| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716333
Identifier: 119716333
GI number: 119716333
Start: 2246479
End: 2247615
Strand: Reverse
Name: 119716333
Synonym: Noca_2102
Alternate gene names: NA
Gene position: 2247615-2246479 (Counterclockwise)
Preceding gene: 119716334
Following gene: 119716332
Centisome position: 45.08
GC content: 75.11
Gene sequence:
>1137_bases GTGACAAACGCCGCCCCGCCGCGACCGAGCTCGACACGCGCCGGCACCCCACGCGGGCTCCTCCTGCTCCCCGCCGGCCT GGCGATGCTCGCCGGGCTCGACGCCGCGCTGCTCCTCCTCGGGGTGCCGGCGCCGGTGACCACCGACCGGCTTCCCGACG TGCACGGCATGTTGATGGTGCTCGGCTTCGTCGGCACCCTGGTCTGCCTCGAGCGCTCCGTGGCCCTGGGCCGCCCGCTC GGCTACCTCGCGCCGGCGCTGCTCGGCGCCGGCGGCCTGCTGCTGCTCGCCCCGGTCCCGCTCGCGGTCGGGCGCACCGG CCTCTTGCTGGGGATGCTGGCGATGTCGCTCCTCTACGTGCCGCTCTGGCGTCGCCAGCGCGACGATGCCGTGCTCGTCC AGGCCCTCGGCGCGGTGCTCGGCGCCGGCGCCGCCGCGATGTGGCTCGGCGGCGCGCAGACCGCTCTCCTGGTGCCGTGG CTGGCCGGCTTCCTGGTGCTGACCATCGCCGGCGAGCGGCTCGAGCTGGCCCGGCTCGCGATGGGACCGAAGGCCGGCCC GACGCTCGTGCTGCTGTGCCTCACCGTGATGGCGGCGACAGTCGGCTCGCTGCTGTGGCCGGACGTCGGCTATCCGCTGG TCGGCCTCGCCCTGGCCGCCCTCACCGGCTGGCTGGTCGCCCACGACGTCGCCTGGCGGACCGTCCGCCGGGCCGGGCTG ACCCGGTTCATGGCAGCCAGCATGCTGGCCGGGTACTTCTGGCTGCTGGTCGCCGCCGGCACCTGGCTGCTGCACGGCAG CGCGCTCTCGGGCGCGCCGTACGACGTCGTCATCCACGCCACGTTCCTGGGCTTCACGATCTCGATGATCATGGCGCACG CGCCCGTGATCCTCCCGGCCGTGTTGCGTCGCCCGCTGCCGTACCGGACCGTGCTCTGGGCGCCGCTCGTGGTGCTGCAC GCCTCGCTGGTGCTGCGGCTCTGGATCGGTGACGCCCTCGGGGCGCACCTCGCCTGGCAGATCGGCGGGGCCGCGAACGT GGTCGCGCTGCTGTCCTTCTTCGCGCTCGCCGCGTGGTCCGTGCTGGCCGCGGCCCGGCGTCCCAGCACCGTTCCCGCCA AGGAGCGGGCCGCATGA
Upstream 100 bases:
>100_bases CGGGCCGGGATCGGCGTCTTGAGCCTGGCGCTGCTGGTGCTCGGCGTCGCGATCGCGGCGTGAACTCGCTCCGCGGTCGC GCCTTAGATACGATTCTGTC
Downstream 100 bases:
>100_bases CCGTCATCGGGACCAGGAGCCGGCCGGTCGGCTCGGGCGCACGCCGGGGCTTCTCGCCGCTGCGCGACCTCCCCGCTCTG CTCTGGCTCATCGCCGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMVLGFVGTLVCLERSVALGRPL GYLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYVPLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPW LAGFLVLTIAGERLELARLAMGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGL TRFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPAVLRRPLPYRTVLWAPLVVLH ASLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWSVLAAARRPSTVPAKERAA
Sequences:
>Translated_378_residues MTNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMVLGFVGTLVCLERSVALGRPL GYLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYVPLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPW LAGFLVLTIAGERLELARLAMGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGL TRFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPAVLRRPLPYRTVLWAPLVVLH ASLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWSVLAAARRPSTVPAKERAA >Mature_377_residues TNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMVLGFVGTLVCLERSVALGRPLG YLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYVPLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPWL AGFLVLTIAGERLELARLAMGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGLT RFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPAVLRRPLPYRTVLWAPLVVLHA SLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWSVLAAARRPSTVPAKERAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39319; Mature: 39188
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMV CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LGFVGTLVCLERSVALGRPLGYLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYV HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHCCCCHHHCHHHHHHHHHHHHHHHH PLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPWLAGFLVLTIAGERLELARLA HHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH MGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPA HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLRRPLPYRTVLWAPLVVLHASLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VLAAARRPSTVPAKERAA HHHHHCCCCCCCCHHCCC >Mature Secondary Structure TNAAPPRPSSTRAGTPRGLLLLPAGLAMLAGLDAALLLLGVPAPVTTDRLPDVHGMLMV CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH LGFVGTLVCLERSVALGRPLGYLAPALLGAGGLLLLAPVPLAVGRTGLLLGMLAMSLLYV HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEHCCCCHHHCHHHHHHHHHHHHHHHH PLWRRQRDDAVLVQALGAVLGAGAAAMWLGGAQTALLVPWLAGFLVLTIAGERLELARLA HHHHCCCCHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH MGPKAGPTLVLLCLTVMAATVGSLLWPDVGYPLVGLALAALTGWLVAHDVAWRTVRRAGL CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRFMAASMLAGYFWLLVAAGTWLLHGSALSGAPYDVVIHATFLGFTISMIMAHAPVILPA HHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VLRRPLPYRTVLWAPLVVLHASLVLRLWIGDALGAHLAWQIGGAANVVALLSFFALAAWS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VLAAARRPSTVPAKERAA HHHHHCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA