| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is add1 [H]
Identifier: 119715591
GI number: 119715591
Start: 1432838
End: 1433884
Strand: Direct
Name: add1 [H]
Synonym: Noca_1355
Alternate gene names: 119715591
Gene position: 1432838-1433884 (Clockwise)
Preceding gene: 119715590
Following gene: 119715592
Centisome position: 28.74
GC content: 72.78
Gene sequence:
>1047_bases GTGAGTACCCGGGACCCCCTCGCCACCTTCATCGCCGGACTGCCCAAGGCCGAGCTGCACGTCCACCATGTCGGGTCCGC GTCGCCTCGGATCGTCTCCGAGCTCGCCGAGCGGCATCCGGGGACTGTCCCGAGCGACCCGGACGCCCTGCGTCGGTTCT TCGAGTTCCGCGACTTCGCGCACTTCGTCGAGGTCTACCTCGCGGTGGTCGACCTGATCCGTACGCCCGAGGACATCCGC TACCTGACCCACGAGATCGGGCGGGAGATGGCCACGGGCCAGGGCCTGCGGTACGCCGAGCTCACGTGCACGCCGTACAC CTCAGTGCGACCGCACGAGGAGGGCAAGGGCATGCCGATCGAGGCCTACACCGAGGCGATCGAGGACGCCCGGGTCGCGG TCGAGCGTGACTTCGGTCTGGTGCTGCGCTGGATCTACGACATCCCCGGCGAGTTCGGCCTGCCCGCCGCCGACGCCACG CTCGGGTACGCCCTCGGCCACCGCCCGGAGGCCCTGGTCGGCTTCGGGCTCGGCGGCCCCGAGATCGGGGTGCCGCGACC CCAGTTCCGACCGCACTTCGACGCGGCTCGCGCGGCCGGCCTGCACAGCGTCCCGCACGCGGGGGAGACGACCGGCCCCG AGACGGTCCGGCACGCGATCGAGCTGCTGGGCGCGGAGCGGATCGGGCACGGCACGTCGTCCGCCCAGGACGCCGGGCTC CTGGCGCTGCTCGCCGAGCGCGGTATCCCGCTCGAGGTGTGCCCCTCCTCGAACGTCGCGACCCGGGCGGTGGCCGACCT GGCGGAGCACCCGATCCGGGCGTTCCGCGACGCGGGCGTGGTCGTGACGGTCAACTCCGACGACCCGCCGATGTTCAACA CCACGCTGAACCGCGAGTACGAGGTGGCGGCCGGGCTGCTCGGCCTCGACCGGGCCGGAGTGGCCGAGCTGGCGCGCACC GCCGTACGTGCGTCGTTCGCCGAGCTCGACGTCCAGGCCCGGATCCTGGGAGAGATCGACGCCTACGTCGCGTCCGGTCC GGCCTGA
Upstream 100 bases:
>100_bases GGGAACGGTGCGTAGTCCCGGCGACCGGAGGGGGCGACCCCGGGCCCACCGACGCGGCGTGGATTCCGCTTCGGCGCCCG GCGCTGACAGACTCCGTCGG
Downstream 100 bases:
>100_bases CGCCGGCTTCTCCGGGCCGGAAGAAGGAATGGGCCCCGCGAGCTCATACCAAGCGGGGCCGACACCTTTGTATCCCGAAC GGGGCCGGATTCCTGGGATT
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase 1 [H]
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSTRDPLATFIAGLPKAELHVHHVGSASPRIVSELAERHPGTVPSDPDALRRFFEFRDFAHFVEVYLAVVDLIRTPEDIR YLTHEIGREMATGQGLRYAELTCTPYTSVRPHEEGKGMPIEAYTEAIEDARVAVERDFGLVLRWIYDIPGEFGLPAADAT LGYALGHRPEALVGFGLGGPEIGVPRPQFRPHFDAARAAGLHSVPHAGETTGPETVRHAIELLGAERIGHGTSSAQDAGL LALLAERGIPLEVCPSSNVATRAVADLAEHPIRAFRDAGVVVTVNSDDPPMFNTTLNREYEVAAGLLGLDRAGVAELART AVRASFAELDVQARILGEIDAYVASGPA
Sequences:
>Translated_348_residues MSTRDPLATFIAGLPKAELHVHHVGSASPRIVSELAERHPGTVPSDPDALRRFFEFRDFAHFVEVYLAVVDLIRTPEDIR YLTHEIGREMATGQGLRYAELTCTPYTSVRPHEEGKGMPIEAYTEAIEDARVAVERDFGLVLRWIYDIPGEFGLPAADAT LGYALGHRPEALVGFGLGGPEIGVPRPQFRPHFDAARAAGLHSVPHAGETTGPETVRHAIELLGAERIGHGTSSAQDAGL LALLAERGIPLEVCPSSNVATRAVADLAEHPIRAFRDAGVVVTVNSDDPPMFNTTLNREYEVAAGLLGLDRAGVAELART AVRASFAELDVQARILGEIDAYVASGPA >Mature_347_residues STRDPLATFIAGLPKAELHVHHVGSASPRIVSELAERHPGTVPSDPDALRRFFEFRDFAHFVEVYLAVVDLIRTPEDIRY LTHEIGREMATGQGLRYAELTCTPYTSVRPHEEGKGMPIEAYTEAIEDARVAVERDFGLVLRWIYDIPGEFGLPAADATL GYALGHRPEALVGFGLGGPEIGVPRPQFRPHFDAARAAGLHSVPHAGETTGPETVRHAIELLGAERIGHGTSSAQDAGLL ALLAERGIPLEVCPSSNVATRAVADLAEHPIRAFRDAGVVVTVNSDDPPMFNTTLNREYEVAAGLLGLDRAGVAELARTA VRASFAELDVQARILGEIDAYVASGPA
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=344, Percent_Identity=25, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI29029552, Length=128, Percent_Identity=33.59375, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI29029550, Length=128, Percent_Identity=33.59375, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI61175224, Length=235, Percent_Identity=26.3829787234043, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1787910, Length=318, Percent_Identity=31.7610062893082, Blast_Score=151, Evalue=7e-38, Organism=Caenorhabditis elegans, GI32565969, Length=158, Percent_Identity=32.9113924050633, Blast_Score=85, Evalue=6e-17, Organism=Caenorhabditis elegans, GI17538512, Length=214, Percent_Identity=29.4392523364486, Blast_Score=85, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6324188, Length=349, Percent_Identity=26.3610315186246, Blast_Score=105, Evalue=8e-24, Organism=Drosophila melanogaster, GI24645260, Length=343, Percent_Identity=27.9883381924198, Blast_Score=108, Evalue=4e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 37427; Mature: 37295
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRDPLATFIAGLPKAELHVHHVGSASPRIVSELAERHPGTVPSDPDALRRFFEFRDFA CCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH HFVEVYLAVVDLIRTPEDIRYLTHEIGREMATGQGLRYAELTCTPYTSVRPHEEGKGMPI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCH EAYTEAIEDARVAVERDFGLVLRWIYDIPGEFGLPAADATLGYALGHRPEALVGFGLGGP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC EIGVPRPQFRPHFDAARAAGLHSVPHAGETTGPETVRHAIELLGAERIGHGTSSAQDAGL CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH LALLAERGIPLEVCPSSNVATRAVADLAEHPIRAFRDAGVVVTVNSDDPPMFNTTLNREY HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCCCH EVAAGLLGLDRAGVAELARTAVRASFAELDVQARILGEIDAYVASGPA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure STRDPLATFIAGLPKAELHVHHVGSASPRIVSELAERHPGTVPSDPDALRRFFEFRDFA CCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH HFVEVYLAVVDLIRTPEDIRYLTHEIGREMATGQGLRYAELTCTPYTSVRPHEEGKGMPI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCH EAYTEAIEDARVAVERDFGLVLRWIYDIPGEFGLPAADATLGYALGHRPEALVGFGLGGP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC EIGVPRPQFRPHFDAARAAGLHSVPHAGETTGPETVRHAIELLGAERIGHGTSSAQDAGL CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH LALLAERGIPLEVCPSSNVATRAVADLAEHPIRAFRDAGVVVTVNSDDPPMFNTTLNREY HHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEECCCCCCH EVAAGLLGLDRAGVAELARTAVRASFAELDVQARILGEIDAYVASGPA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]