Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119716250

Identifier: 119716250

GI number: 119716250

Start: 2161203

End: 2162423

Strand: Direct

Name: 119716250

Synonym: Noca_2018

Alternate gene names: NA

Gene position: 2161203-2162423 (Clockwise)

Preceding gene: 119716249

Following gene: 119716255

Centisome position: 43.35

GC content: 76.49

Gene sequence:

>1221_bases
ATGTTCCTCGACCGGATCGACGGTGGCCGGCGGCTCGCTGCCCTGCTCTCGCACTTCACGGGCACCAACGTCGTGGTCGT
CGGCCTGCCCCGCGGCGGGGTGCCGGTGGCCGCGGAGGTCGCCTACCAGCTGCGCGCGCCGCTGGACGTGATCGTGGTCC
GCAAGCCCGGCCTGCCGGGGGAGCCGGAGCTCACCGACCCCGAGCGCGCCGCCCTGCGCGAGCGCGCCACCCAGCTGCGC
AGCGGCCGGTCCGGCCTGGATCTCTCCGGCCGGGTGGCGCTGATCGTCGACGACGGCATCGCCACCGGTGCCACCGCCGC
GGCCGCCTGCCGGGTGGCGCGCGAGGTGGGCGCGTCGTACGTCGTGGTCGCCGCGCCGGTCGTCGCGCCCGGCATCGACG
CCCGCGACCTGGACGCCGACGAGATCGTGTACGTCGAGATGCCCGCCCGGTTCACCAGCGTGGCGGCCCACTACCAGGAC
TTCCGGCCGACCACCGACGAGCAGGTCGTCCGGCTCCTCGACGGCGGCCGCGGGGACGGCGTCGACCCGAGCGGCCAGAC
GGTGCGGATCCCCGCCGGCGGCGCGATCCTCGCGGGCACCCTGCGGATCCCGGACCACCCGCGAGGGGTCGTGCTGTTCG
CCCACGGCAGCGGCTCCAGCCGGCACAGCCTGCGCAACGTCAAGGTCGCGCGGCGGCTGACGAACGCCGGCTTCGCCACC
CTGCTGCTGGACCTGCTGAGCCCGGCCGAGGAGTCGTCGTGCGACCGCGTCTTCGACGTGGACGGCCTGGCGCACCGGCT
GATCACGGCCACCAACTGGCTGGCCGGCGTCCCGGCGCTCGAGGGCCTGCCGATCGGCTACTTCGGCGCGAGCACGGGCG
CCGCGGCGGCGCTGCGCGCGGCCGCCGCCCTGGACGGCCGGATCACCGCCGTCGTCGCCCGCGGTGGCCGCCCCGACCTG
GCCGGCGACGCGCTGGGCCGGGTCGCTGCACCGACCCTGCTGGTGGTCGGCGGCGCCGACCCCACGGTGCTCGAGCTCAA
CCGCTGGGCGGCGGCCCGGATGCACTGCCCGAGCCAGGTCACCATCGTCCCCGGCGCCACCCACCTGTTCTCCGAGCCGC
ACTCGCTGGAGCGGGTGGCCGAGCTCGCGACCGAGTGGTTCAGCCGGCACCTCACCACCCAGGCGGCGGCCGGCACCGTC
AGCCTCGGCGTCTCCTGCTGA

Upstream 100 bases:

>100_bases
GATGGGGACATTAGGCCCCGGGCCGCCGGGCCATGGGGCTCTGTCTCGTACGTCACTCCCCGGGTGAACGTGGAGGGGAC
AGAACGGAGGTGTCCACGAG

Downstream 100 bases:

>100_bases
GCCGCGGCCGCACCGCCCGCTCCAGCCGGGTGTAGGCGCAGCAGCACGCCACGCCCACCGCCAGCGAGGCGCCGATCGCG
AGCGCGGGCCGCCCGGCCGC

Product: phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 406

Protein sequence:

>406_residues
MFLDRIDGGRRLAALLSHFTGTNVVVVGLPRGGVPVAAEVAYQLRAPLDVIVVRKPGLPGEPELTDPERAALRERATQLR
SGRSGLDLSGRVALIVDDGIATGATAAAACRVAREVGASYVVVAAPVVAPGIDARDLDADEIVYVEMPARFTSVAAHYQD
FRPTTDEQVVRLLDGGRGDGVDPSGQTVRIPAGGAILAGTLRIPDHPRGVVLFAHGSGSSRHSLRNVKVARRLTNAGFAT
LLLDLLSPAEESSCDRVFDVDGLAHRLITATNWLAGVPALEGLPIGYFGASTGAAAALRAAAALDGRITAVVARGGRPDL
AGDALGRVAAPTLLVVGGADPTVLELNRWAAARMHCPSQVTIVPGATHLFSEPHSLERVAELATEWFSRHLTTQAAAGTV
SLGVSC

Sequences:

>Translated_406_residues
MFLDRIDGGRRLAALLSHFTGTNVVVVGLPRGGVPVAAEVAYQLRAPLDVIVVRKPGLPGEPELTDPERAALRERATQLR
SGRSGLDLSGRVALIVDDGIATGATAAAACRVAREVGASYVVVAAPVVAPGIDARDLDADEIVYVEMPARFTSVAAHYQD
FRPTTDEQVVRLLDGGRGDGVDPSGQTVRIPAGGAILAGTLRIPDHPRGVVLFAHGSGSSRHSLRNVKVARRLTNAGFAT
LLLDLLSPAEESSCDRVFDVDGLAHRLITATNWLAGVPALEGLPIGYFGASTGAAAALRAAAALDGRITAVVARGGRPDL
AGDALGRVAAPTLLVVGGADPTVLELNRWAAARMHCPSQVTIVPGATHLFSEPHSLERVAELATEWFSRHLTTQAAAGTV
SLGVSC
>Mature_406_residues
MFLDRIDGGRRLAALLSHFTGTNVVVVGLPRGGVPVAAEVAYQLRAPLDVIVVRKPGLPGEPELTDPERAALRERATQLR
SGRSGLDLSGRVALIVDDGIATGATAAAACRVAREVGASYVVVAAPVVAPGIDARDLDADEIVYVEMPARFTSVAAHYQD
FRPTTDEQVVRLLDGGRGDGVDPSGQTVRIPAGGAILAGTLRIPDHPRGVVLFAHGSGSSRHSLRNVKVARRLTNAGFAT
LLLDLLSPAEESSCDRVFDVDGLAHRLITATNWLAGVPALEGLPIGYFGASTGAAAALRAAAALDGRITAVVARGGRPDL
AGDALGRVAAPTLLVVGGADPTVLELNRWAAARMHCPSQVTIVPGATHLFSEPHSLERVAELATEWFSRHLTTQAAAGTV
SLGVSC

Specific function: Unknown

COG id: COG1926

COG function: function code R; Predicted phosphoribosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the dienelactone hydrolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925
- InterPro:   IPR000836 [H]

Pfam domain/function: PF01738 DLH; PF00156 Pribosyltran [H]

EC number: NA

Molecular weight: Translated: 42161; Mature: 42161

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLDRIDGGRRLAALLSHFTGTNVVVVGLPRGGVPVAAEVAYQLRAPLDVIVVRKPGLPG
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCC
EPELTDPERAALRERATQLRSGRSGLDLSGRVALIVDDGIATGATAAAACRVAREVGASY
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCE
VVVAAPVVAPGIDARDLDADEIVYVEMPARFTSVAAHYQDFRPTTDEQVVRLLDGGRGDG
EEEECCHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
VDPSGQTVRIPAGGAILAGTLRIPDHPRGVVLFAHGSGSSRHSLRNVKVARRLTNAGFAT
CCCCCCEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHH
LLLDLLSPAEESSCDRVFDVDGLAHRLITATNWLAGVPALEGLPIGYFGASTGAAAALRA
HHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHH
AAALDGRITAVVARGGRPDLAGDALGRVAAPTLLVVGGADPTVLELNRWAAARMHCPSQV
HHHCCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEECCHHHHHHCCCCEE
TIVPGATHLFSEPHSLERVAELATEWFSRHLTTQAAAGTVSLGVSC
EEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
>Mature Secondary Structure
MFLDRIDGGRRLAALLSHFTGTNVVVVGLPRGGVPVAAEVAYQLRAPLDVIVVRKPGLPG
CCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCC
EPELTDPERAALRERATQLRSGRSGLDLSGRVALIVDDGIATGATAAAACRVAREVGASY
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCE
VVVAAPVVAPGIDARDLDADEIVYVEMPARFTSVAAHYQDFRPTTDEQVVRLLDGGRGDG
EEEECCHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCC
VDPSGQTVRIPAGGAILAGTLRIPDHPRGVVLFAHGSGSSRHSLRNVKVARRLTNAGFAT
CCCCCCEEEECCCCEEEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHH
LLLDLLSPAEESSCDRVFDVDGLAHRLITATNWLAGVPALEGLPIGYFGASTGAAAALRA
HHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHH
AAALDGRITAVVARGGRPDLAGDALGRVAAPTLLVVGGADPTVLELNRWAAARMHCPSQV
HHHCCCCEEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEECCHHHHHHCCCCEE
TIVPGATHLFSEPHSLERVAELATEWFSRHLTTQAAAGTVSLGVSC
EEECCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]