Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715515

Identifier: 119715515

GI number: 119715515

Start: 1351987

End: 1353303

Strand: Reverse

Name: 119715515

Synonym: Noca_1279

Alternate gene names: NA

Gene position: 1353303-1351987 (Counterclockwise)

Preceding gene: 119715516

Following gene: 119715513

Centisome position: 27.14

GC content: 73.88

Gene sequence:

>1317_bases
ATGTCTCGGGGACACGCATGGGCCGGTGGCGGCCTGGCGGTCACCGCCGCGACGGCACTCGTCGTCGCCGGCGCGCTCGG
CGGCTGGCCGTGGTCCGGCGACGATGTCTACGGGGTCTACGGGCACTCGCTGGAGCGGTACGGCGACGAGCACGGCGAGC
CGAACCGCTACGTGAACCTCGAGGACGGCGCGGCCCAGCTCTCGCTCGGGTCGCCGGACGGCCACCGGATCGTCGTGCAG
TGGCGCGACCCGGACGGACACGGGTGGACCGAGCCCGAGACCGTGTGGACGGACCGGACGAACACCGCGATCGACAGCAC
CGTGCGCTACGGCGGCGGCACGGTCGGCATCGTCGAGACCTACACCCCAGACACCAGCGACGACGACGACAGCTCCGACG
TGCAGGTCGGCATCGTGTGCCGCGCCCTGGTCTGCGCGGCGACGCGGAAGCCGGGATTCGGCAGCGAGCCGCAGGTGACG
CCGGACGGGAAGGTCGTCTACCTCGGCCAGGACGAGCAGGCGGTCAGCCTCTGGACCGAGGGCGCGGGCTTCGCGCGCGC
ACGCTGGGCGGGGCACCCCGGCTTCGAGTACGGCGAGGTCTCGCCGTCTCGCCCGGTGCTGGCACCCGACGGGTCGCTGC
GGGTGGTCTCCTCGCGGCCCGCCCGCGGGAGCTGCACGTTCGAGCTGCTGGCCTCCGAGCCGCGGGCGGCCGACCTCTCC
GTGGTCGCCCGAAGCACCCGGCCGCTGCGCGGCGCGGCCGGGTCGGACTGTGCGTCGTACCTGGACACCTACAGTGCCGA
CTGGGTGGCGGTGCACCCCGACGACCACCGCGCCCGCGACTTCTGGTTCGTCCGGCGCGGCGAGACGTGGACCACGACGC
GCGAGGACCCCAGCGGCCTGGAGATCGTCGACACCGGCCGGGGCTGTTGCGACACGGCGGTCGCCGGCTTCGTGCACTGG
AACGACGTCGCCTACGGCTCGCCGGACGGCCGGCGGATCCAGGTGCAGACGCACCTGCTCGGCGACGAGACGTGGAGCGC
CCCGCTCCTGTTCGACGGCGCACCCGCGGGCTTCGCCTGCACCTGGCTCGAGGGCCGCGAGGTCGGGGACGGTTTCGTCG
TGCTGATGACCTGCCACTCCGGTGAGGTCCGCGACGAGTTCCGCGGTGACGCGTACGCCGTCGCCGCCACTCCGGACCTG
GCGCACTGGGAGTCGGCGTGGGCGACCGACGTCAGCGCCGACCCGGTGGTCGACGACGACCGGGTCGTGGTGGGCGACCT
GTCGTGGACGCCGGACGGCGGCTTCGACCAGGGCTGA

Upstream 100 bases:

>100_bases
ACGACGGCTCCTACCGGACCACCCACCACCCCAACGGCACCATCACCTACCACCGACGCACGTAGACCGACCGGCCCACC
GATGCACGTAGGCTCCGCCC

Downstream 100 bases:

>100_bases
CCCGGTCCCCCTCACGGCAAGGCCTCGGGCCATCACCGCTGCGTAAGGGCGATCCCGAGGCCTGCCGGCTACGTGCCTCC
TTGAATACTCCGAACTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MSRGHAWAGGGLAVTAATALVVAGALGGWPWSGDDVYGVYGHSLERYGDEHGEPNRYVNLEDGAAQLSLGSPDGHRIVVQ
WRDPDGHGWTEPETVWTDRTNTAIDSTVRYGGGTVGIVETYTPDTSDDDDSSDVQVGIVCRALVCAATRKPGFGSEPQVT
PDGKVVYLGQDEQAVSLWTEGAGFARARWAGHPGFEYGEVSPSRPVLAPDGSLRVVSSRPARGSCTFELLASEPRAADLS
VVARSTRPLRGAAGSDCASYLDTYSADWVAVHPDDHRARDFWFVRRGETWTTTREDPSGLEIVDTGRGCCDTAVAGFVHW
NDVAYGSPDGRRIQVQTHLLGDETWSAPLLFDGAPAGFACTWLEGREVGDGFVVLMTCHSGEVRDEFRGDAYAVAATPDL
AHWESAWATDVSADPVVDDDRVVVGDLSWTPDGGFDQG

Sequences:

>Translated_438_residues
MSRGHAWAGGGLAVTAATALVVAGALGGWPWSGDDVYGVYGHSLERYGDEHGEPNRYVNLEDGAAQLSLGSPDGHRIVVQ
WRDPDGHGWTEPETVWTDRTNTAIDSTVRYGGGTVGIVETYTPDTSDDDDSSDVQVGIVCRALVCAATRKPGFGSEPQVT
PDGKVVYLGQDEQAVSLWTEGAGFARARWAGHPGFEYGEVSPSRPVLAPDGSLRVVSSRPARGSCTFELLASEPRAADLS
VVARSTRPLRGAAGSDCASYLDTYSADWVAVHPDDHRARDFWFVRRGETWTTTREDPSGLEIVDTGRGCCDTAVAGFVHW
NDVAYGSPDGRRIQVQTHLLGDETWSAPLLFDGAPAGFACTWLEGREVGDGFVVLMTCHSGEVRDEFRGDAYAVAATPDL
AHWESAWATDVSADPVVDDDRVVVGDLSWTPDGGFDQG
>Mature_437_residues
SRGHAWAGGGLAVTAATALVVAGALGGWPWSGDDVYGVYGHSLERYGDEHGEPNRYVNLEDGAAQLSLGSPDGHRIVVQW
RDPDGHGWTEPETVWTDRTNTAIDSTVRYGGGTVGIVETYTPDTSDDDDSSDVQVGIVCRALVCAATRKPGFGSEPQVTP
DGKVVYLGQDEQAVSLWTEGAGFARARWAGHPGFEYGEVSPSRPVLAPDGSLRVVSSRPARGSCTFELLASEPRAADLSV
VARSTRPLRGAAGSDCASYLDTYSADWVAVHPDDHRARDFWFVRRGETWTTTREDPSGLEIVDTGRGCCDTAVAGFVHWN
DVAYGSPDGRRIQVQTHLLGDETWSAPLLFDGAPAGFACTWLEGREVGDGFVVLMTCHSGEVRDEFRGDAYAVAATPDLA
HWESAWATDVSADPVVDDDRVVVGDLSWTPDGGFDQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46892; Mature: 46761

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRGHAWAGGGLAVTAATALVVAGALGGWPWSGDDVYGVYGHSLERYGDEHGEPNRYVNL
CCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCEEEE
EDGAAQLSLGSPDGHRIVVQWRDPDGHGWTEPETVWTDRTNTAIDSTVRYGGGTVGIVET
CCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCHHHCEEEECCCEEEEEEE
YTPDTSDDDDSSDVQVGIVCRALVCAATRKPGFGSEPQVTPDGKVVYLGQDEQAVSLWTE
ECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEC
GAGFARARWAGHPGFEYGEVSPSRPVLAPDGSLRVVSSRPARGSCTFELLASEPRAADLS
CCCCEEEEECCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCEE
VVARSTRPLRGAAGSDCASYLDTYSADWVAVHPDDHRARDFWFVRRGETWTTTREDPSGL
EEEECCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCEEECCCCCCCCC
EIVDTGRGCCDTAVAGFVHWNDVAYGSPDGRRIQVQTHLLGDETWSAPLLFDGAPAGFAC
EEEECCCCHHHHHHHCEEEECCEECCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCEEE
TWLEGREVGDGFVVLMTCHSGEVRDEFRGDAYAVAATPDLAHWESAWATDVSADPVVDDD
EEECCCCCCCCEEEEEEECCCCCHHHHCCCEEEEEECCCHHHHCCHHCCCCCCCCCCCCC
RVVVGDLSWTPDGGFDQG
CEEEEECEECCCCCCCCC
>Mature Secondary Structure 
SRGHAWAGGGLAVTAATALVVAGALGGWPWSGDDVYGVYGHSLERYGDEHGEPNRYVNL
CCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCEEEE
EDGAAQLSLGSPDGHRIVVQWRDPDGHGWTEPETVWTDRTNTAIDSTVRYGGGTVGIVET
CCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCCHHHCEEEECCCEEEEEEE
YTPDTSDDDDSSDVQVGIVCRALVCAATRKPGFGSEPQVTPDGKVVYLGQDEQAVSLWTE
ECCCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEC
GAGFARARWAGHPGFEYGEVSPSRPVLAPDGSLRVVSSRPARGSCTFELLASEPRAADLS
CCCCEEEEECCCCCCCCCCCCCCCCEECCCCCEEEEECCCCCCCEEEEEEECCCCCCCEE
VVARSTRPLRGAAGSDCASYLDTYSADWVAVHPDDHRARDFWFVRRGETWTTTREDPSGL
EEEECCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCEEEEEECCCEEECCCCCCCCC
EIVDTGRGCCDTAVAGFVHWNDVAYGSPDGRRIQVQTHLLGDETWSAPLLFDGAPAGFAC
EEEECCCCHHHHHHHCEEEECCEECCCCCCCEEEEEEEEECCCCCCCCEEECCCCCCEEE
TWLEGREVGDGFVVLMTCHSGEVRDEFRGDAYAVAATPDLAHWESAWATDVSADPVVDDD
EEECCCCCCCCEEEEEEECCCCCHHHHCCCEEEEEECCCHHHHCCHHCCCCCCCCCCCCC
RVVVGDLSWTPDGGFDQG
CEEEEECEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA