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The map label for this gene is argF [H]

Identifier: 119715867

GI number: 119715867

Start: 1732410

End: 1733393

Strand: Direct

Name: argF [H]

Synonym: Noca_1632

Alternate gene names: 119715867

Gene position: 1732410-1733393 (Clockwise)

Preceding gene: 119715866

Following gene: 119715868

Centisome position: 34.75

GC content: 69.11

Gene sequence:

>984_bases
ATGCAGACGCACCTGCGCGGCCGGGACGTCATCGACTTCCAGGAGTGGACCCGCGACGAGATCGAGACCGTGCTCGACGT
CGCGTTCGCGCTGAAACGGGACCGGGCACTCGGGCAGCCACACCCGTACCTGCGGGACAAGGTGCTCGCGATGCTGTTCT
TCTTCGCGAGCACCCGGACCCGGGCCTCCTTCGAGGCCGGGATGGCGCAGCTGGGCGGGCACGCCCAGTTCATCGAGAGC
CGCTCGACCCAGATCGCGCACGGCGACACGGCCACCGAGATCGGCGAGATCCTCGGCCGCTACAACGACGGCATCGCGAT
CCGCAACGTCGACTGGGGTGTCGGCAACGGCTACATCCGCGCCGTCGCCGTCGCCGCCGCGAGCCGGGTGCCCGTGCTCA
ACATGCAGTGCGACCACTTCCACCCGCACCAGGCGCTGGCCGACCTGATGACGATCATCGAGCGGTTCGGCGACCCCCGC
GGACGCACCGCGACGATCAGCTGGGCGTGCGCGAAGACGTACTCCAAGCCGCTGAGCGTGCCGCAGAGCCTGATCATGTT
GCTCCCGCGGTTCGGCATGAACGTCCGCCTGGTGCACCCGCCCGAGTTCGCGCTGATGCCGGAGTACGTCGAGCAGGCGC
GTGAGAACGCCCGGCTCGGTCGGGCTTCGTTCGAGCTGATGGACGACTTCGACGCGGGCATCCGCGGGACCGACGTCGTG
TATGCCAAGAGCTGGGGCGCGGTGATGACCACCTCCGACGTGGAGGAGGAGAAGCGGCTCGTCGACTCCTACGCCGACTG
GATCGCCGACGAGCGACGGCTCGACACCGCGTCCGACGACGCGATCTACATGCACCCGCTGCCGGGCGAGCGCGGCACCG
AGGTGACCGACGGCGTGATCGACGGTCCGCACAGTGCGGTCTTCGACCAGGCCGAGAACCGCCTGCACGGCCAGAAGGCC
GTGCTGGCGCTGACGATGGGCTGA

Upstream 100 bases:

>100_bases
ACGCCCGCTACTGGGCCGAGGCCGCCAACGGCGTCTCGGTCCGGATGGCGCTGCTGGCGCTGGTCCTCGGCGCGGTCGAG
TAGCCGGGGGAGGGGGACCG

Downstream 100 bases:

>100_bases
GGCCCGGCAGGACGGTGACACCATGGTGACGGCAATCGCCTACGGGCGCCCCTCGACGATCGACGAGGCCTTCGAGCTGC
TGGCCCGCCCCAGTGCGGTC

Product: ornithine carbamoyltransferase

Products: NA

Alternate protein names: OTCase [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MQTHLRGRDVIDFQEWTRDEIETVLDVAFALKRDRALGQPHPYLRDKVLAMLFFFASTRTRASFEAGMAQLGGHAQFIES
RSTQIAHGDTATEIGEILGRYNDGIAIRNVDWGVGNGYIRAVAVAAASRVPVLNMQCDHFHPHQALADLMTIIERFGDPR
GRTATISWACAKTYSKPLSVPQSLIMLLPRFGMNVRLVHPPEFALMPEYVEQARENARLGRASFELMDDFDAGIRGTDVV
YAKSWGAVMTTSDVEEEKRLVDSYADWIADERRLDTASDDAIYMHPLPGERGTEVTDGVIDGPHSAVFDQAENRLHGQKA
VLALTMG

Sequences:

>Translated_327_residues
MQTHLRGRDVIDFQEWTRDEIETVLDVAFALKRDRALGQPHPYLRDKVLAMLFFFASTRTRASFEAGMAQLGGHAQFIES
RSTQIAHGDTATEIGEILGRYNDGIAIRNVDWGVGNGYIRAVAVAAASRVPVLNMQCDHFHPHQALADLMTIIERFGDPR
GRTATISWACAKTYSKPLSVPQSLIMLLPRFGMNVRLVHPPEFALMPEYVEQARENARLGRASFELMDDFDAGIRGTDVV
YAKSWGAVMTTSDVEEEKRLVDSYADWIADERRLDTASDDAIYMHPLPGERGTEVTDGVIDGPHSAVFDQAENRLHGQKA
VLALTMG
>Mature_327_residues
MQTHLRGRDVIDFQEWTRDEIETVLDVAFALKRDRALGQPHPYLRDKVLAMLFFFASTRTRASFEAGMAQLGGHAQFIES
RSTQIAHGDTATEIGEILGRYNDGIAIRNVDWGVGNGYIRAVAVAAASRVPVLNMQCDHFHPHQALADLMTIIERFGDPR
GRTATISWACAKTYSKPLSVPQSLIMLLPRFGMNVRLVHPPEFALMPEYVEQARENARLGRASFELMDDFDAGIRGTDVV
YAKSWGAVMTTSDVEEEKRLVDSYADWIADERRLDTASDDAIYMHPLPGERGTEVTDGVIDGPHSAVFDQAENRLHGQKA
VLALTMG

Specific function: Unknown

COG id: COG0078

COG function: function code E; Ornithine carbamoyltransferase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATCase/OTCase family [H]

Homologues:

Organism=Homo sapiens, GI38788445, Length=314, Percent_Identity=27.0700636942675, Blast_Score=121, Evalue=7e-28,
Organism=Homo sapiens, GI18105007, Length=330, Percent_Identity=28.4848484848485, Blast_Score=105, Evalue=7e-23,
Organism=Escherichia coli, GI48994908, Length=347, Percent_Identity=33.1412103746398, Blast_Score=177, Evalue=7e-46,
Organism=Escherichia coli, GI1790703, Length=343, Percent_Identity=28.5714285714286, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI1786469, Length=346, Percent_Identity=28.0346820809249, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI2367364, Length=335, Percent_Identity=28.0597014925373, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193204318, Length=341, Percent_Identity=26.9794721407625, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6322331, Length=325, Percent_Identity=30.7692307692308, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6322373, Length=321, Percent_Identity=24.2990654205607, Blast_Score=100, Evalue=5e-22,
Organism=Drosophila melanogaster, GI24642586, Length=341, Percent_Identity=25.8064516129032, Blast_Score=92, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006132
- InterPro:   IPR006130
- InterPro:   IPR006131
- InterPro:   IPR002292 [H]

Pfam domain/function: PF00185 OTCace; PF02729 OTCace_N [H]

EC number: =2.1.3.3 [H]

Molecular weight: Translated: 36419; Mature: 36419

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTHLRGRDVIDFQEWTRDEIETVLDVAFALKRDRALGQPHPYLRDKVLAMLFFFASTRT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
RASFEAGMAQLGGHAQFIESRSTQIAHGDTATEIGEILGRYNDGIAIRNVDWGVGNGYIR
HHHHHHHHHHHCCHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH
AVAVAAASRVPVLNMQCDHFHPHQALADLMTIIERFGDPRGRTATISWACAKTYSKPLSV
HHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCH
PQSLIMLLPRFGMNVRLVHPPEFALMPEYVEQARENARLGRASFELMDDFDAGIRGTDVV
HHHHHHHHHHCCCEEEEECCCCCHHCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEE
YAKSWGAVMTTSDVEEEKRLVDSYADWIADERRLDTASDDAIYMHPLPGERGTEVTDGVI
EEECCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCC
DGPHSAVFDQAENRLHGQKAVLALTMG
CCCHHHHHHHHHHHHCCCEEEEEEECC
>Mature Secondary Structure
MQTHLRGRDVIDFQEWTRDEIETVLDVAFALKRDRALGQPHPYLRDKVLAMLFFFASTRT
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
RASFEAGMAQLGGHAQFIESRSTQIAHGDTATEIGEILGRYNDGIAIRNVDWGVGNGYIR
HHHHHHHHHHHCCHHHHHHCCCCEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCHHH
AVAVAAASRVPVLNMQCDHFHPHQALADLMTIIERFGDPRGRTATISWACAKTYSKPLSV
HHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHCCCCH
PQSLIMLLPRFGMNVRLVHPPEFALMPEYVEQARENARLGRASFELMDDFDAGIRGTDVV
HHHHHHHHHHCCCEEEEECCCCCHHCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEE
YAKSWGAVMTTSDVEEEKRLVDSYADWIADERRLDTASDDAIYMHPLPGERGTEVTDGVI
EEECCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCC
DGPHSAVFDQAENRLHGQKAVLALTMG
CCCHHHHHHHHHHHHCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA