| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is treS [H]
Identifier: 119716042
GI number: 119716042
Start: 1922208
End: 1923923
Strand: Reverse
Name: treS [H]
Synonym: Noca_1808
Alternate gene names: 119716042
Gene position: 1923923-1922208 (Counterclockwise)
Preceding gene: 119716043
Following gene: 119716041
Centisome position: 38.59
GC content: 67.02
Gene sequence:
>1716_bases GTGACCCAGGGGCTCACGCCGGACCCTCCTGAGAACAACCCCGACTGGTTCAAGAGCGCGGTCTTCTACGAGGTCCTCGT CCGGTCCTTCCGCGACTCCAACGCCGACGGCACCGGCGACTTCCGCGGGCTGGTCGAGCAGCTGGACTACCTCCAGTGGC TCGGCGTGGACTGCCTGTGGATCCCGCCGTTCTTCCCGAGCCCGCTGCGCGACGGCGGCTACGACGTGGCGGACTACACC GGGGTGCTCCCGGAGATCGGCACGATCGAGGACTTCCGCTACTTCCTCGACGAGGCGCACCAGCGCGGCCTGAAGGTCAT CATCGACTTCGTCATGAACCACACGAGCGACCAGCACCCGTGGTTCCAGGCCTCCCGGTCCGACCCGCAGGGGCCGTACG GCGACTTCTACGTCTGGTCCGACACCGACGAGCTCTACGAGGAGGCGCGGATCATCTTCGTCGACACCGAGCCGTCGAAC TGGACGTGGGACCCGGTCCGCCAGCAGTACTTCTGGCACCGCTTCTTCTCCCACCAGCCCGACCTCAACTTCGACAACCC CGCCGTCCACGACGCGATGCTCGACGCGATCCGGTTCTGGCTCAACATGGGTCTGGACGGCTTCCGCCTCGACGCGGTGC CCTACCTCTACGAGCGGCCGGGCACCAACGGCGAGAACCTCCCTGAGACCCACGAGATGCTCAAGAAGGTCCGCAAGGTC GTCGACGACGAGTACCCGGGCCGGATCCTCCTCTGCGAGGCCAACCAGTGGCCGCAGGACGTCGTGGAGTACTTCGGCGA CTTCGCGGTGGGCGGTGACGAGTGCCACATGGCCTTCCACTTCCCGGTGATGCCGCGCATCTTCATGGCGGTGCGCCGGG AGTCCCGGTTCCCGATCTCGGAGATCCTCGAGCAGACCCCCGCGATCCCCGAGAACTGCCAGTGGGGCATCTTCCTGCGC AACCACGACGAGCTCACCCTCGAGATGGTCACCGACGAGGACCGCGACTACATGTGGGGCGAGTACGCCAAGGATCCCCG GATGAAGGCGAACATCGGCATCCGCCGGCGGCTGGCGCCCCTCCTCGACAACGACACCAACCAGATGGAGCTCTTCAACG CGCTGCTGTTCTCGCTGCCGGGCTCCCCGGTCCTCTACTACGGCGACGAGATCGGCATGGGCGACAACATCTGGCTCGGC GACCGGGACGGGGTGCGCACCCCGATGCAGTGGACCTCGGACCGCAACGCCGGATTCTCCTCGGCCAACCCCGGCAAGCT GGACCTGCCGCTCATCCAGGACCCGGTCTTCGGGTACCAGTCGGTCAATGTGGAGGCCCAGCTCGAGAACACCTCGTCCC TGCTGCACTGGATGCGCCGGATGATCCACGCCCGCCGCAACCACCCCGCGTTCGGGCTCGGGACCTTCCACGACCTGGGT GGCTCGAACTCGACCGTGCTGTCCTACGTGCGGGAGTACACCACCGAGGACGGCTCCGAGGACATCATCCTGTGCGTCAA CAACCTCTCCCGGTTCCCCCAGCCGGTCGAGCTGGACCTGCGCCGGTTCGAGGGCCGGCGGCCCGTCGAGCTGATCGGTG GAGTCCCGTTCCCGGAGATCGGCGAGCTGCCCTACCTCCTCACCCTGGCGGGGTACGGCTTCTACTGGTTCCGCCTGACC GCTCCCGAGACCAGCGAGGAGGGGCTGCTGCTGTGA
Upstream 100 bases:
>100_bases ACGAGATCACCGGCGCCGACTGGAGCTGGGGCGAGCACAACTACGTGCGGCTCGACCCGTACCACGAGCCGGCGCACATC TTGAGCGTGAGGAGGCCCCG
Downstream 100 bases:
>100_bases CCCCGGACGGACGAGTGACCCACATCGAGCCGGACGTGTTCGTGCGTTACCTCGAGCGCACCCGGTGGTTCGGCGGCAAG GGCCGCCCCTTCGAGGTCGC
Product: trehalose synthase
Products: NA
Alternate protein names: Maltose alpha-D-glucosyltransferase [H]
Number of amino acids: Translated: 571; Mature: 570
Protein sequence:
>571_residues MTQGLTPDPPENNPDWFKSAVFYEVLVRSFRDSNADGTGDFRGLVEQLDYLQWLGVDCLWIPPFFPSPLRDGGYDVADYT GVLPEIGTIEDFRYFLDEAHQRGLKVIIDFVMNHTSDQHPWFQASRSDPQGPYGDFYVWSDTDELYEEARIIFVDTEPSN WTWDPVRQQYFWHRFFSHQPDLNFDNPAVHDAMLDAIRFWLNMGLDGFRLDAVPYLYERPGTNGENLPETHEMLKKVRKV VDDEYPGRILLCEANQWPQDVVEYFGDFAVGGDECHMAFHFPVMPRIFMAVRRESRFPISEILEQTPAIPENCQWGIFLR NHDELTLEMVTDEDRDYMWGEYAKDPRMKANIGIRRRLAPLLDNDTNQMELFNALLFSLPGSPVLYYGDEIGMGDNIWLG DRDGVRTPMQWTSDRNAGFSSANPGKLDLPLIQDPVFGYQSVNVEAQLENTSSLLHWMRRMIHARRNHPAFGLGTFHDLG GSNSTVLSYVREYTTEDGSEDIILCVNNLSRFPQPVELDLRRFEGRRPVELIGGVPFPEIGELPYLLTLAGYGFYWFRLT APETSEEGLLL
Sequences:
>Translated_571_residues MTQGLTPDPPENNPDWFKSAVFYEVLVRSFRDSNADGTGDFRGLVEQLDYLQWLGVDCLWIPPFFPSPLRDGGYDVADYT GVLPEIGTIEDFRYFLDEAHQRGLKVIIDFVMNHTSDQHPWFQASRSDPQGPYGDFYVWSDTDELYEEARIIFVDTEPSN WTWDPVRQQYFWHRFFSHQPDLNFDNPAVHDAMLDAIRFWLNMGLDGFRLDAVPYLYERPGTNGENLPETHEMLKKVRKV VDDEYPGRILLCEANQWPQDVVEYFGDFAVGGDECHMAFHFPVMPRIFMAVRRESRFPISEILEQTPAIPENCQWGIFLR NHDELTLEMVTDEDRDYMWGEYAKDPRMKANIGIRRRLAPLLDNDTNQMELFNALLFSLPGSPVLYYGDEIGMGDNIWLG DRDGVRTPMQWTSDRNAGFSSANPGKLDLPLIQDPVFGYQSVNVEAQLENTSSLLHWMRRMIHARRNHPAFGLGTFHDLG GSNSTVLSYVREYTTEDGSEDIILCVNNLSRFPQPVELDLRRFEGRRPVELIGGVPFPEIGELPYLLTLAGYGFYWFRLT APETSEEGLLL >Mature_570_residues TQGLTPDPPENNPDWFKSAVFYEVLVRSFRDSNADGTGDFRGLVEQLDYLQWLGVDCLWIPPFFPSPLRDGGYDVADYTG VLPEIGTIEDFRYFLDEAHQRGLKVIIDFVMNHTSDQHPWFQASRSDPQGPYGDFYVWSDTDELYEEARIIFVDTEPSNW TWDPVRQQYFWHRFFSHQPDLNFDNPAVHDAMLDAIRFWLNMGLDGFRLDAVPYLYERPGTNGENLPETHEMLKKVRKVV DDEYPGRILLCEANQWPQDVVEYFGDFAVGGDECHMAFHFPVMPRIFMAVRRESRFPISEILEQTPAIPENCQWGIFLRN HDELTLEMVTDEDRDYMWGEYAKDPRMKANIGIRRRLAPLLDNDTNQMELFNALLFSLPGSPVLYYGDEIGMGDNIWLGD RDGVRTPMQWTSDRNAGFSSANPGKLDLPLIQDPVFGYQSVNVEAQLENTSSLLHWMRRMIHARRNHPAFGLGTFHDLGG SNSTVLSYVREYTTEDGSEDIILCVNNLSRFPQPVELDLRRFEGRRPVELIGGVPFPEIGELPYLLTLAGYGFYWFRLTA PETSEEGLLL
Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=555, Percent_Identity=30.6306306306306, Blast_Score=231, Evalue=1e-60, Organism=Escherichia coli, GI1790687, Length=563, Percent_Identity=28.7744227353464, Blast_Score=222, Evalue=4e-59, Organism=Escherichia coli, GI87081873, Length=508, Percent_Identity=25.1968503937008, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1786604, Length=407, Percent_Identity=24.5700245700246, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1789995, Length=249, Percent_Identity=27.710843373494, Blast_Score=69, Evalue=8e-13, Organism=Caenorhabditis elegans, GI32565753, Length=477, Percent_Identity=24.7379454926625, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI25147709, Length=474, Percent_Identity=23.6286919831224, Blast_Score=107, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6321731, Length=561, Percent_Identity=27.2727272727273, Blast_Score=186, Evalue=1e-47, Organism=Saccharomyces cerevisiae, GI6319776, Length=561, Percent_Identity=27.0944741532977, Blast_Score=184, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6321726, Length=567, Percent_Identity=28.3950617283951, Blast_Score=182, Evalue=1e-46, Organism=Saccharomyces cerevisiae, GI6322245, Length=529, Percent_Identity=27.9773156899811, Blast_Score=178, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6324416, Length=216, Percent_Identity=39.8148148148148, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6322241, Length=216, Percent_Identity=39.8148148148148, Blast_Score=167, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6322021, Length=216, Percent_Identity=39.8148148148148, Blast_Score=167, Evalue=5e-42, Organism=Drosophila melanogaster, GI45549022, Length=577, Percent_Identity=31.1958405545927, Blast_Score=247, Evalue=1e-65, Organism=Drosophila melanogaster, GI24583747, Length=589, Percent_Identity=30.7300509337861, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24583749, Length=586, Percent_Identity=30.8873720136519, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24586597, Length=575, Percent_Identity=32.5217391304348, Blast_Score=239, Evalue=3e-63, Organism=Drosophila melanogaster, GI24586587, Length=541, Percent_Identity=31.9778188539741, Blast_Score=238, Evalue=6e-63, Organism=Drosophila melanogaster, GI24586599, Length=578, Percent_Identity=30.9688581314879, Blast_Score=235, Evalue=8e-62, Organism=Drosophila melanogaster, GI24583745, Length=575, Percent_Identity=30.9565217391304, Blast_Score=231, Evalue=9e-61, Organism=Drosophila melanogaster, GI24586593, Length=580, Percent_Identity=29.6551724137931, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24586589, Length=521, Percent_Identity=31.4779270633397, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI221330053, Length=539, Percent_Identity=29.3135435992579, Blast_Score=219, Evalue=6e-57, Organism=Drosophila melanogaster, GI24586591, Length=506, Percent_Identity=29.4466403162055, Blast_Score=209, Evalue=6e-54, Organism=Drosophila melanogaster, GI281360393, Length=527, Percent_Identity=27.5142314990512, Blast_Score=168, Evalue=8e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR012810 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.16 [H]
Molecular weight: Translated: 65929; Mature: 65797
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGLTPDPPENNPDWFKSAVFYEVLVRSFRDSNADGTGDFRGLVEQLDYLQWLGVDCLW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE IPPFFPSPLRDGGYDVADYTGVLPEIGTIEDFRYFLDEAHQRGLKVIIDFVMNHTSDQHP ECCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WFQASRSDPQGPYGDFYVWSDTDELYEEARIIFVDTEPSNWTWDPVRQQYFWHRFFSHQP CEECCCCCCCCCCCCEEEECCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC DLNFDNPAVHDAMLDAIRFWLNMGLDGFRLDAVPYLYERPGTNGENLPETHEMLKKVRKV CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHH VDDEYPGRILLCEANQWPQDVVEYFGDFAVGGDECHMAFHFPVMPRIFMAVRRESRFPIS HCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCHH EILEQTPAIPENCQWGIFLRNHDELTLEMVTDEDRDYMWGEYAKDPRMKANIGIRRRLAP HHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCHHHHHHH LLDNDTNQMELFNALLFSLPGSPVLYYGDEIGMGDNIWLGDRDGVRTPMQWTSDRNAGFS HHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC SANPGKLDLPLIQDPVFGYQSVNVEAQLENTSSLLHWMRRMIHARRNHPAFGLGTFHDLG CCCCCCCCCCCCCCCCCCCEECCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC GSNSTVLSYVREYTTEDGSEDIILCVNNLSRFPQPVELDLRRFEGRRPVELIGGVPFPEI CCCHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCCHHHHHHHCCCCCCHHHCCCCCCCCC GELPYLLTLAGYGFYWFRLTAPETSEEGLLL CCCCEEEHHHCCCEEEEEEECCCCCCCCCCC >Mature Secondary Structure TQGLTPDPPENNPDWFKSAVFYEVLVRSFRDSNADGTGDFRGLVEQLDYLQWLGVDCLW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEE IPPFFPSPLRDGGYDVADYTGVLPEIGTIEDFRYFLDEAHQRGLKVIIDFVMNHTSDQHP ECCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC WFQASRSDPQGPYGDFYVWSDTDELYEEARIIFVDTEPSNWTWDPVRQQYFWHRFFSHQP CEECCCCCCCCCCCCEEEECCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC DLNFDNPAVHDAMLDAIRFWLNMGLDGFRLDAVPYLYERPGTNGENLPETHEMLKKVRKV CCCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHCCCCCCCCCCCHHHHHHHHHHHH VDDEYPGRILLCEANQWPQDVVEYFGDFAVGGDECHMAFHFPVMPRIFMAVRRESRFPIS HCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCHH EILEQTPAIPENCQWGIFLRNHDELTLEMVTDEDRDYMWGEYAKDPRMKANIGIRRRLAP HHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCHHHHHHH LLDNDTNQMELFNALLFSLPGSPVLYYGDEIGMGDNIWLGDRDGVRTPMQWTSDRNAGFS HHCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC SANPGKLDLPLIQDPVFGYQSVNVEAQLENTSSLLHWMRRMIHARRNHPAFGLGTFHDLG CCCCCCCCCCCCCCCCCCCEECCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCC GSNSTVLSYVREYTTEDGSEDIILCVNNLSRFPQPVELDLRRFEGRRPVELIGGVPFPEI CCCHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCCHHHHHHHCCCCCCHHHCCCCCCCCC GELPYLLTLAGYGFYWFRLTAPETSEEGLLL CCCCEEEHHHCCCEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8645698 [H]