| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119716041
Identifier: 119716041
GI number: 119716041
Start: 1920745
End: 1922211
Strand: Reverse
Name: 119716041
Synonym: Noca_1807
Alternate gene names: NA
Gene position: 1922211-1920745 (Counterclockwise)
Preceding gene: 119716042
Following gene: 119716040
Centisome position: 38.55
GC content: 71.98
Gene sequence:
>1467_bases GTGACCCCGGACGGACGAGTGACCCACATCGAGCCGGACGTGTTCGTGCGTTACCTCGAGCGCACCCGGTGGTTCGGCGG CAAGGGCCGCCCCTTCGAGGTCGCCTCCGTGCGCCGGATCGGCGAGGTGCCCCGCGACGAGGAGGACGGCGGCCCCCGTG TCGTCATCGAGCTGATCGAGGTCGCCTACAGCGACGGCCCGGGCGGCACCGAGGTCTACCAGGTCCCGATGTCGTTCTAC ACCGAGCCGGAGAGCCGGCTCGACCACGCGTTCATCGGCTGGTGGGACGAGCCCGGCTACGGCTGGGTGCACGCGTACGA CGCCCTCCACGACCGCGACGCGATGGACGGCTGGCTGCGTGCCTTCGACCGGGCGGCCCGCGAGCCGGGCGGCAACCTCA GCGACGACGACAGCGGGCTGCGGTTCCACCGCCTGCCCGGGCACGACCTCGACCTCGACGCGCACTCGACGCTGTTCTCC GGTGAGCAGTCGAACTCCTCGGTGGCGTTCGGCGAGGACTGCCTGATGAAGGTGTTCCGCAAGATCACCCCCGGGGTGAA CCCGGACATCAGCGTCCACGAGGTGCTCACCAACGCCGGTTCCGACCACATCGCGGCGCTGTACGGCTGGCTGGACTGGG TCGACTGGGAGGCCGACCCCGAGGCCGAGGAGCGCGCCGGCACGACGATGCAGCTGGCCATGCTCCAGCAGTTCCTGCGG ACCGCGAGCGACGGCTGGGACCTGGCGCTGACGAGCGCCCGCGACCTGTTCGCCGAGGCCGACCTGCATGCCCACGAGGC CGGCGGAGACTTCGCCGCCGAGGCGGCCCGGCTGGGGACCGCGCTGCGCGAGGTCCACGAGGACCTCGCCGAGCACTTCC CGGTCGAGCGCCGCGGCCCCGAGGCGCTCACCGAGCTGGCCGACGCGATGTCGGCGCGGCTCGACGCCGCGCTCGAGGTG GTGCCCGAGCTCGCCGCGCACACCGAGACGCTACGGGCGACGTACGACCGCGTCCGTGGACTCGGCGGACTGGAGGTCCA GCAGATCCACGGGGACCTGCACCTGGGCCAGACGCTGCGCACCAGCCTGGGCTGGAAGATCGTCGACTTCGAGGGCGAGC CGGCCAAGCCGCTCGCCGAGCGGCTGCGACCGGACTCGGTGTGGCGCGACGTCGCGGGCATGCTGCGCTCCTTCGACTAT GTGCCCCGGGTGGTCGAGCGCCAGTTCGCCGAGGACCAGCCCGAGGGCGCCAGCCAGCGCGCCTACCGCGCGGAGGAGTG GGCGCACCGCAACCGCAACCACTTCCTGACCGCGTACGCCGGCGGCGAGCTCACCGAGGAGCAGCAGGCGCTGCTCGACG CCTATGTCGTGGACAAGGCGGTGTACGAGACCGTGTACGAGACACGAAACCGTCCGACCTGGGTGGCCATCCCGCTCGAG GCCGTGGCGAGGATCGGAGCGGCATGA
Upstream 100 bases:
>100_bases CGGAGATCGGCGAGCTGCCCTACCTCCTCACCCTGGCGGGGTACGGCTTCTACTGGTTCCGCCTGACCGCTCCCGAGACC AGCGAGGAGGGGCTGCTGCT
Downstream 100 bases:
>100_bases GCGACAAGTCCACCCCCCGGACCACCTCCGAGCCGGCCCCGGCGAGCGGCCCCGCGCTGCATCCGGTGTCGACCGCCGAG CTGCACCAGGTCGCGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: Aminoglycoside Phosphotransferase; Pep2 Protein; 1 4-Alpha-Glucan Branching; Trehalose Synthase-Like; Alpha Amylase Domain-Containing Protein; Trehalose Synthase/ Maltokinase; Glycosidase; Protein Probably Involved In Trehalose Biosynthesis; Alpha Amylase; Glycogen Branching; Sugar Phosphotransferase; Trehalose Synthase/Maltokinase; Trehalose Synthase-Fused Maltokinase-Like Protein; Alpha Amylase Catalytic Region; Alpha-Glucosidase; Trehalose Synthase Protein; Trehalose Synthase-Like Protein; Trehalose Synthase-Fused Maltokinase; Alpha Amylase/Trehalose Synthase; Alpha Amylase Family Protein; Bifunctional Trehalose/Maltose Transglucosylase/Maltokinase; 4-Alpha-Glucanotransferase; Domain Involved In Trehalose Biosynthesis; Glycoside Hydrolase Family Protein; Trehalose Synthase-Fused Maltokinase; Trehalose Synthas; Alpha-Amylase Family Protein; Maltokinase; Trehalose Synthase Maltokinase Fusion Protein; Trehalose Synthase Maltose Alpha-D-Glucosyltransferase; Trehalose Synthase/Glycosidase Fusion Protein; Alpha-1 4-GlucanAlpha-1 4-Glucan 6-Glycosyltransferase; Alpha Amylase Catalytic Domain Subfamily; Phosphotransferase Family Protein; Phosphotransferase; Alpha Amylase Catalytic Subdomain
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MTPDGRVTHIEPDVFVRYLERTRWFGGKGRPFEVASVRRIGEVPRDEEDGGPRVVIELIEVAYSDGPGGTEVYQVPMSFY TEPESRLDHAFIGWWDEPGYGWVHAYDALHDRDAMDGWLRAFDRAAREPGGNLSDDDSGLRFHRLPGHDLDLDAHSTLFS GEQSNSSVAFGEDCLMKVFRKITPGVNPDISVHEVLTNAGSDHIAALYGWLDWVDWEADPEAEERAGTTMQLAMLQQFLR TASDGWDLALTSARDLFAEADLHAHEAGGDFAAEAARLGTALREVHEDLAEHFPVERRGPEALTELADAMSARLDAALEV VPELAAHTETLRATYDRVRGLGGLEVQQIHGDLHLGQTLRTSLGWKIVDFEGEPAKPLAERLRPDSVWRDVAGMLRSFDY VPRVVERQFAEDQPEGASQRAYRAEEWAHRNRNHFLTAYAGGELTEEQQALLDAYVVDKAVYETVYETRNRPTWVAIPLE AVARIGAA
Sequences:
>Translated_488_residues MTPDGRVTHIEPDVFVRYLERTRWFGGKGRPFEVASVRRIGEVPRDEEDGGPRVVIELIEVAYSDGPGGTEVYQVPMSFY TEPESRLDHAFIGWWDEPGYGWVHAYDALHDRDAMDGWLRAFDRAAREPGGNLSDDDSGLRFHRLPGHDLDLDAHSTLFS GEQSNSSVAFGEDCLMKVFRKITPGVNPDISVHEVLTNAGSDHIAALYGWLDWVDWEADPEAEERAGTTMQLAMLQQFLR TASDGWDLALTSARDLFAEADLHAHEAGGDFAAEAARLGTALREVHEDLAEHFPVERRGPEALTELADAMSARLDAALEV VPELAAHTETLRATYDRVRGLGGLEVQQIHGDLHLGQTLRTSLGWKIVDFEGEPAKPLAERLRPDSVWRDVAGMLRSFDY VPRVVERQFAEDQPEGASQRAYRAEEWAHRNRNHFLTAYAGGELTEEQQALLDAYVVDKAVYETVYETRNRPTWVAIPLE AVARIGAA >Mature_487_residues TPDGRVTHIEPDVFVRYLERTRWFGGKGRPFEVASVRRIGEVPRDEEDGGPRVVIELIEVAYSDGPGGTEVYQVPMSFYT EPESRLDHAFIGWWDEPGYGWVHAYDALHDRDAMDGWLRAFDRAAREPGGNLSDDDSGLRFHRLPGHDLDLDAHSTLFSG EQSNSSVAFGEDCLMKVFRKITPGVNPDISVHEVLTNAGSDHIAALYGWLDWVDWEADPEAEERAGTTMQLAMLQQFLRT ASDGWDLALTSARDLFAEADLHAHEAGGDFAAEAARLGTALREVHEDLAEHFPVERRGPEALTELADAMSARLDAALEVV PELAAHTETLRATYDRVRGLGGLEVQQIHGDLHLGQTLRTSLGWKIVDFEGEPAKPLAERLRPDSVWRDVAGMLRSFDYV PRVVERQFAEDQPEGASQRAYRAEEWAHRNRNHFLTAYAGGELTEEQQALLDAYVVDKAVYETVYETRNRPTWVAIPLEA VARIGAA
Specific function: Unknown
COG id: COG3281
COG function: function code G; Uncharacterized protein, probably involved in trehalose biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54554; Mature: 54423
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDGRVTHIEPDVFVRYLERTRWFGGKGRPFEVASVRRIGEVPRDEEDGGPRVVIELIE CCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH VAYSDGPGGTEVYQVPMSFYTEPESRLDHAFIGWWDEPGYGWVHAYDALHDRDAMDGWLR HHHCCCCCCCCEEEECHHHHCCCHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHH AFDRAAREPGGNLSDDDSGLRFHRLPGHDLDLDAHSTLFSGEQSNSSVAFGEDCLMKVFR HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHH KITPGVNPDISVHEVLTNAGSDHIAALYGWLDWVDWEADPEAEERAGTTMQLAMLQQFLR HHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHH TASDGWDLALTSARDLFAEADLHAHEAGGDFAAEAARLGTALREVHEDLAEHFPVERRGP HCCCCCCEEEHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH EALTELADAMSARLDAALEVVPELAAHTETLRATYDRVRGLGGLEVQQIHGDLHLGQTLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH TSLGWKIVDFEGEPAKPLAERLRPDSVWRDVAGMLRSFDYVPRVVERQFAEDQPEGASQR HHCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AYRAEEWAHRNRNHFLTAYAGGELTEEQQALLDAYVVDKAVYETVYETRNRPTWVAIPLE HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHH AVARIGAA HHHHHCCC >Mature Secondary Structure TPDGRVTHIEPDVFVRYLERTRWFGGKGRPFEVASVRRIGEVPRDEEDGGPRVVIELIE CCCCCEEEECHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH VAYSDGPGGTEVYQVPMSFYTEPESRLDHAFIGWWDEPGYGWVHAYDALHDRDAMDGWLR HHHCCCCCCCCEEEECHHHHCCCHHHCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHH AFDRAAREPGGNLSDDDSGLRFHRLPGHDLDLDAHSTLFSGEQSNSSVAFGEDCLMKVFR HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHH KITPGVNPDISVHEVLTNAGSDHIAALYGWLDWVDWEADPEAEERAGTTMQLAMLQQFLR HHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHH TASDGWDLALTSARDLFAEADLHAHEAGGDFAAEAARLGTALREVHEDLAEHFPVERRGP HCCCCCCEEEHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH EALTELADAMSARLDAALEVVPELAAHTETLRATYDRVRGLGGLEVQQIHGDLHLGQTLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHH TSLGWKIVDFEGEPAKPLAERLRPDSVWRDVAGMLRSFDYVPRVVERQFAEDQPEGASQR HHCCEEEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH AYRAEEWAHRNRNHFLTAYAGGELTEEQQALLDAYVVDKAVYETVYETRNRPTWVAIPLE HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECHH AVARIGAA HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA