| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is rstB [H]
Identifier: 119715835
GI number: 119715835
Start: 1697792
End: 1699153
Strand: Direct
Name: rstB [H]
Synonym: Noca_1599
Alternate gene names: 119715835
Gene position: 1697792-1699153 (Clockwise)
Preceding gene: 119715834
Following gene: 119715836
Centisome position: 34.05
GC content: 70.41
Gene sequence:
>1362_bases GTGAGCCGCGTCGAGCCGGGGACGCCCCAGGGGGGCTGGGGGCGACGCGTGCTGGCCCCGGTGCGGGTGCGCGTCACTCT TGCCGCGACCAGCGTGGCCCTGGTGGTCGGAGTCGTCGGTGCGGTGCTCTTCGTGGCATCCCTGCACCGCGACCTGGAGC GTGCGCTGGTCGCCTCGGCCCGCCAGCAGGTGGAGACGATCACCGCGCAGCTCGAGAACGGTTCCACCCCGGCGCAGGCG GCCGTCACGGCGCGCGACGACGTGATCACCCAGATCCTGTCACCGAGGGGCGAGATCATCGGCAGCGACCATCCGAAGAT CTCGACGCGGCTGCGGGACTCAGCGGGGGTGTCCACCTCGGTCCAGGTGACAGGGCTCGACGACACCTATGTCGTCGTCG CCGCTGTGGCACCTTCGGGTGAGCTGGTCACCGTTGCACACTCCCAGGAGCAACTCGCTCAGGCGAGGAGGACGGCGGAG ACACTGTTGACCGTCGCACTGCCGCTCGGGCTCGCCCTCTTGGCGGCTGCGGTGTGGCTGGCGGTGGGACAGGCTTTGAG GCCCGTGGAGTCGATGCGTCGGGAGGCCGCGCAGATCACCACCGCACACCAGGACCGACGACTGCCGGTGCCGCAAGGCG GCGATGAGATCTCCCGGTTGGCGTTGACACTGAACCAGATGCTCGAGCGCATCGGTTCCTCCCAACGTGCCCAGCGCCAG TTCGCCTCCGACGCCTCCCACGAGCTGCGCTCACCGCTGGCCGTGATCCGCCAGCTCGCCGAGGTCGCGCGCCGGCACCC CGACCAAGCTGACGTCGTCACCTTGACGAACGAGATCCTGGCTGAGGAAGGGCGCATGGAGGAACTGGTGGCCGCGCTCC TGACGCTGGCGAGGCTCGAGGACCGGGATCCAGCCACGAGCCACCTGGTCGATCTCGATGACGTGGTGCTCGCTGAGGTG AAGCGTGCCCGTCCGGCCAGCGGTCCGGAGATCGATGCGACCGGCGTAGGGGCAGGGCAGGTCCGTGGCGAGGAGGTCCT CTTCGGGCAGGTGGTCCGCAACCTGCTCAGCAACGCCCTACGCCACGCACGCTCCCGCGTCCAGGTGTCCCTCGACGAGG TGGACAGCCGGGTGCGCCTGGTGGTCGCCGACGACGGCCCAGGCATCCCTGTCTCCGAACGCGAGCGCGTCTTCGGGCGG TTCGTCCGCCTCGACGATGCACGCGCGCGCGACGAAGGTGGCGCAGGTCTGGGGCTCGCGATCGTCGAGAGGGTCGTCAC CGGCCTGCAGGGGTCGGTCGCCGTGGATGAGGCCCCCGGTGGAGGAGCCAGGTTCACCGTGACGCTGCCCGCAGCCGGCT GA
Upstream 100 bases:
>100_bases ACGTCGGACGCCTGCGACGCAAGGTGGACAAGCCGTTCGGGTGCGCCGACCTCGAGACCTTCCGCGGGACCGGGTATCGC CTCCGGGTTCCGGAGGTCCC
Downstream 100 bases:
>100_bases CCTTGCTGGGTCACGCCGCACCGTCCGGCAAACGGAAGTGCCGCGTCCGCCGATCGGCGGACGCGGCACGTGCGCCCGTG TGCGGCGGGAGGGGCTCAGC
Product: ATPase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MSRVEPGTPQGGWGRRVLAPVRVRVTLAATSVALVVGVVGAVLFVASLHRDLERALVASARQQVETITAQLENGSTPAQA AVTARDDVITQILSPRGEIIGSDHPKISTRLRDSAGVSTSVQVTGLDDTYVVVAAVAPSGELVTVAHSQEQLAQARRTAE TLLTVALPLGLALLAAAVWLAVGQALRPVESMRREAAQITTAHQDRRLPVPQGGDEISRLALTLNQMLERIGSSQRAQRQ FASDASHELRSPLAVIRQLAEVARRHPDQADVVTLTNEILAEEGRMEELVAALLTLARLEDRDPATSHLVDLDDVVLAEV KRARPASGPEIDATGVGAGQVRGEEVLFGQVVRNLLSNALRHARSRVQVSLDEVDSRVRLVVADDGPGIPVSERERVFGR FVRLDDARARDEGGAGLGLAIVERVVTGLQGSVAVDEAPGGGARFTVTLPAAG
Sequences:
>Translated_453_residues MSRVEPGTPQGGWGRRVLAPVRVRVTLAATSVALVVGVVGAVLFVASLHRDLERALVASARQQVETITAQLENGSTPAQA AVTARDDVITQILSPRGEIIGSDHPKISTRLRDSAGVSTSVQVTGLDDTYVVVAAVAPSGELVTVAHSQEQLAQARRTAE TLLTVALPLGLALLAAAVWLAVGQALRPVESMRREAAQITTAHQDRRLPVPQGGDEISRLALTLNQMLERIGSSQRAQRQ FASDASHELRSPLAVIRQLAEVARRHPDQADVVTLTNEILAEEGRMEELVAALLTLARLEDRDPATSHLVDLDDVVLAEV KRARPASGPEIDATGVGAGQVRGEEVLFGQVVRNLLSNALRHARSRVQVSLDEVDSRVRLVVADDGPGIPVSERERVFGR FVRLDDARARDEGGAGLGLAIVERVVTGLQGSVAVDEAPGGGARFTVTLPAAG >Mature_452_residues SRVEPGTPQGGWGRRVLAPVRVRVTLAATSVALVVGVVGAVLFVASLHRDLERALVASARQQVETITAQLENGSTPAQAA VTARDDVITQILSPRGEIIGSDHPKISTRLRDSAGVSTSVQVTGLDDTYVVVAAVAPSGELVTVAHSQEQLAQARRTAET LLTVALPLGLALLAAAVWLAVGQALRPVESMRREAAQITTAHQDRRLPVPQGGDEISRLALTLNQMLERIGSSQRAQRQF ASDASHELRSPLAVIRQLAEVARRHPDQADVVTLTNEILAEEGRMEELVAALLTLARLEDRDPATSHLVDLDDVVLAEVK RARPASGPEIDATGVGAGQVRGEEVLFGQVVRNLLSNALRHARSRVQVSLDEVDSRVRLVVADDGPGIPVSERERVFGRF VRLDDARARDEGGAGLGLAIVERVVTGLQGSVAVDEAPGGGARFTVTLPAAG
Specific function: Member of the two-component regulatory system rstB/rstA. RstB functions as a membrane-associated protein kinase that phosphorylates rstA (Potential) [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1787894, Length=340, Percent_Identity=32.6470588235294, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI1786783, Length=290, Percent_Identity=32.7586206896552, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1788393, Length=251, Percent_Identity=34.2629482071713, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1790346, Length=270, Percent_Identity=26.2962962962963, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1790861, Length=296, Percent_Identity=32.7702702702703, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1787374, Length=292, Percent_Identity=26.3698630136986, Blast_Score=99, Evalue=6e-22, Organism=Escherichia coli, GI1786600, Length=227, Percent_Identity=32.5991189427313, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1790551, Length=261, Percent_Identity=31.4176245210728, Blast_Score=78, Evalue=9e-16, Organism=Escherichia coli, GI1788713, Length=239, Percent_Identity=25.5230125523013, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789808, Length=287, Percent_Identity=27.8745644599303, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI145693157, Length=118, Percent_Identity=36.4406779661017, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786912, Length=251, Percent_Identity=29.4820717131474, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1789403, Length=341, Percent_Identity=29.3255131964809, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1788549, Length=212, Percent_Identity=26.8867924528302, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI87082128, Length=239, Percent_Identity=26.7782426778243, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=26.6949152542373, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 48000; Mature: 47869
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVEPGTPQGGWGRRVLAPVRVRVTLAATSVALVVGVVGAVLFVASLHRDLERALVASA CCCCCCCCCCCCCCCCEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQVETITAQLENGSTPAQAAVTARDDVITQILSPRGEIIGSDHPKISTRLRDSAGVSTS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCE VQVTGLDDTYVVVAAVAPSGELVTVAHSQEQLAQARRTAETLLTVALPLGLALLAAAVWL EEEEECCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGQALRPVESMRREAAQITTAHQDRRLPVPQGGDEISRLALTLNQMLERIGSSQRAQRQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH FASDASHELRSPLAVIRQLAEVARRHPDQADVVTLTNEILAEEGRMEELVAALLTLARLE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC DRDPATSHLVDLDDVVLAEVKRARPASGPEIDATGVGAGQVRGEEVLFGQVVRNLLSNAL CCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RHARSRVQVSLDEVDSRVRLVVADDGPGIPVSERERVFGRFVRLDDARARDEGGAGLGLA HHHHHHHEEEHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHH IVERVVTGLQGSVAVDEAPGGGARFTVTLPAAG HHHHHHHCCCCCEEEECCCCCCCEEEEEECCCC >Mature Secondary Structure SRVEPGTPQGGWGRRVLAPVRVRVTLAATSVALVVGVVGAVLFVASLHRDLERALVASA CCCCCCCCCCCCCCCEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQQVETITAQLENGSTPAQAAVTARDDVITQILSPRGEIIGSDHPKISTRLRDSAGVSTS HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCE VQVTGLDDTYVVVAAVAPSGELVTVAHSQEQLAQARRTAETLLTVALPLGLALLAAAVWL EEEEECCCCEEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVGQALRPVESMRREAAQITTAHQDRRLPVPQGGDEISRLALTLNQMLERIGSSQRAQRQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH FASDASHELRSPLAVIRQLAEVARRHPDQADVVTLTNEILAEEGRMEELVAALLTLARLE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC DRDPATSHLVDLDDVVLAEVKRARPASGPEIDATGVGAGQVRGEEVLFGQVVRNLLSNAL CCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RHARSRVQVSLDEVDSRVRLVVADDGPGIPVSERERVFGRFVRLDDARARDEGGAGLGLA HHHHHHHEEEHHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHH IVERVVTGLQGSVAVDEAPGGGARFTVTLPAAG HHHHHHHCCCCCEEEECCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 2646639; 1925016; 1495392 [H]