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The map label for this gene is comEA [H]

Identifier: 119716118

GI number: 119716118

Start: 2011314

End: 2012216

Strand: Direct

Name: comEA [H]

Synonym: Noca_1886

Alternate gene names: 119716118

Gene position: 2011314-2012216 (Clockwise)

Preceding gene: 119716117

Following gene: 119716119

Centisome position: 40.34

GC content: 77.85

Gene sequence:

>903_bases
ATGCCCACCACCCGACCCGTCCGTCCTCGCCCCGAGCGTCAGGAGGTCGTCGCCCGCCGGCTCGCGTTGCTGCACGCCGA
GCTGGCGGGTGCCCGCCCGCCGGCCCCGCCGCCCGACCCGCCCCCTGCGCCACTGGCCGAACCACTGGCCGAACCCCTGG
CCGAACCCCTGGCCGAACTCCTGGCCGAGCCGCCCGCGGTGCCCGTCCCCGGACGGCACGCCTCCCGGCGACCCGGACGT
TCGGTCGCCGTGCTGCCTGCGACCCTGCGCGGTCGGGTGGCCCTGGGGCCGGCGCAGCTGGCGGTCGTCGCGCTGGTCGT
CGCCCTCGGGCTCGGCGTGACGAGCTGGTGGGTGGTCCGCGGGGACGCCGATCGGCTCGAGGCGCCCGCGCTCGAGCCGA
CCGGCGCGGCCCTGGTCAGCGAGGGGCCGCTCTCTGACGCCTCCCCGGTCGCCGCTGAGGCCACGGCTTCCCCTGCGACG
GTCACCGTGGACGTGACCGGGAAGGTGCGCCGGCCCGGGATCGTCGTGCTCGACACCGGCGCCCGGGTCGTGGACGCCCT
CGAGGCGGCCGGAGGCGCCCGTCGGGGCGTCGACCTCTCCGGGCTGAACCTCGCCCGGGTCCTCGTCGACGGCGAGCAGG
TCGTGGTGGGGGAGCCGGCGCCCACGCCGCTCGGGGCGGCCGCGGTGCCGACCCCCGGGGCGCCAGGCGGGCCACTGGTC
GACCTCAACACCGCCACCCAGGCCGAGCTCGAGGCGCTGCCGGAGGTCGGCCCCGTCACGGCACAGGCGATCCTCGCGTG
GCGCGACGAGCACGGTGGCTTCACCTCGGTCGACGAGCTCCTGGAGGTCGACGGCATCGGCGACGCGACGCTCGGGCAGC
TCGCCCCGTTCGTGACGGTCTGA

Upstream 100 bases:

>100_bases
GGGCCCGCGCGGCGTCCACAGGGCGGTGCTGCGGCACGACCGTCCACATCCGCCCGCGCCGACGCGGGCCGCGGTCCGCG
CCCCTGCCTAGCGTCGCGGC

Downstream 100 bases:

>100_bases
GCACGTGGCCGAGGTCCAGCGCCGCCGACCGCCGGACCTGCGGATGCTGCTGCTCGGCGGCGTGGCGTGGGGCGGGGCTC
TGGCAGCCCGTGCGCTCGGA

Product: helix-hairpin-helix repeat-containing competence protein ComEA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MPTTRPVRPRPERQEVVARRLALLHAELAGARPPAPPPDPPPAPLAEPLAEPLAEPLAELLAEPPAVPVPGRHASRRPGR
SVAVLPATLRGRVALGPAQLAVVALVVALGLGVTSWWVVRGDADRLEAPALEPTGAALVSEGPLSDASPVAAEATASPAT
VTVDVTGKVRRPGIVVLDTGARVVDALEAAGGARRGVDLSGLNLARVLVDGEQVVVGEPAPTPLGAAAVPTPGAPGGPLV
DLNTATQAELEALPEVGPVTAQAILAWRDEHGGFTSVDELLEVDGIGDATLGQLAPFVTV

Sequences:

>Translated_300_residues
MPTTRPVRPRPERQEVVARRLALLHAELAGARPPAPPPDPPPAPLAEPLAEPLAEPLAELLAEPPAVPVPGRHASRRPGR
SVAVLPATLRGRVALGPAQLAVVALVVALGLGVTSWWVVRGDADRLEAPALEPTGAALVSEGPLSDASPVAAEATASPAT
VTVDVTGKVRRPGIVVLDTGARVVDALEAAGGARRGVDLSGLNLARVLVDGEQVVVGEPAPTPLGAAAVPTPGAPGGPLV
DLNTATQAELEALPEVGPVTAQAILAWRDEHGGFTSVDELLEVDGIGDATLGQLAPFVTV
>Mature_299_residues
PTTRPVRPRPERQEVVARRLALLHAELAGARPPAPPPDPPPAPLAEPLAEPLAEPLAELLAEPPAVPVPGRHASRRPGRS
VAVLPATLRGRVALGPAQLAVVALVVALGLGVTSWWVVRGDADRLEAPALEPTGAALVSEGPLSDASPVAAEATASPATV
TVDVTGKVRRPGIVVLDTGARVVDALEAAGGARRGVDLSGLNLARVLVDGEQVVVGEPAPTPLGAAAVPTPGAPGGPLVD
LNTATQAELEALPEVGPVTAQAILAWRDEHGGFTSVDELLEVDGIGDATLGQLAPFVTV

Specific function: Needed for both DNA binding and transport. It is absolutely required for the uptake of transforming DNA but not for binding. Its role in binding may be indirect [H]

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HhH domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004787
- InterPro:   IPR004509
- InterPro:   IPR000445
- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR019554 [H]

Pfam domain/function: PF00633 HHH; PF10531 SLBB [H]

EC number: NA

Molecular weight: Translated: 30361; Mature: 30230

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTRPVRPRPERQEVVARRLALLHAELAGARPPAPPPDPPPAPLAEPLAEPLAEPLAEL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LAEPPAVPVPGRHASRRPGRSVAVLPATLRGRVALGPAQLAVVALVVALGLGVTSWWVVR
HCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCEEEECHHHHHHHHHHHHHHCCCCEEEEEE
GDADRLEAPALEPTGAALVSEGPLSDASPVAAEATASPATVTVDVTGKVRRPGIVVLDTG
CCHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCEEEEECC
ARVVDALEAAGGARRGVDLSGLNLARVLVDGEQVVVGEPAPTPLGAAAVPTPGAPGGPLV
HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEE
DLNTATQAELEALPEVGPVTAQAILAWRDEHGGFTSVDELLEVDGIGDATLGQLAPFVTV
ECCCCHHHHHHHCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHCCCCCHHHHHHCCHHCC
>Mature Secondary Structure 
PTTRPVRPRPERQEVVARRLALLHAELAGARPPAPPPDPPPAPLAEPLAEPLAEPLAEL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LAEPPAVPVPGRHASRRPGRSVAVLPATLRGRVALGPAQLAVVALVVALGLGVTSWWVVR
HCCCCCCCCCCCCCCCCCCCEEEEEEHHHCCEEEECHHHHHHHHHHHHHHCCCCEEEEEE
GDADRLEAPALEPTGAALVSEGPLSDASPVAAEATASPATVTVDVTGKVRRPGIVVLDTG
CCHHHCCCCCCCCCCCEEEECCCCCCCCCCCHHCCCCCCEEEEEECCCCCCCCEEEEECC
ARVVDALEAAGGARRGVDLSGLNLARVLVDGEQVVVGEPAPTPLGAAAVPTPGAPGGPLV
HHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEE
DLNTATQAELEALPEVGPVTAQAILAWRDEHGGFTSVDELLEVDGIGDATLGQLAPFVTV
ECCCCHHHHHHHCCCCCCHHHHHHEEEECCCCCCCCHHHHHHHCCCCCHHHHHHCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7968523; 8969508; 9384377; 7768800 [H]