Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is yedI [H]

Identifier: 119715667

GI number: 119715667

Start: 1515287

End: 1516231

Strand: Direct

Name: yedI [H]

Synonym: Noca_1431

Alternate gene names: 119715667

Gene position: 1515287-1516231 (Clockwise)

Preceding gene: 119715666

Following gene: 119715668

Centisome position: 30.39

GC content: 71.85

Gene sequence:

>945_bases
ATGGCTGGAGGCTTGTTCGCGCTGCTCGACGACGTCGCCGCGCTCGCGCGGCTGGCCGCCGCCTCGGTCGACGACGTCGG
CGCGGCCGCCGGCCGGGCGACCACCAAGGCCGCGGGCGTGGTCGTCGACGACACCGCGGTCACCCCGCAGTACGTCCACG
GCGTCACCGCCGACCGCGAGCTGCCGATGATCCGACGGATCGCGATCGGCTCGATCCGGAACAAGCTGCTGCTGATCCTG
CCGGTCGCGCTCGTGCTCAGCCAGTTCCTGCCGTGGCTGCTCACCCCGATCCTGATGCTCGGCGGCGGCTACCTCTGCTT
CGAGGGCGCCGAGAAGGTCTGGGGCCGGGTCCGCGGCCACGACGGGCACGCGGTGCCGGTGACCGAGGTCGGCGCCGACG
CCGAGAAGACGATGGTGAGCGGCGCGATCCGTACCGACCTGATCCTCTCGGCCGAGATCATGGTGATCGCGCTCAACGAG
GTCGCCGACGAGCCGTTCCTCAGCCGCCTGGTGATCCTCGTGGTCGTCGCGATCGTCATCACCGTCGCGGTGTACGGCGT
CGTCGGGGTGATCGTGAAGATCGACGACGTCGGCCTGCGCCTCGCCCAGCGGTCCTCCGCCCTCGCGCGTCGGGTGGGGC
ACGGGCTCGTCGGGTTCATGCCGCGTCTGCTCGCGGCGATCTCGGTGGTCGGCACCGCCGCGATGCTCTGGGTCGGCGGC
CACATCGAGCTCGTCGGCCTCGATGATCTCGGCTGGCACGCGCCGTACGACGCGGTCCACCACCTGGAGGAGAAGGTCCA
CCACGCGGTCCCGGGCGCCGGTGCGGCGCTCGGCTGGCTGGTGAACACCGTCCTCTCCGCCGTCCTCGGTCTCCTGGTCG
GCGCCGTGGTCGTGCTCCTCGCACACCTGTTGCCCTCCGGCAAGAAGCCCGCCGCCGCCCACTGA

Upstream 100 bases:

>100_bases
CGACACCGGCGACCCGCTCGCGGAGGACTCCGCCTGCGTGTACCAGCCCGCCCTGGCCTGACGACGGGATCCTCACGGCC
CGCCCGATAGCCTGCTGACC

Downstream 100 bases:

>100_bases
CGCTCGGTCGGGACTTCTGGCGGTCGAGTCGGGACTTCCTTGCCCTCGGGGTGACCGAGACTCCCGACCCGACCAGTCGG
CGGGGTCGCGGGTGGGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MAGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRELPMIRRIAIGSIRNKLLLIL
PVALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGHDGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNE
VADEPFLSRLVILVVVAIVITVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGG
HIELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLLAHLLPSGKKPAAAH

Sequences:

>Translated_314_residues
MAGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRELPMIRRIAIGSIRNKLLLIL
PVALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGHDGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNE
VADEPFLSRLVILVVVAIVITVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGG
HIELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLLAHLLPSGKKPAAAH
>Mature_313_residues
AGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRELPMIRRIAIGSIRNKLLLILP
VALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGHDGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNEV
ADEPFLSRLVILVVVAIVITVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGGH
IELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLLAHLLPSGKKPAAAH

Specific function: Unknown

COG id: COG2354

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788268, Length=305, Percent_Identity=42.6229508196721, Blast_Score=208, Evalue=4e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008526 [H]

Pfam domain/function: PF05661 DUF808 [H]

EC number: NA

Molecular weight: Translated: 32597; Mature: 32466

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRE
CCCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHCCEEEECCCCCHHHHHCCCCCCC
LPMIRRIAIGSIRNKLLLILPVALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCC
DGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNEVADEPFLSRLVILVVVAIVI
CCCCCCHHHCCCCHHHHHHHHHHHHHHHEEHHHHEEEHHHHCCCHHHHHHHHHHHHHHHH
TVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGG
HHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECC
HIELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLL
EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHLLPSGKKPAAAH
HHHCCCCCCCCCCC
>Mature Secondary Structure 
AGGLFALLDDVAALARLAAASVDDVGAAAGRATTKAAGVVVDDTAVTPQYVHGVTADRE
CCHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHHCCEEEECCCCCHHHHHCCCCCCC
LPMIRRIAIGSIRNKLLLILPVALVLSQFLPWLLTPILMLGGGYLCFEGAEKVWGRVRGH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHCCC
DGHAVPVTEVGADAEKTMVSGAIRTDLILSAEIMVIALNEVADEPFLSRLVILVVVAIVI
CCCCCCHHHCCCCHHHHHHHHHHHHHHHEEHHHHEEEHHHHCCCHHHHHHHHHHHHHHHH
TVAVYGVVGVIVKIDDVGLRLAQRSSALARRVGHGLVGFMPRLLAAISVVGTAAMLWVGG
HHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECC
HIELVGLDDLGWHAPYDAVHHLEEKVHHAVPGAGAALGWLVNTVLSAVLGLLVGAVVVLL
EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AHLLPSGKKPAAAH
HHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]