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The map label for this gene is ygfM [H]

Identifier: 119715868

GI number: 119715868

Start: 1733416

End: 1734141

Strand: Direct

Name: ygfM [H]

Synonym: Noca_1633

Alternate gene names: 119715868

Gene position: 1733416-1734141 (Clockwise)

Preceding gene: 119715867

Following gene: 119715869

Centisome position: 34.77

GC content: 74.79

Gene sequence:

>726_bases
ATGGTGACGGCAATCGCCTACGGGCGCCCCTCGACGATCGACGAGGCCTTCGAGCTGCTGGCCCGCCCCAGTGCGGTCGT
GCTCGCCGGCGGCACCCGCCTCAACGGTGACACCTCGCCGCGGCAGGTCGAGGTGGTGGACCTGCAGGCCCTCCCCCTCC
ACGGCATCCGCTCCGAGGGAGACCACGGGCTGCGGATCGGGGCCATGACGACGCTGCAGCAGGTCGCCGACGACGACCTG
GTCCCTCCGACCGTGCGCGAGGCGGCCCGCCGCGAGCGACCGAGCACCCTGCGCGCCCAGGGCACCCTCGGCGGCTGCCT
GGCGACCGGAGACGCCGAGAGCGAGCTGCTCGCCGCGCTCCTGGTGCACGAGGCGGTCGTGCACGTCGAGAGCCGGGACC
GGTCCGGCGCCCTCTCCCTGGAGGCGTTCTTGGACGGGCTGCCGCTGGAGCCCGGACACCTGGTGACCGCGGTGGCGCTG
CGCACCGACGGCAGCACCGCAGCAGCCCGCACCGCGCGGACGCCCGCCGACCGGGCCATCGTCGCCGCCTTCGCCCGGAC
CGTGCAGGACGGTCGCCGGATCGCGCTCACCGGCGTCGCGCCGAGACCGGTGCTCGTGCAACCCGGGGAGGAGCTCGACC
CGACGGGTGATTTCCGGGGATCGAGCGAGTACCGCCGGGCCCTGGCAGGCGTCCTGATCACCCGGGTGCTGGAGGCGACG
TCATGA

Upstream 100 bases:

>100_bases
CCGCACAGTGCGGTCTTCGACCAGGCCGAGAACCGCCTGCACGGCCAGAAGGCCGTGCTGGCGCTGACGATGGGCTGAGG
CCCGGCAGGACGGTGACACC

Downstream 100 bases:

>100_bases
GCACCATGATCGACCTCGAGCTCCACCTCAACGGCGCTCCGCGCACCGTGACCTGCGCGCCGGGCGACTCGCTGCTGAGC
GTGCTGCGGCGGCTGGGCTG

Product: molybdopterin dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MVTAIAYGRPSTIDEAFELLARPSAVVLAGGTRLNGDTSPRQVEVVDLQALPLHGIRSEGDHGLRIGAMTTLQQVADDDL
VPPTVREAARRERPSTLRAQGTLGGCLATGDAESELLAALLVHEAVVHVESRDRSGALSLEAFLDGLPLEPGHLVTAVAL
RTDGSTAAARTARTPADRAIVAAFARTVQDGRRIALTGVAPRPVLVQPGEELDPTGDFRGSSEYRRALAGVLITRVLEAT
S

Sequences:

>Translated_241_residues
MVTAIAYGRPSTIDEAFELLARPSAVVLAGGTRLNGDTSPRQVEVVDLQALPLHGIRSEGDHGLRIGAMTTLQQVADDDL
VPPTVREAARRERPSTLRAQGTLGGCLATGDAESELLAALLVHEAVVHVESRDRSGALSLEAFLDGLPLEPGHLVTAVAL
RTDGSTAAARTARTPADRAIVAAFARTVQDGRRIALTGVAPRPVLVQPGEELDPTGDFRGSSEYRRALAGVLITRVLEAT
S
>Mature_241_residues
MVTAIAYGRPSTIDEAFELLARPSAVVLAGGTRLNGDTSPRQVEVVDLQALPLHGIRSEGDHGLRIGAMTTLQQVADDDL
VPPTVREAARRERPSTLRAQGTLGGCLATGDAESELLAALLVHEAVVHVESRDRSGALSLEAFLDGLPLEPGHLVTAVAL
RTDGSTAAARTARTPADRAIVAAFARTVQDGRRIALTGVAPRPVLVQPGEELDPTGDFRGSSEYRRALAGVLITRVLEAT
S

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1789245, Length=248, Percent_Identity=33.0645161290323, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346
- InterPro:   IPR017698 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: NA

Molecular weight: Translated: 25317; Mature: 25317

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTAIAYGRPSTIDEAFELLARPSAVVLAGGTRLNGDTSPRQVEVVDLQALPLHGIRSEG
CEEEEECCCCCCHHHHHHHHHCCCEEEEECCEEECCCCCCCEEEEEEEEECCCCCCCCCC
DHGLRIGAMTTLQQVADDDLVPPTVREAARRERPSTLRAQGTLGGCLATGDAESELLAAL
CCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCCCCEEECCCCHHHHHHHH
LVHEAVVHVESRDRSGALSLEAFLDGLPLEPGHLVTAVALRTDGSTAAARTARTPADRAI
HHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHCCCCHHHHH
VAAFARTVQDGRRIALTGVAPRPVLVQPGEELDPTGDFRGSSEYRRALAGVLITRVLEAT
HHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
S
C
>Mature Secondary Structure
MVTAIAYGRPSTIDEAFELLARPSAVVLAGGTRLNGDTSPRQVEVVDLQALPLHGIRSEG
CEEEEECCCCCCHHHHHHHHHCCCEEEEECCEEECCCCCCCEEEEEEEEECCCCCCCCCC
DHGLRIGAMTTLQQVADDDLVPPTVREAARRERPSTLRAQGTLGGCLATGDAESELLAAL
CCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEECCCCCCEEECCCCHHHHHHHH
LVHEAVVHVESRDRSGALSLEAFLDGLPLEPGHLVTAVALRTDGSTAAARTARTPADRAI
HHHHHHHHHCCCCCCCCEEHHHHHCCCCCCCCCEEEEEEEECCCCHHHHHHCCCCHHHHH
VAAFARTVQDGRRIALTGVAPRPVLVQPGEELDPTGDFRGSSEYRRALAGVLITRVLEAT
HHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]