| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is 119715836
Identifier: 119715836
GI number: 119715836
Start: 1699156
End: 1699668
Strand: Direct
Name: 119715836
Synonym: Noca_1600
Alternate gene names: NA
Gene position: 1699156-1699668 (Clockwise)
Preceding gene: 119715835
Following gene: 119715846
Centisome position: 34.08
GC content: 71.35
Gene sequence:
>513_bases TTGCTGGGTCACGCCGCACCGTCCGGCAAACGGAAGTGCCGCGTCCGCCGATCGGCGGACGCGGCACGTGCGCCCGTGTG CGGCGGGAGGGGCTCAGCTGGCGCCGGCGCTGGCTCCGTGGCCGACCACGGTGACCGGGACGCCGAGGTGGCCCAGCCGG TGTTGCAGGTCCTGGTGCAGACGCACCGTGAGCGCGTGTTCATGGACCGCGAGCATGATCTCGTCGATCGGCTCCGCGTT CAGCACGTGCTCCAGGGTGTCCATCGGGTCGTGCTGGACCGAGACCGAGCCGACCACGTGGCCTCCGGCGGCCCGTTCGA GCTCTGGCAGTGCCGCCCGCAGCACCTGTTCTGCCGCGGCTGCCTTGTCGTGGCGTTCGGGGTGGAGGAGGTGGACCTCG GCGCGGGCCGGGTTCGGGATGACGACACGGAACTGTGCCGGGGACTGCGCCGTCCGTTGCTTGATCGCCTCGAGCAGCTC GGGGTTGGGGTCGGCCGTGTCGGTGACGATTAG
Upstream 100 bases:
>100_bases TCGAGAGGGTCGTCACCGGCCTGCAGGGGTCGGTCGCCGTGGATGAGGCCCCCGGTGGAGGAGCCAGGTTCACCGTGACG CTGCCCGCAGCCGGCTGACC
Downstream 100 bases:
>100_bases GACGCGATGGGGGTGGGTGTCGTTCACGGGTTTCTCCTTGTCCAGGTTGTGGGTCAGGCCTCGATGAGCCGCGGTTCTTC CTCGGTGCGGTCCACCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MLGHAAPSGKRKCRVRRSADAARAPVCGGRGSAGAGAGSVADHGDRDAEVAQPVLQVLVQTHRERVFMDREHDLVDRLRV QHVLQGVHRVVLDRDRADHVASGGPFELWQCRPQHLFCRGCLVVAFGVEEVDLGAGRVRDDDTELCRGLRRPLLDRLEQL GVGVGRVGDD
Sequences:
>Translated_170_residues MLGHAAPSGKRKCRVRRSADAARAPVCGGRGSAGAGAGSVADHGDRDAEVAQPVLQVLVQTHRERVFMDREHDLVDRLRV QHVLQGVHRVVLDRDRADHVASGGPFELWQCRPQHLFCRGCLVVAFGVEEVDLGAGRVRDDDTELCRGLRRPLLDRLEQL GVGVGRVGDD >Mature_170_residues MLGHAAPSGKRKCRVRRSADAARAPVCGGRGSAGAGAGSVADHGDRDAEVAQPVLQVLVQTHRERVFMDREHDLVDRLRV QHVLQGVHRVVLDRDRADHVASGGPFELWQCRPQHLFCRGCLVVAFGVEEVDLGAGRVRDDDTELCRGLRRPLLDRLEQL GVGVGRVGDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18550; Mature: 18550
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGHAAPSGKRKCRVRRSADAARAPVCGGRGSAGAGAGSVADHGDRDAEVAQPVLQVLVQ CCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH THRERVFMDREHDLVDRLRVQHVLQGVHRVVLDRDRADHVASGGPFELWQCRPQHLFCRG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCHHHHHHHH CLVVAFGVEEVDLGAGRVRDDDTELCRGLRRPLLDRLEQLGVGVGRVGDD HHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MLGHAAPSGKRKCRVRRSADAARAPVCGGRGSAGAGAGSVADHGDRDAEVAQPVLQVLVQ CCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH THRERVFMDREHDLVDRLRVQHVLQGVHRVVLDRDRADHVASGGPFELWQCRPQHLFCRG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCHHHHHHHH CLVVAFGVEEVDLGAGRVRDDDTELCRGLRRPLLDRLEQLGVGVGRVGDD HHHHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA