Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715785

Identifier: 119715785

GI number: 119715785

Start: 1642062

End: 1643333

Strand: Reverse

Name: 119715785

Synonym: Noca_1549

Alternate gene names: NA

Gene position: 1643333-1642062 (Counterclockwise)

Preceding gene: 119715786

Following gene: 119715770

Centisome position: 32.96

GC content: 71.38

Gene sequence:

>1272_bases
GTGACGCAGACACCCGCGAGCGCCGCCACATCGACCACTCAGAGCGGAGCATGGTCGCCGTGGCGAACGGTCCTCGCCTT
CGGCCTCGTCAGCTTGGCCGCCGACATGGTCTACGAAGGCATGCGGGCAACGGCCGGACCCTTCCTCGGCACCCTCGGCG
CGTCTGCGCTCACCGTGGGCCTGGTCACCGGCGCCGGCGAAGGCATCGCGCTGGTACTCCGGCTGGTCACCGGCGTCTGG
GCCGACCGGAGCCACCACCACTGGCGGCTGACCGTCCTCGGCTACGCCATGACCGCCGTCTGCGTCCCGCTGCTCGCGAT
CACCCCGTTCATCGGCGTTGCCGGGCTCGCCGTCGCCGCAACCCTGATCCTGCTCGAGCGCACTGGAAAGGCCGTCCGCA
GTCCGGCAAAGTCCGCCCTGCTTGCACGGATGGCGACCGCGACCGGCCGAGGCAAGGGATTCGCAGTCCACAAGGCCCTC
GACCAGATAGGCGCCTTCTCCGGACCGCTCCTCCTGGCCGGAGTCGCGGCCGCGACCGGTGTGCTGTGGCCGGGCTTCGC
GATCCTGGCGATTCCCGGGGCGCTCTCCCTCGTGCTGCTGGCACAGCTGCGCCTTCGGGCACCGATCGTGACCGAACCCG
AGCGCGACGACGCGCCCCTTCCGGCAACGAGCGCGCTCGTGGCTGTCGGCAAGGCGGTGGTGGGCAGCGATCTGCCGCGC
GCGTTCCACCTCTTCGCCCTGGCCACCGCGATGATGACTGCTGGCCTGATGACGTTCGGGGTCATCTCATTCCGCCTCGT
ACAAGACGGGCTCCTGGCCGCAGCCGCCGTCCCCCTCGCGTACGCCCTCGCCATGGCCGTCGAGGCCATTGCCGCCCTCG
GCACCGGGCACCTCTTCGACCGCCGAGGTGGTCGCGTCCTGCTGGCCGTCCCGGTTCTCGTCGCGATCGTGCCACTCTGC
GTCTTCGCTACCCAACTGTGGCTGGTGCTCGTCGGCATCGTCGTGTGGGGCGTCGCCACCGGCATCCAGGACTCGACCGT
CAAGGCCTACGTCGCCGACCTCGTCCCCGCGCCCCGCCGAGCCACCGCCTATGGGGTCTTCGCCGCCGTCCAAGGACTCG
GTGCGCTCGCCGGCGGTGGCCTCGCCGGCGCGCTGGTCACCGGTCACGTCCCGATCCTGGCAGCCGTCATCGGCGGGCTT
CAGGCGGTCGCGTTCATGCTCCTGATGCGCCTCACCCGTCGCGAGTCCGGGGCGCCGGCCGAGTCGCGCTGA

Upstream 100 bases:

>100_bases
TGCACGCGACAGAGCGCCTCCTGGGCGGACCGCTCGCCTCGGCAGCCGTCGGCCCCCTCCGGGACCACTGGTCCAGCGGT
TCCTGCGAGAATCTGTCCAC

Downstream 100 bases:

>100_bases
CCGCCGCAGACCCCTCGTCGAGACCAAACCTTCTGTGCCACCGATCGGCAAAGGACGGACATGCGCGACAACCCCTGCGG
CCACCGCGGCTCGTCAGCCC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 422

Protein sequence:

>423_residues
MTQTPASAATSTTQSGAWSPWRTVLAFGLVSLAADMVYEGMRATAGPFLGTLGASALTVGLVTGAGEGIALVLRLVTGVW
ADRSHHHWRLTVLGYAMTAVCVPLLAITPFIGVAGLAVAATLILLERTGKAVRSPAKSALLARMATATGRGKGFAVHKAL
DQIGAFSGPLLLAGVAAATGVLWPGFAILAIPGALSLVLLAQLRLRAPIVTEPERDDAPLPATSALVAVGKAVVGSDLPR
AFHLFALATAMMTAGLMTFGVISFRLVQDGLLAAAAVPLAYALAMAVEAIAALGTGHLFDRRGGRVLLAVPVLVAIVPLC
VFATQLWLVLVGIVVWGVATGIQDSTVKAYVADLVPAPRRATAYGVFAAVQGLGALAGGGLAGALVTGHVPILAAVIGGL
QAVAFMLLMRLTRRESGAPAESR

Sequences:

>Translated_423_residues
MTQTPASAATSTTQSGAWSPWRTVLAFGLVSLAADMVYEGMRATAGPFLGTLGASALTVGLVTGAGEGIALVLRLVTGVW
ADRSHHHWRLTVLGYAMTAVCVPLLAITPFIGVAGLAVAATLILLERTGKAVRSPAKSALLARMATATGRGKGFAVHKAL
DQIGAFSGPLLLAGVAAATGVLWPGFAILAIPGALSLVLLAQLRLRAPIVTEPERDDAPLPATSALVAVGKAVVGSDLPR
AFHLFALATAMMTAGLMTFGVISFRLVQDGLLAAAAVPLAYALAMAVEAIAALGTGHLFDRRGGRVLLAVPVLVAIVPLC
VFATQLWLVLVGIVVWGVATGIQDSTVKAYVADLVPAPRRATAYGVFAAVQGLGALAGGGLAGALVTGHVPILAAVIGGL
QAVAFMLLMRLTRRESGAPAESR
>Mature_422_residues
TQTPASAATSTTQSGAWSPWRTVLAFGLVSLAADMVYEGMRATAGPFLGTLGASALTVGLVTGAGEGIALVLRLVTGVWA
DRSHHHWRLTVLGYAMTAVCVPLLAITPFIGVAGLAVAATLILLERTGKAVRSPAKSALLARMATATGRGKGFAVHKALD
QIGAFSGPLLLAGVAAATGVLWPGFAILAIPGALSLVLLAQLRLRAPIVTEPERDDAPLPATSALVAVGKAVVGSDLPRA
FHLFALATAMMTAGLMTFGVISFRLVQDGLLAAAAVPLAYALAMAVEAIAALGTGHLFDRRGGRVLLAVPVLVAIVPLCV
FATQLWLVLVGIVVWGVATGIQDSTVKAYVADLVPAPRRATAYGVFAAVQGLGALAGGGLAGALVTGHVPILAAVIGGLQ
AVAFMLLMRLTRRESGAPAESR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42971; Mature: 42840

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTPASAATSTTQSGAWSPWRTVLAFGLVSLAADMVYEGMRATAGPFLGTLGASALTVG
CCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LVTGAGEGIALVLRLVTGVWADRSHHHWRLTVLGYAMTAVCVPLLAITPFIGVAGLAVAA
HHHCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLILLERTGKAVRSPAKSALLARMATATGRGKGFAVHKALDQIGAFSGPLLLAGVAAATG
HHHHHHHHCHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
VLWPGFAILAIPGALSLVLLAQLRLRAPIVTEPERDDAPLPATSALVAVGKAVVGSDLPR
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
AFHLFALATAMMTAGLMTFGVISFRLVQDGLLAAAAVPLAYALAMAVEAIAALGTGHLFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RRGGRVLLAVPVLVAIVPLCVFATQLWLVLVGIVVWGVATGIQDSTVKAYVADLVPAPRR
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCH
ATAYGVFAAVQGLGALAGGGLAGALVTGHVPILAAVIGGLQAVAFMLLMRLTRRESGAPA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ESR
CCC
>Mature Secondary Structure 
TQTPASAATSTTQSGAWSPWRTVLAFGLVSLAADMVYEGMRATAGPFLGTLGASALTVG
CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LVTGAGEGIALVLRLVTGVWADRSHHHWRLTVLGYAMTAVCVPLLAITPFIGVAGLAVAA
HHHCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLILLERTGKAVRSPAKSALLARMATATGRGKGFAVHKALDQIGAFSGPLLLAGVAAATG
HHHHHHHHCHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH
VLWPGFAILAIPGALSLVLLAQLRLRAPIVTEPERDDAPLPATSALVAVGKAVVGSDLPR
HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHH
AFHLFALATAMMTAGLMTFGVISFRLVQDGLLAAAAVPLAYALAMAVEAIAALGTGHLFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RRGGRVLLAVPVLVAIVPLCVFATQLWLVLVGIVVWGVATGIQDSTVKAYVADLVPAPRR
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCH
ATAYGVFAAVQGLGALAGGGLAGALVTGHVPILAAVIGGLQAVAFMLLMRLTRRESGAPA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
ESR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]