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The map label for this gene is 119716117

Identifier: 119716117

GI number: 119716117

Start: 2010336

End: 2011190

Strand: Direct

Name: 119716117

Synonym: Noca_1885

Alternate gene names: NA

Gene position: 2010336-2011190 (Clockwise)

Preceding gene: 119716116

Following gene: 119716118

Centisome position: 40.32

GC content: 75.44

Gene sequence:

>855_bases
ATGCCGGTCGTCATCGTCACCGACTCGACCGCCAGCCTTCCTCCGGAGGTGGCGGCCGAGCGCGGCGTGCGGGTGGTGCC
GTTGCAGGTGGTGATCGGAGCCACCGTGTACGACGAGGGCGCCGACGGCGCGACCCCGGAGCTGGTGGCGGCCGCACTCA
AGGACTGGCTGCCGGTCAGCACGTCCCGGCCCGGGCCGGCGGCGCTCCTGGAGGTCTACGAGCAGGCGGCCCGGGACGGC
GCCACCGAGGTCGTCTCGATCCACCTGTCCGGCCAGATGAGCGGCACCTTCGAGTCCGCCCAACTGGCCGCGCGCGACGC
CTCGATCCCGGTGCTCCCGGTCGACACCCGCCAGGTCGGGGTGGCGACCGGGTACGCCGTGCTCGCGGCCGCCGACGTCC
TCGACGCCGGGGGAGACGCGGAGGCTGCCGCGGAGGCGGCCCGGGCCCGGGCCGAGCTCTCGGCCTCGTTGTTCTACGTC
GACACCTTGGAGTACCTGCGCCGTGGCGGCCGGATCGGCAAGGCGGCGGCCCTGCTCGGCGGCGCCCTGTCCGTGAAACC
GCTGCTCCAGATCGAGGACGGCGTGGTCGCCTCGCTGGAGCGGGTCCGCACCTCGGCGCGTGCGCTCGCGCGCCTGGAGG
AGCTCGCCGTGCTGGCGGCCGGCGAGGTGCCGGTGGACGTCTCCGTGGCACACCTGGCCAATCCCGAGCGCGCGGGCCAG
CTCGCCGAGCGGCTCGCGCACCGCCTCGAGGCCAACCTCGAGGGCCGGGAGGTCTGGTGTGGCGAGCTCGGCGCGGTGCT
GGGCGCCCACGTCGGCCCCGGCATGATCGCGGTCTGCGTGGCGCCTCGGCTCTGA

Upstream 100 bases:

>100_bases
GTGGTCCGGGCGATCGACGGGCGCCCGGTGCGCAAGGTGATCGTCCGGGCGCCGAAGCTGGTCAACGTCGTCGTCTAGGA
CCGTGCCCTAGCCTTCGGGC

Downstream 100 bases:

>100_bases
CCCGAGGGCGGGCGTCGGCTACGGGGCCCGCGCGGCGTCCACAGGGCGGTGCTGCGGCACGACCGTCCACATCCGCCCGC
GCCGACGCGGGCCGCGGTCC

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MPVVIVTDSTASLPPEVAAERGVRVVPLQVVIGATVYDEGADGATPELVAAALKDWLPVSTSRPGPAALLEVYEQAARDG
ATEVVSIHLSGQMSGTFESAQLAARDASIPVLPVDTRQVGVATGYAVLAAADVLDAGGDAEAAAEAARARAELSASLFYV
DTLEYLRRGGRIGKAAALLGGALSVKPLLQIEDGVVASLERVRTSARALARLEELAVLAAGEVPVDVSVAHLANPERAGQ
LAERLAHRLEANLEGREVWCGELGAVLGAHVGPGMIAVCVAPRL

Sequences:

>Translated_284_residues
MPVVIVTDSTASLPPEVAAERGVRVVPLQVVIGATVYDEGADGATPELVAAALKDWLPVSTSRPGPAALLEVYEQAARDG
ATEVVSIHLSGQMSGTFESAQLAARDASIPVLPVDTRQVGVATGYAVLAAADVLDAGGDAEAAAEAARARAELSASLFYV
DTLEYLRRGGRIGKAAALLGGALSVKPLLQIEDGVVASLERVRTSARALARLEELAVLAAGEVPVDVSVAHLANPERAGQ
LAERLAHRLEANLEGREVWCGELGAVLGAHVGPGMIAVCVAPRL
>Mature_283_residues
PVVIVTDSTASLPPEVAAERGVRVVPLQVVIGATVYDEGADGATPELVAAALKDWLPVSTSRPGPAALLEVYEQAARDGA
TEVVSIHLSGQMSGTFESAQLAARDASIPVLPVDTRQVGVATGYAVLAAADVLDAGGDAEAAAEAARARAELSASLFYVD
TLEYLRRGGRIGKAAALLGGALSVKPLLQIEDGVVASLERVRTSARALARLEELAVLAAGEVPVDVSVAHLANPERAGQL
AERLAHRLEANLEGREVWCGELGAVLGAHVGPGMIAVCVAPRL

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 29154; Mature: 29022

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVVIVTDSTASLPPEVAAERGVRVVPLQVVIGATVYDEGADGATPELVAAALKDWLPVS
CCEEEEECCCCCCCHHHHHHCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCC
TSRPGPAALLEVYEQAARDGATEVVSIHLSGQMSGTFESAQLAARDASIPVLPVDTRQVG
CCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEECCCCHHH
VATGYAVLAAADVLDAGGDAEAAAEAARARAELSASLFYVDTLEYLRRGGRIGKAAALLG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
GALSVKPLLQIEDGVVASLERVRTSARALARLEELAVLAAGEVPVDVSVAHLANPERAGQ
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHCCHHHHHH
LAERLAHRLEANLEGREVWCGELGAVLGAHVGPGMIAVCVAPRL
HHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure 
PVVIVTDSTASLPPEVAAERGVRVVPLQVVIGATVYDEGADGATPELVAAALKDWLPVS
CEEEEECCCCCCCHHHHHHCCCEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCC
TSRPGPAALLEVYEQAARDGATEVVSIHLSGQMSGTFESAQLAARDASIPVLPVDTRQVG
CCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCEEECCCCHHH
VATGYAVLAAADVLDAGGDAEAAAEAARARAELSASLFYVDTLEYLRRGGRIGKAAALLG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHC
GALSVKPLLQIEDGVVASLERVRTSARALARLEELAVLAAGEVPVDVSVAHLANPERAGQ
CCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHCCHHHHHH
LAERLAHRLEANLEGREVWCGELGAVLGAHVGPGMIAVCVAPRL
HHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12000953 [H]