Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119715590

Identifier: 119715590

GI number: 119715590

Start: 1431351

End: 1432841

Strand: Direct

Name: 119715590

Synonym: Noca_1354

Alternate gene names: NA

Gene position: 1431351-1432841 (Clockwise)

Preceding gene: 119715589

Following gene: 119715591

Centisome position: 28.71

GC content: 74.58

Gene sequence:

>1491_bases
ATGGCAGCCCTCCCCGTCGAGCACCCCGACCCGGAGTCCACCGACTCCGCGGCCGGGGTGCTGGCTGCGCTCGAGTCGAC
GCACACGGTGCTGGCTGATGCGGAGATCGGGCAGTTCCGGCTGGCCGTGGAGTGGGCGATCGCGCACCCGATCACCTCGG
TCGCCGACATCGCCACCGTGGAGGGCACCGAAGGCGAGGTCGCGATCGCCGGGACGGGTGCCCCGCTGGTGGCGGAGTTC
TGTGTCGCGGACTTCGCCGCCGCGATCGGGATCACCACCGACGCGGGCCGGGCCTACCTGGGGGACGCGGTCGAGGTCTG
CTACCGGCTCCCCCGACTGTGGGCCCAGGTCATGGGCGGGCGGGTGCCGGTGTGGAAGGCCCGCCGGATCGCCGCCCACA
CCCACTCCCTCTCCTTCGAGGGCGCCGCCTGTGTGGACCGGCACCTGGCCCCGATCGCGCACCGGGTCTCCTACGCCCAG
ATCGACCGCACCGTCGACGCCGCCCGAGCCCTGCACGACCCGGCTGCGGCCGAGCAACGCCGCCGCGAGGCCGCCGAGAC
CCGGTTCTGCGACGTCGACACCACCCAGGTCGGCCTCCAGGGCACCATGACCGTGCGCGGCGAGCTGGACCTGGCCGACG
CCCTCGACCTCGACCAGGCCCTGCGACACGGCGCCCAACAGCTCGCCGACCTCGGCTGCACCGAGACGTTGAACGTGCGC
CGCGCCCTGGCCGTGGGTGCCCTGGCCCGCGGCGACCTCACCCTCGGACTCGACACCCAGCAGCCCGCCACCCACACCGG
CACCGAGGCGACGGCTGACACCGAGGCGGCGCCGGGTCCGGCCCGGCCTCAGCGGTCCCGGCGGGGCCGCGGGCTGATGC
TGTACGCGCACCTGACCGACGACGCGGTCCGCGGCCTGCTCGCGACCGTGGAGAACACCCGCTCGGAGGTCCTGGTCGGG
CAGGTCGCCGGCTGGTGCGCCACCGCGACCGGTCCGGTCACCATCCGGCCGGTCCTGGACCTGCACGAACACCTGCAGGT
CCCCGGCTACCGGCCCTCCCCACGGCTACGCGAACAAGTCCTCCTCACCCACCCCACCTGCGTGTTCCCCCACTGCACCC
GGCCATCCCGCTCCTGCGACCTCGACCACGTCATCCCCTGGGCCGAGGGCGGCCCCACCTGCTCGTGCAACCTGGTGCCG
GCGCGGCCTGCCGGTTCCACCACCGGCTCCGCACCCACGGCGGCTGGCGGCTGCACCGCGTCGGCGAACGACTCTTCGTC
TGGACCAGCCCCCACGGCCGCACCTACACCCGACATCTGTGACCACCCGACCCCGCCGGCCACGGCCGACGGGGCCACTC
CCATGCTCAGGGCGCGGCTACTCGGACGGGAACGGTGCGTAGTCCCGGCGACCGGAGGGGGCGACCCCGGGCCCACCGAC
GCGGCGTGGATTCCGCTTCGGCGCCCGGCGCTGACAGACTCCGTCGGGTGA

Upstream 100 bases:

>100_bases
CAGGTGACGGCGAAGATTTTACTTTCGGATCTCCCGGAACCCTGTGGAACAAGGGGTTCTGGGCCGCTCGATGTCGGTGG
CCGGTGCTTGGGTTGAACAC

Downstream 100 bases:

>100_bases
GTACCCGGGACCCCCTCGCCACCTTCATCGCCGGACTGCCCAAGGCCGAGCTGCACGTCCACCATGTCGGGTCCGCGTCG
CCTCGGATCGTCTCCGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 495

Protein sequence:

>496_residues
MAALPVEHPDPESTDSAAGVLAALESTHTVLADAEIGQFRLAVEWAIAHPITSVADIATVEGTEGEVAIAGTGAPLVAEF
CVADFAAAIGITTDAGRAYLGDAVEVCYRLPRLWAQVMGGRVPVWKARRIAAHTHSLSFEGAACVDRHLAPIAHRVSYAQ
IDRTVDAARALHDPAAAEQRRREAAETRFCDVDTTQVGLQGTMTVRGELDLADALDLDQALRHGAQQLADLGCTETLNVR
RALAVGALARGDLTLGLDTQQPATHTGTEATADTEAAPGPARPQRSRRGRGLMLYAHLTDDAVRGLLATVENTRSEVLVG
QVAGWCATATGPVTIRPVLDLHEHLQVPGYRPSPRLREQVLLTHPTCVFPHCTRPSRSCDLDHVIPWAEGGPTCSCNLVP
ARPAGSTTGSAPTAAGGCTASANDSSSGPAPTAAPTPDICDHPTPPATADGATPMLRARLLGRERCVVPATGGGDPGPTD
AAWIPLRRPALTDSVG

Sequences:

>Translated_496_residues
MAALPVEHPDPESTDSAAGVLAALESTHTVLADAEIGQFRLAVEWAIAHPITSVADIATVEGTEGEVAIAGTGAPLVAEF
CVADFAAAIGITTDAGRAYLGDAVEVCYRLPRLWAQVMGGRVPVWKARRIAAHTHSLSFEGAACVDRHLAPIAHRVSYAQ
IDRTVDAARALHDPAAAEQRRREAAETRFCDVDTTQVGLQGTMTVRGELDLADALDLDQALRHGAQQLADLGCTETLNVR
RALAVGALARGDLTLGLDTQQPATHTGTEATADTEAAPGPARPQRSRRGRGLMLYAHLTDDAVRGLLATVENTRSEVLVG
QVAGWCATATGPVTIRPVLDLHEHLQVPGYRPSPRLREQVLLTHPTCVFPHCTRPSRSCDLDHVIPWAEGGPTCSCNLVP
ARPAGSTTGSAPTAAGGCTASANDSSSGPAPTAAPTPDICDHPTPPATADGATPMLRARLLGRERCVVPATGGGDPGPTD
AAWIPLRRPALTDSVG
>Mature_495_residues
AALPVEHPDPESTDSAAGVLAALESTHTVLADAEIGQFRLAVEWAIAHPITSVADIATVEGTEGEVAIAGTGAPLVAEFC
VADFAAAIGITTDAGRAYLGDAVEVCYRLPRLWAQVMGGRVPVWKARRIAAHTHSLSFEGAACVDRHLAPIAHRVSYAQI
DRTVDAARALHDPAAAEQRRREAAETRFCDVDTTQVGLQGTMTVRGELDLADALDLDQALRHGAQQLADLGCTETLNVRR
ALAVGALARGDLTLGLDTQQPATHTGTEATADTEAAPGPARPQRSRRGRGLMLYAHLTDDAVRGLLATVENTRSEVLVGQ
VAGWCATATGPVTIRPVLDLHEHLQVPGYRPSPRLREQVLLTHPTCVFPHCTRPSRSCDLDHVIPWAEGGPTCSCNLVPA
RPAGSTTGSAPTAAGGCTASANDSSSGPAPTAAPTPDICDHPTPPATADGATPMLRARLLGRERCVVPATGGGDPGPTDA
AWIPLRRPALTDSVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51753; Mature: 51621

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALPVEHPDPESTDSAAGVLAALESTHTVLADAEIGQFRLAVEWAIAHPITSVADIATV
CCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEEEHHHCCHHHHHHHEEE
EGTEGEVAIAGTGAPLVAEFCVADFAAAIGITTDAGRAYLGDAVEVCYRLPRLWAQVMGG
CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
RVPVWKARRIAAHTHSLSFEGAACVDRHLAPIAHRVSYAQIDRTVDAARALHDPAAAEQR
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RREAAETRFCDVDTTQVGLQGTMTVRGELDLADALDLDQALRHGAQQLADLGCTETLNVR
HHHHHHHCCCCCCCCEECCEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
RALAVGALARGDLTLGLDTQQPATHTGTEATADTEAAPGPARPQRSRRGRGLMLYAHLTD
HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCH
DAVRGLLATVENTRSEVLVGQVAGWCATATGPVTIRPVLDLHEHLQVPGYRPSPRLREQV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHE
LLTHPTCVFPHCTRPSRSCDLDHVIPWAEGGPTCSCNLVPARPAGSTTGSAPTAAGGCTA
EEECCCEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
SANDSSSGPAPTAAPTPDICDHPTPPATADGATPMLRARLLGRERCVVPATGGGDPGPTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCC
AAWIPLRRPALTDSVG
CEEEECCCCCCCCCCC
>Mature Secondary Structure 
AALPVEHPDPESTDSAAGVLAALESTHTVLADAEIGQFRLAVEWAIAHPITSVADIATV
CCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCEEEEEEEHHHCCHHHHHHHEEE
EGTEGEVAIAGTGAPLVAEFCVADFAAAIGITTDAGRAYLGDAVEVCYRLPRLWAQVMGG
CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
RVPVWKARRIAAHTHSLSFEGAACVDRHLAPIAHRVSYAQIDRTVDAARALHDPAAAEQR
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
RREAAETRFCDVDTTQVGLQGTMTVRGELDLADALDLDQALRHGAQQLADLGCTETLNVR
HHHHHHHCCCCCCCCEECCEEEEEEECCCCHHHHCCHHHHHHHHHHHHHHCCCCHHHHHH
RALAVGALARGDLTLGLDTQQPATHTGTEATADTEAAPGPARPQRSRRGRGLMLYAHLTD
HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCEEEEEEECCH
DAVRGLLATVENTRSEVLVGQVAGWCATATGPVTIRPVLDLHEHLQVPGYRPSPRLREQV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCCCCHHHHHHE
LLTHPTCVFPHCTRPSRSCDLDHVIPWAEGGPTCSCNLVPARPAGSTTGSAPTAAGGCTA
EEECCCEECCCCCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
SANDSSSGPAPTAAPTPDICDHPTPPATADGATPMLRARLLGRERCVVPATGGGDPGPTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCC
AAWIPLRRPALTDSVG
CEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA