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The map label for this gene is 119715516

Identifier: 119715516

GI number: 119715516

Start: 1353339

End: 1354583

Strand: Reverse

Name: 119715516

Synonym: Noca_1280

Alternate gene names: NA

Gene position: 1354583-1353339 (Counterclockwise)

Preceding gene: 119715523

Following gene: 119715515

Centisome position: 27.17

GC content: 71.97

Gene sequence:

>1245_bases
ATGACCGCGATGGCCCAGCCACGACACCAGGTCTCGCGCGCCGCCACCCAGCTCGAGACCACCCTCGACGACGTCCTCGA
CGCCTCCGTGTGGTCGATGGACCCCGCCGAGACCGCCACCACCCTGGTCACCCTCGAACGCGCCGAGGCCCGGCTGGTCG
AGCTCAAGGCCCGGGTCGCCGCGCACGCCGACGACCTCCACGTCGGCGGTGAGATCGGCGCCTCCTGCGCCGCGAACTGG
CTGGCACATGCGACCAGGACCACCCGGTCCGCCGCCCACCACACCGTCCGGCTCGGCCACGCCCTCGAAGAACACCGACC
CACCCGCGAGGCCCTGGCCACCGGACAGATCCTGGCCGACCAAGCCCGAGTGATCCTCCGCGCCCTCGACCAGCTCCCCG
ACACCATCGACGCCCCCACCCGGGCCCGGGCCGAACACCACCTCCTCGACGCCGCCACAGAGCACGACGCCAAGGCCTTG
ACCCGGCTCGGCAAACACCTCTACGAAGTCATCGCCCCCGAGGAGGCCGACGCCCACGAAGCCGCCCTCCTCGAGAAGGA
GGAAGCCGCCGCGGCCCGCGCCTGCCACCTGACCATGGTCGACGACGGACACGGCAAGACCCGCGGGGTCTTCACGATCC
CGACCCTCCACGGCGCCGCGCTGCGCAAGATGCTGCACGCCCTGGCCGCCCCCAAACACCTCGCCGCCACCCAAGGAGCA
GGGACCGAACGCCGACCCACCCCCGAAGCCCTGGGCCAGGCCCTCTGCGAGCTCCTCGAGCGCTACCCCGCCCACCAGCT
CCCCCACACCGGCGGCATCAGCGCCACCATGGTCGTACTCCTCGACCTCGACACCCTCCTCGGCCGGCTGGAGAAAGCCG
GGATCCTCGAGACCGGGGACAAGATCTCCCCCACCCAGGCCCGCCGCCTCGCCTGCGAAGCAGGCATCATCCCCGCCGTC
CTCGACGGCAACTCCCAACCCCTCGACCTCGGCCGCAAGCGCCGCCTGTTCACCGACTACCAGCGGATCGCGCTGCTCGT
CCGCGACCACGGCTGCCGTGCCGACGGCTGCCAGCGCACCACCGGACTCCACGCCCACCACAAGACCCACTGGACCGACG
GCGGCCCCACCAACCTCGCCAACGCCATCACCCTGTGCCCCTGGCACCACGCACGAGCCCACGACGGCTCCTACCGGACC
ACCCACCACCCCAACGGCACCATCACCTACCACCGACGCACGTAG

Upstream 100 bases:

>100_bases
GTCCGCCTCGAAGTTCTTCGAAGCCCCTTGCCCTGCCCTCTTGACAAATCGAACAGGTGTTTGATACTATGCGGCCACGC
AACATTCTCGGGAGCGCCCT

Downstream 100 bases:

>100_bases
ACCGACCGGCCCACCGATGCACGTAGGCTCCGCCCATGTCTCGGGGACACGCATGGGCCGGTGGCGGCCTGGCGGTCACC
GCCGCGACGGCACTCGTCGT

Product: HNH nuclease

Products: NA

Alternate protein names: HNH Nuclease; Hnh Endonuclease; HNH Endonuclease Domain-Containing Protein

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTAMAQPRHQVSRAATQLETTLDDVLDASVWSMDPAETATTLVTLERAEARLVELKARVAAHADDLHVGGEIGASCAANW
LAHATRTTRSAAHHTVRLGHALEEHRPTREALATGQILADQARVILRALDQLPDTIDAPTRARAEHHLLDAATEHDAKAL
TRLGKHLYEVIAPEEADAHEAALLEKEEAAAARACHLTMVDDGHGKTRGVFTIPTLHGAALRKMLHALAAPKHLAATQGA
GTERRPTPEALGQALCELLERYPAHQLPHTGGISATMVVLLDLDTLLGRLEKAGILETGDKISPTQARRLACEAGIIPAV
LDGNSQPLDLGRKRRLFTDYQRIALLVRDHGCRADGCQRTTGLHAHHKTHWTDGGPTNLANAITLCPWHHARAHDGSYRT
THHPNGTITYHRRT

Sequences:

>Translated_414_residues
MTAMAQPRHQVSRAATQLETTLDDVLDASVWSMDPAETATTLVTLERAEARLVELKARVAAHADDLHVGGEIGASCAANW
LAHATRTTRSAAHHTVRLGHALEEHRPTREALATGQILADQARVILRALDQLPDTIDAPTRARAEHHLLDAATEHDAKAL
TRLGKHLYEVIAPEEADAHEAALLEKEEAAAARACHLTMVDDGHGKTRGVFTIPTLHGAALRKMLHALAAPKHLAATQGA
GTERRPTPEALGQALCELLERYPAHQLPHTGGISATMVVLLDLDTLLGRLEKAGILETGDKISPTQARRLACEAGIIPAV
LDGNSQPLDLGRKRRLFTDYQRIALLVRDHGCRADGCQRTTGLHAHHKTHWTDGGPTNLANAITLCPWHHARAHDGSYRT
THHPNGTITYHRRT
>Mature_413_residues
TAMAQPRHQVSRAATQLETTLDDVLDASVWSMDPAETATTLVTLERAEARLVELKARVAAHADDLHVGGEIGASCAANWL
AHATRTTRSAAHHTVRLGHALEEHRPTREALATGQILADQARVILRALDQLPDTIDAPTRARAEHHLLDAATEHDAKALT
RLGKHLYEVIAPEEADAHEAALLEKEEAAAARACHLTMVDDGHGKTRGVFTIPTLHGAALRKMLHALAAPKHLAATQGAG
TERRPTPEALGQALCELLERYPAHQLPHTGGISATMVVLLDLDTLLGRLEKAGILETGDKISPTQARRLACEAGIIPAVL
DGNSQPLDLGRKRRLFTDYQRIALLVRDHGCRADGCQRTTGLHAHHKTHWTDGGPTNLANAITLCPWHHARAHDGSYRTT
HHPNGTITYHRRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44931; Mature: 44800

Theoretical pI: Translated: 7.28; Mature: 7.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAMAQPRHQVSRAATQLETTLDDVLDASVWSMDPAETATTLVTLERAEARLVELKARVA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AHADDLHVGGEIGASCAANWLAHATRTTRSAAHHTVRLGHALEEHRPTREALATGQILAD
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QARVILRALDQLPDTIDAPTRARAEHHLLDAATEHDAKALTRLGKHLYEVIAPEEADAHE
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AALLEKEEAAAARACHLTMVDDGHGKTRGVFTIPTLHGAALRKMLHALAAPKHLAATQGA
HHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHCCCC
GTERRPTPEALGQALCELLERYPAHQLPHTGGISATMVVLLDLDTLLGRLEKAGILETGD
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
KISPTQARRLACEAGIIPAVLDGNSQPLDLGRKRRLFTDYQRIALLVRDHGCRADGCQRT
CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TGLHAHHKTHWTDGGPTNLANAITLCPWHHARAHDGSYRTTHHPNGTITYHRRT
CCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
TAMAQPRHQVSRAATQLETTLDDVLDASVWSMDPAETATTLVTLERAEARLVELKARVA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AHADDLHVGGEIGASCAANWLAHATRTTRSAAHHTVRLGHALEEHRPTREALATGQILAD
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
QARVILRALDQLPDTIDAPTRARAEHHLLDAATEHDAKALTRLGKHLYEVIAPEEADAHE
HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AALLEKEEAAAARACHLTMVDDGHGKTRGVFTIPTLHGAALRKMLHALAAPKHLAATQGA
HHHHHHHHHHHHHHEEEEEEECCCCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHCCCC
GTERRPTPEALGQALCELLERYPAHQLPHTGGISATMVVLLDLDTLLGRLEKAGILETGD
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
KISPTQARRLACEAGIIPAVLDGNSQPLDLGRKRRLFTDYQRIALLVRDHGCRADGCQRT
CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
TGLHAHHKTHWTDGGPTNLANAITLCPWHHARAHDGSYRTTHHPNGTITYHRRT
CCCCCCCCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA