Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119715558

Identifier: 119715558

GI number: 119715558

Start: 1394199

End: 1395014

Strand: Direct

Name: 119715558

Synonym: Noca_1322

Alternate gene names: NA

Gene position: 1394199-1395014 (Clockwise)

Preceding gene: 119715557

Following gene: 119715559

Centisome position: 27.96

GC content: 69.98

Gene sequence:

>816_bases
GTGACCGGGACCGCCTCCGCTCCGGGCCCCGGGCTGGGCCACGCGCTGGACCTGTCGTCGACCCGGCCGGTCCCGTTCAG
CCGGCTGGTCCGGGTCGAGCTGCGCAAGTCCTACGACACCCGCGCCGGCTTCTGGCTGCTCGCGGTGATCGGCCTGCTGG
TGCTGGCCGCGGAGATCATCGTGCTCGCCGTGGTGACGACGCAGGACGAGGCGATCGCGTTCGGCGACTTCATCGGCACC
GCGGCGTTCCTCACCTCGTTCCTCCTGCCGGTGCTCGGGATCATGGTGCTCACCAGCGAGTGGAGCCAACGCACCGCGAT
GGTCACCTTCGCCCTCGAGCCGCGCCGCCCGCTGGTGATCGGCGCCAAGGCGCTGGTCGGTGTGCTCCTGACCCTCGCCA
CGGTCGCGGTCTCGATCGTCGTCGGGCTGGTGTGCAACCTGCTCTACGGGCTGATCGAGGGCCACGCCGACTGGACCTTC
GGATGGTCGGACTTCGCCGCCTTCCTGATCACCCAGGTGCTTGCGATGCTCGGCGGCTTCGCGCTCGCGGCCCTGCTCCT
GAACACCCCGGCCGCGATCGTCGTGTTCTTCGTCTACAAGTGGGTGCTTCCTGGCCTCTTCGCGCTCGGCGCCGCGCTGA
TGGGCTGGTTCGACGCGCTGCAGCCCTGGATCGACTTCCAGAGCGCGCAGGAGGTCATCTGGGAGATGTCGGGCACTGGG
ACGGAGTGGGCCCAGCTGGTCGTGTCCGGGATCGTCTGGCTCGGCCTGCCCCTCGGGTTCGGCACCTGGCGGGTGCTGCG
CGCGGAGGTGAAGTAG

Upstream 100 bases:

>100_bases
GGGACCGACTGGGCGCACTTCGCGACCTCGGGCTTCATCTGGCTGGTCGTGCCACTGACCATCGGCTTCTGGCGGGTGCT
GCGGGCGGAGGTGAAGTGAG

Downstream 100 bases:

>100_bases
CCCCGGCTAGGGTCCTGGGCATGAGTGCAGCACCACGCGAGGACGGCCGGGCCGACGACGAGCTCCGTCCGATCACGATC
ACCCGGCACTGGCTGGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MTGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEIIVLAVVTTQDEAIAFGDFIGT
AAFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVIGAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTF
GWSDFAAFLITQVLAMLGGFALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTG
TEWAQLVVSGIVWLGLPLGFGTWRVLRAEVK

Sequences:

>Translated_271_residues
MTGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEIIVLAVVTTQDEAIAFGDFIGT
AAFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVIGAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTF
GWSDFAAFLITQVLAMLGGFALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTG
TEWAQLVVSGIVWLGLPLGFGTWRVLRAEVK
>Mature_270_residues
TGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEIIVLAVVTTQDEAIAFGDFIGTA
AFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVIGAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTFG
WSDFAAFLITQVLAMLGGFALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTGT
EWAQLVVSGIVWLGLPLGFGTWRVLRAEVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29080; Mature: 28949

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEII
CCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VLAVVTTQDEAIAFGDFIGTAAFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE
GAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTFGWSDFAAFLITQVLAMLGGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TEWAQLVVSGIVWLGLPLGFGTWRVLRAEVK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure 
TGTASAPGPGLGHALDLSSTRPVPFSRLVRVELRKSYDTRAGFWLLAVIGLLVLAAEII
CCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VLAVVTTQDEAIAFGDFIGTAAFLTSFLLPVLGIMVLTSEWSQRTAMVTFALEPRRPLVI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEEE
GAKALVGVLLTLATVAVSIVVGLVCNLLYGLIEGHADWTFGWSDFAAFLITQVLAMLGGF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ALAALLLNTPAAIVVFFVYKWVLPGLFALGAALMGWFDALQPWIDFQSAQEVIWEMSGTG
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TEWAQLVVSGIVWLGLPLGFGTWRVLRAEVK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA