Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119715770

Identifier: 119715770

GI number: 119715770

Start: 1629121

End: 1629666

Strand: Reverse

Name: 119715770

Synonym: Noca_1534

Alternate gene names: NA

Gene position: 1629666-1629121 (Counterclockwise)

Preceding gene: 119715785

Following gene: 119715769

Centisome position: 32.69

GC content: 71.25

Gene sequence:

>546_bases
ATGGTTTGTAACCATGGTTACAGTACCCGTGTGACTGGTTCGGGCAAGGTCGGCGAGTGGGTGTTCCTCACCTATGCACT
GCCTCGGAACCCGTCCGCTCCCAGGTTGGCGCTGTGGCGTCGACTGAAGCGGCTCGGGGTGGCCCAGCTCGCCGACGGCC
TGGTGGCCCTGCCGGCGGACTCGCGCACGCGCGAGCAGTTGGAGTGGGCCGCCGACGAGGTGGTCGGCAACGGTGGCCGC
GCCGGGGTGTGGCTGGCCCAGCCGGCGACCCGGGCCCAGGAGCGCGAGATCAAGGAGTCCATGAACACTGCCCGCGCCGC
GGAGTACGACGTGGTCATCGCCGATGCCCGAGAAGCCCTGCAGCGCCCCGACGTCGAACGCACCCGGGCGCTGCGGCGAC
TGCGTGAGGAGAACCGCCGGATCCGGCGGCGCGACTTCTTCCGGCCGGCCCAGCGCGAGACGGCGCGACGTCTGCTGGAC
GAGTTGGCGGCCTCGGTCGCCACGGCGGACGCCGTGACCACGGTCGACACCGAGGTGTCGCCGTGA

Upstream 100 bases:

>100_bases
GCGAGACCGCCTCCCGCGAGCGTGACGAGCAGGGCGACGACCGCCAAGCCGATGAGGCGGGTTCGGCGGCGTGGGGCACG
CATCGTGAGACCTTCCGGGA

Downstream 100 bases:

>100_bases
GGTGGGCGACCCGCGCCGGCGTCCACATCGACCGGGCCGCCTGCGCCTGGCTGATCCGGCGATACGTCGACCCCGAGGCC
GAGTTCGCCTTCGTCACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MVCNHGYSTRVTGSGKVGEWVFLTYALPRNPSAPRLALWRRLKRLGVAQLADGLVALPADSRTREQLEWAADEVVGNGGR
AGVWLAQPATRAQEREIKESMNTARAAEYDVVIADAREALQRPDVERTRALRRLREENRRIRRRDFFRPAQRETARRLLD
ELAASVATADAVTTVDTEVSP

Sequences:

>Translated_181_residues
MVCNHGYSTRVTGSGKVGEWVFLTYALPRNPSAPRLALWRRLKRLGVAQLADGLVALPADSRTREQLEWAADEVVGNGGR
AGVWLAQPATRAQEREIKESMNTARAAEYDVVIADAREALQRPDVERTRALRRLREENRRIRRRDFFRPAQRETARRLLD
ELAASVATADAVTTVDTEVSP
>Mature_181_residues
MVCNHGYSTRVTGSGKVGEWVFLTYALPRNPSAPRLALWRRLKRLGVAQLADGLVALPADSRTREQLEWAADEVVGNGGR
AGVWLAQPATRAQEREIKESMNTARAAEYDVVIADAREALQRPDVERTRALRRLREENRRIRRRDFFRPAQRETARRLLD
ELAASVATADAVTTVDTEVSP

Specific function: Unknown

COG id: COG4275

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20320; Mature: 20320

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVCNHGYSTRVTGSGKVGEWVFLTYALPRNPSAPRLALWRRLKRLGVAQLADGLVALPAD
CCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC
SRTREQLEWAADEVVGNGGRAGVWLAQPATRAQEREIKESMNTARAAEYDVVIADAREAL
CHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHH
QRPDVERTRALRRLREENRRIRRRDFFRPAQRETARRLLDELAASVATADAVTTVDTEVS
HCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
P
C
>Mature Secondary Structure
MVCNHGYSTRVTGSGKVGEWVFLTYALPRNPSAPRLALWRRLKRLGVAQLADGLVALPAD
CCCCCCCCEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCC
SRTREQLEWAADEVVGNGGRAGVWLAQPATRAQEREIKESMNTARAAEYDVVIADAREAL
CHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHH
QRPDVERTRALRRLREENRRIRRRDFFRPAQRETARRLLDELAASVATADAVTTVDTEVS
HCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA