP CEEEECCCCEEEECCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA