| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715501
Identifier: 119715501
GI number: 119715501
Start: 1339602
End: 1340498
Strand: Direct
Name: 119715501
Synonym: Noca_1265
Alternate gene names: NA
Gene position: 1339602-1340498 (Clockwise)
Preceding gene: 119715500
Following gene: 119715503
Centisome position: 26.87
GC content: 71.35
Gene sequence:
>897_bases ATGCGGCGGGACCACTGGAAGAGGCGCAACGACTCGCTCGACCCGGAGACCGACTTCGTCGAGATCTACCGCAACGTCGT GATGTACGAGTTCCCGTGGGACATGAACCAGGCGCTCAGCTTCGCGCTGTTCCGCACCTACGCCGTGCCCGGCATCGGCC GGCTGCTCGACGACACCGGGGCGTTCACCGAGCAGGTGCAGAAGAGGTACGACGACACCGCGCTGCTGCTCGAGCCGCCG ACCCGGCTCGGCTTCGACCACCCGGAGTCGCGGGCCGCGATCCGCCGGATCAACACCATGCACCGCGCCTACGACATCCC GGACCACGAGTTCCGCTACGTGCTCTCGACGTTCGTGGTCGTCCCGAAGCGCTGGCTCGACGACTACGGCAAGCGGTCGC TGACGCCGACCGAGCTCGAGGCGTCGGTGCGCTACTACCGCACGCTCGGGCGGCACATGAACATCCGCGACGTGCCGGAG ACCTACGCCGGGTTCGAGGAGCTGATGGACTCCTACGAGGCCGAGCACTTCGGGTACGACGAGGGCGCCCGCCGGGTCGC CGACGCCACGCTGGCGCTGATGCAGACGTTCTACGCCCCGCCGGTGCGCCGGCCGGCCGGGCTGTTCGCCAAGGCGCTGA TGGACCAGCCGCTGCGCGAGGCGTTCCGGTACGACGCGCCCGCGGCGGCCGTCCAGCGGGCCAGCCGGGCCGCGCTGCGG GCCCGTGGCCTGGCCCTGCGGGCCTTCCCGGCCCGCCGCTCGCCGAAGCGGATCGAGGACATCTCCTGGATCCGCAGCTA CCCCGACGGCTACCGGATCGAGGAGCTCGGCACCTTCCCGGTGCCCGGCGTCGCCGGCTGCCCGGTCCGCCACGATCGGG AGGCGTCTACCGGCTGA
Upstream 100 bases:
>100_bases ACTTCATCGAGGCCGGCATCCGCTGGCGCCGCGGCGCGGAGAAGGCCGCCGCCAACTGACGACTCGGCCAACTGGCCAGA ACGTGTTCTAAGGTCGGTCC
Downstream 100 bases:
>100_bases GCCCGCGCGGCCGCGACGACGAGGAGTCAGGCGGCCGCCGCCTGCAGGACCGTCGCGCACCAGCCGCTGGCGCGGTCCAG CGCCTCGCCCGGCGGTCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRRDHWKRRNDSLDPETDFVEIYRNVVMYEFPWDMNQALSFALFRTYAVPGIGRLLDDTGAFTEQVQKRYDDTALLLEPP TRLGFDHPESRAAIRRINTMHRAYDIPDHEFRYVLSTFVVVPKRWLDDYGKRSLTPTELEASVRYYRTLGRHMNIRDVPE TYAGFEELMDSYEAEHFGYDEGARRVADATLALMQTFYAPPVRRPAGLFAKALMDQPLREAFRYDAPAAAVQRASRAALR ARGLALRAFPARRSPKRIEDISWIRSYPDGYRIEELGTFPVPGVAGCPVRHDREASTG
Sequences:
>Translated_298_residues MRRDHWKRRNDSLDPETDFVEIYRNVVMYEFPWDMNQALSFALFRTYAVPGIGRLLDDTGAFTEQVQKRYDDTALLLEPP TRLGFDHPESRAAIRRINTMHRAYDIPDHEFRYVLSTFVVVPKRWLDDYGKRSLTPTELEASVRYYRTLGRHMNIRDVPE TYAGFEELMDSYEAEHFGYDEGARRVADATLALMQTFYAPPVRRPAGLFAKALMDQPLREAFRYDAPAAAVQRASRAALR ARGLALRAFPARRSPKRIEDISWIRSYPDGYRIEELGTFPVPGVAGCPVRHDREASTG >Mature_298_residues MRRDHWKRRNDSLDPETDFVEIYRNVVMYEFPWDMNQALSFALFRTYAVPGIGRLLDDTGAFTEQVQKRYDDTALLLEPP TRLGFDHPESRAAIRRINTMHRAYDIPDHEFRYVLSTFVVVPKRWLDDYGKRSLTPTELEASVRYYRTLGRHMNIRDVPE TYAGFEELMDSYEAEHFGYDEGARRVADATLALMQTFYAPPVRRPAGLFAKALMDQPLREAFRYDAPAAAVQRASRAALR ARGLALRAFPARRSPKRIEDISWIRSYPDGYRIEELGTFPVPGVAGCPVRHDREASTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34460; Mature: 34460
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDHWKRRNDSLDPETDFVEIYRNVVMYEFPWDMNQALSFALFRTYAVPGIGRLLDDTG CCCCHHHHCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHH AFTEQVQKRYDDTALLLEPPTRLGFDHPESRAAIRRINTMHRAYDIPDHEFRYVLSTFVV HHHHHHHHHCCCCEEEECCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VPKRWLDDYGKRSLTPTELEASVRYYRTLGRHMNIRDVPETYAGFEELMDSYEAEHFGYD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC EGARRVADATLALMQTFYAPPVRRPAGLFAKALMDQPLREAFRYDAPAAAVQRASRAALR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ARGLALRAFPARRSPKRIEDISWIRSYPDGYRIEELGTFPVPGVAGCPVRHDREASTG HHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRDHWKRRNDSLDPETDFVEIYRNVVMYEFPWDMNQALSFALFRTYAVPGIGRLLDDTG CCCCHHHHCCCCCCCCHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHH AFTEQVQKRYDDTALLLEPPTRLGFDHPESRAAIRRINTMHRAYDIPDHEFRYVLSTFVV HHHHHHHHHCCCCEEEECCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH VPKRWLDDYGKRSLTPTELEASVRYYRTLGRHMNIRDVPETYAGFEELMDSYEAEHFGYD HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC EGARRVADATLALMQTFYAPPVRRPAGLFAKALMDQPLREAFRYDAPAAAVQRASRAALR HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH ARGLALRAFPARRSPKRIEDISWIRSYPDGYRIEELGTFPVPGVAGCPVRHDREASTG HHCCCEEECCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA