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The map label for this gene is ams [H]

Identifier: 119715503

GI number: 119715503

Start: 1341192

End: 1343129

Strand: Direct

Name: ams [H]

Synonym: Noca_1267

Alternate gene names: 119715503

Gene position: 1341192-1343129 (Clockwise)

Preceding gene: 119715501

Following gene: 119715504

Centisome position: 26.9

GC content: 74.51

Gene sequence:

>1938_bases
ATGCGGGGGATGAGCGCTCCCGCCGACGTCCAGGCCGCAGCCGCCGCCCTCCTGGGCGGGCTGGGCGCCGAGCGCCGCGA
GTCCTTCGCGCTGCGACTGGACCGCTGGTGGCCGGACCTGCGCGCCGCCGTCGTCGAGCTGTACGACGACCCCGATGCGG
TGGCCCGTCGTCTCGTAGCGGTCGCCGCCGCGGGCCACGCGGCCCGCTCGGAGGACCTGCACCGGCTCGACGAGCGCCGG
CTGCTGGAGCCGGACTGGCTGCAGCACCCGCGGATGTTCGGCTACGCCTGCTACACCGAGCGCTTCGGGGGTGACCTGGC
CGGGCTGCGCGACCGGCTCGACCACCTCGAGGACCTCGGCGTCACCTACCTGCACCTGATGCCGCTGCTGCAGCCCCGGG
AGGGCGACAACGACGGCGGCTACGCCGTCGCCGACTACCGCACGGTCCGCCCGGACCTCGGCACCACCGCCGACCTCGCC
GACCTCGCGGGGGTCCTCCGCGCCCGCGGGATCAGCCTCGTGGTCGACCTGGTGCTCAACCACGTCGCGCGCGAGCACGA
ATGGGCGGAGCGCGCTCGGGCCGGGGAGCCGGCGTACCTCGCGTACTTCCACCACTACCCCGACCGCGAGCTGCCCGACG
CCTACGAGGCGACCCTGCCCGAGGTGTTCCCGGACTTCGCGCCCGGCAACTTCAGCTGGGACGACGACCTGGGCGCCTGG
GTGTGGACGACGTTCAACGCGTGGCAGTGGGACCTCGACTGGGCCAACCCCGCGGTGCTCGAGGAGTTCGCCGACATCGT
CGTGACGCTCGCCAACCTGGGCGTCGAGGTGCTCCGCCTCGATGCCATCGCGTTCCTGTGGAAGCGGCTCGGCAGCACCT
GCCAGAACGAGCCGGAGGTGCACGCGATCACCCAGGCGCTGCGCGCCGTCGCGCGGCTCGCGGCGCCGGCGGTGGCGTTC
AAGGCCGAGGCGATCGTCGGCCCCCGCGACCTCGTGCAGTACCTCGGCCTCGGCGCGCACGCCGGGCGGGTCAGCGACCT
GGCCTACCACAACAGCCTGATGGTGCAGGTCTGGTCGATGCTCGCCACGCAGAGCACGACGCTGGCCCGGCACGCGCTGG
CCGCGCTGCCGTCGGCGCCCGCCACCTCGACCTGGATCACCTATGCCCGTTGCCACGACGACATCGGCTGGGCCATCGAC
GACGGCGACGCGGCGGCCGTCGGCCTCGACGGCCCGGCGCACCGGCGCTTCCTCGCCGACTGGTACGCCGGTGACTTCCC
GGGCTCCTGGGCCGACGGGCTGGTCTTCCAGCACAACCCGGAGACCGGCGACAAGCGGATCAGCGGTACGGCGGCCTCGC
TGGCCGGGCTGTCCGAGGACACCGACGCCGGGCTCGCGCGGATCTTCCTCGCCCACGCGATCGTCGCCGGCTGGGGCGGG
ATCCCCGTGGTGTGGAGCGGCGACGAGCTCGGCCAGCCCAACGACCCGGACTGGGCGACCGAGCCCGGCCACGAGGACGA
CAACCGATGGGCGCACCGGCCCCGGCTGGACGGCCGGCTCGCCGCACAGCGCCACGACCTGCGCACGGTCCCGGGCCGGG
TCTTCAGCGGGCTCGCCCACCTGTCCCGGGTCCGGGCCGGCCTGCCGCAGCTGCACGCCTCCGCGGCCAGCGAGGTCCTC
CTCGACACCGACGAGGGCGTGCTCGCGTGCGCGCGGCGGCACCCGAGCGGCGCGATGGTGACCCTCTACAACGTCACGAC
CACGCCGCGGCCGTTCCCGATCCACCGGCTGGCGGAGTGCGGCATCGGTGCGCCGTACGACGCGCTCGGCGGGCACCCGA
TCACCGCGGGCGCGGACGGCCAGGCCTGGCTGCCGCCGTACGCCGCCTGGTGGGTGGTCGACAGCACAGGTCCCCAGACA
CGTCCCCGGAAGCATTAG

Upstream 100 bases:

>100_bases
CGCCAGCAGACCGGCCAGCAGGCCCGTGAGCAGCCCCGTGAGCGGGGCCACGGATGGAGCACGCGGAAGGGGCACGAGGA
CAACCTACGGGGGTGCTTGA

Downstream 100 bases:

>100_bases
GCCCAGGGTCTACGCTCGACTCCCGTGATCCGGTTCGAGAAGGTGGTCAAGACCTACCCCGGCCAGGCGAGCCCTGCGCT
CGACCAGGTCTCGGTCGACG

Product: alpha amylase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 645; Mature: 645

Protein sequence:

>645_residues
MRGMSAPADVQAAAAALLGGLGAERRESFALRLDRWWPDLRAAVVELYDDPDAVARRLVAVAAAGHAARSEDLHRLDERR
LLEPDWLQHPRMFGYACYTERFGGDLAGLRDRLDHLEDLGVTYLHLMPLLQPREGDNDGGYAVADYRTVRPDLGTTADLA
DLAGVLRARGISLVVDLVLNHVAREHEWAERARAGEPAYLAYFHHYPDRELPDAYEATLPEVFPDFAPGNFSWDDDLGAW
VWTTFNAWQWDLDWANPAVLEEFADIVVTLANLGVEVLRLDAIAFLWKRLGSTCQNEPEVHAITQALRAVARLAAPAVAF
KAEAIVGPRDLVQYLGLGAHAGRVSDLAYHNSLMVQVWSMLATQSTTLARHALAALPSAPATSTWITYARCHDDIGWAID
DGDAAAVGLDGPAHRRFLADWYAGDFPGSWADGLVFQHNPETGDKRISGTAASLAGLSEDTDAGLARIFLAHAIVAGWGG
IPVVWSGDELGQPNDPDWATEPGHEDDNRWAHRPRLDGRLAAQRHDLRTVPGRVFSGLAHLSRVRAGLPQLHASAASEVL
LDTDEGVLACARRHPSGAMVTLYNVTTTPRPFPIHRLAECGIGAPYDALGGHPITAGADGQAWLPPYAAWWVVDSTGPQT
RPRKH

Sequences:

>Translated_645_residues
MRGMSAPADVQAAAAALLGGLGAERRESFALRLDRWWPDLRAAVVELYDDPDAVARRLVAVAAAGHAARSEDLHRLDERR
LLEPDWLQHPRMFGYACYTERFGGDLAGLRDRLDHLEDLGVTYLHLMPLLQPREGDNDGGYAVADYRTVRPDLGTTADLA
DLAGVLRARGISLVVDLVLNHVAREHEWAERARAGEPAYLAYFHHYPDRELPDAYEATLPEVFPDFAPGNFSWDDDLGAW
VWTTFNAWQWDLDWANPAVLEEFADIVVTLANLGVEVLRLDAIAFLWKRLGSTCQNEPEVHAITQALRAVARLAAPAVAF
KAEAIVGPRDLVQYLGLGAHAGRVSDLAYHNSLMVQVWSMLATQSTTLARHALAALPSAPATSTWITYARCHDDIGWAID
DGDAAAVGLDGPAHRRFLADWYAGDFPGSWADGLVFQHNPETGDKRISGTAASLAGLSEDTDAGLARIFLAHAIVAGWGG
IPVVWSGDELGQPNDPDWATEPGHEDDNRWAHRPRLDGRLAAQRHDLRTVPGRVFSGLAHLSRVRAGLPQLHASAASEVL
LDTDEGVLACARRHPSGAMVTLYNVTTTPRPFPIHRLAECGIGAPYDALGGHPITAGADGQAWLPPYAAWWVVDSTGPQT
RPRKH
>Mature_645_residues
MRGMSAPADVQAAAAALLGGLGAERRESFALRLDRWWPDLRAAVVELYDDPDAVARRLVAVAAAGHAARSEDLHRLDERR
LLEPDWLQHPRMFGYACYTERFGGDLAGLRDRLDHLEDLGVTYLHLMPLLQPREGDNDGGYAVADYRTVRPDLGTTADLA
DLAGVLRARGISLVVDLVLNHVAREHEWAERARAGEPAYLAYFHHYPDRELPDAYEATLPEVFPDFAPGNFSWDDDLGAW
VWTTFNAWQWDLDWANPAVLEEFADIVVTLANLGVEVLRLDAIAFLWKRLGSTCQNEPEVHAITQALRAVARLAAPAVAF
KAEAIVGPRDLVQYLGLGAHAGRVSDLAYHNSLMVQVWSMLATQSTTLARHALAALPSAPATSTWITYARCHDDIGWAID
DGDAAAVGLDGPAHRRFLADWYAGDFPGSWADGLVFQHNPETGDKRISGTAASLAGLSEDTDAGLARIFLAHAIVAGWGG
IPVVWSGDELGQPNDPDWATEPGHEDDNRWAHRPRLDGRLAAQRHDLRTVPGRVFSGLAHLSRVRAGLPQLHASAASEVL
LDTDEGVLACARRHPSGAMVTLYNVTTTPRPFPIHRLAECGIGAPYDALGGHPITAGADGQAWLPPYAAWWVVDSTGPQT
RPRKH

Specific function: Catalyzes the synthesis of alpha-glucan from sucrose. Catalyzes, in addition, sucrose hydrolysis, maltose and maltotriose synthesis by successive transfers of the glucosyl moiety of sucrose onto the released glucose, and finally turanose and trehalulose s

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI187423904, Length=211, Percent_Identity=28.9099526066351, Blast_Score=83, Evalue=6e-16,
Organism=Escherichia coli, GI87081873, Length=527, Percent_Identity=24.6679316888046, Blast_Score=122, Evalue=5e-29,
Organism=Escherichia coli, GI1790687, Length=217, Percent_Identity=31.3364055299539, Blast_Score=90, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6322245, Length=168, Percent_Identity=30.3571428571429, Blast_Score=78, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6321731, Length=227, Percent_Identity=26.431718061674, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6319776, Length=227, Percent_Identity=26.431718061674, Blast_Score=77, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6321726, Length=265, Percent_Identity=24.1509433962264, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322241, Length=265, Percent_Identity=22.6415094339623, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6322021, Length=265, Percent_Identity=22.6415094339623, Blast_Score=70, Evalue=8e-13,
Organism=Saccharomyces cerevisiae, GI6324416, Length=265, Percent_Identity=22.6415094339623, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24583747, Length=226, Percent_Identity=28.7610619469027, Blast_Score=95, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24583749, Length=226, Percent_Identity=28.7610619469027, Blast_Score=95, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24583745, Length=238, Percent_Identity=25.6302521008403, Blast_Score=92, Evalue=8e-19,
Organism=Drosophila melanogaster, GI24586591, Length=267, Percent_Identity=24.7191011235955, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45549022, Length=193, Percent_Identity=25.9067357512953, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI221330053, Length=246, Percent_Identity=26.8292682926829, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24586587, Length=213, Percent_Identity=26.2910798122066, Blast_Score=80, Evalue=6e-15,
Organism=Drosophila melanogaster, GI24586589, Length=315, Percent_Identity=24.1269841269841, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24586599, Length=212, Percent_Identity=26.8867924528302, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24586593, Length=185, Percent_Identity=27.027027027027, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24586597, Length=212, Percent_Identity=25.9433962264151, Blast_Score=73, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =2.4.1.4 [H]

Molecular weight: Translated: 70392; Mature: 70392

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGMSAPADVQAAAAALLGGLGAERRESFALRLDRWWPDLRAAVVELYDDPDAVARRLVA
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH
VAAAGHAARSEDLHRLDERRLLEPDWLQHPRMFGYACYTERFGGDLAGLRDRLDHLEDLG
HHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
VTYLHLMPLLQPREGDNDGGYAVADYRTVRPDLGTTADLADLAGVLRARGISLVVDLVLN
HHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
HVAREHEWAERARAGEPAYLAYFHHYPDRELPDAYEATLPEVFPDFAPGNFSWDDDLGAW
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCE
VWTTFNAWQWDLDWANPAVLEEFADIVVTLANLGVEVLRLDAIAFLWKRLGSTCQNEPEV
EEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHH
HAITQALRAVARLAAPAVAFKAEAIVGPRDLVQYLGLGAHAGRVSDLAYHNSLMVQVWSM
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LATQSTTLARHALAALPSAPATSTWITYARCHDDIGWAIDDGDAAAVGLDGPAHRRFLAD
HHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCEEEECCCEEEEECCCHHHHHHHHH
WYAGDFPGSWADGLVFQHNPETGDKRISGTAASLAGLSEDTDAGLARIFLAHAIVAGWGG
HHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
IPVVWSGDELGQPNDPDWATEPGHEDDNRWAHRPRLDGRLAAQRHDLRTVPGRVFSGLAH
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH
LSRVRAGLPQLHASAASEVLLDTDEGVLACARRHPSGAMVTLYNVTTTPRPFPIHRLAEC
HHHHHHCCHHHHHHHHHHEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHC
GIGAPYDALGGHPITAGADGQAWLPPYAAWWVVDSTGPQTRPRKH
CCCCCHHHCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MRGMSAPADVQAAAAALLGGLGAERRESFALRLDRWWPDLRAAVVELYDDPDAVARRLVA
CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHH
VAAAGHAARSEDLHRLDERRLLEPDWLQHPRMFGYACYTERFGGDLAGLRDRLDHLEDLG
HHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
VTYLHLMPLLQPREGDNDGGYAVADYRTVRPDLGTTADLADLAGVLRARGISLVVDLVLN
HHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
HVAREHEWAERARAGEPAYLAYFHHYPDRELPDAYEATLPEVFPDFAPGNFSWDDDLGAW
HHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCE
VWTTFNAWQWDLDWANPAVLEEFADIVVTLANLGVEVLRLDAIAFLWKRLGSTCQNEPEV
EEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHH
HAITQALRAVARLAAPAVAFKAEAIVGPRDLVQYLGLGAHAGRVSDLAYHNSLMVQVWSM
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LATQSTTLARHALAALPSAPATSTWITYARCHDDIGWAIDDGDAAAVGLDGPAHRRFLAD
HHHHHHHHHHHHHHHCCCCCCCHHHEEEEEECCCCCEEEECCCEEEEECCCHHHHHHHHH
WYAGDFPGSWADGLVFQHNPETGDKRISGTAASLAGLSEDTDAGLARIFLAHAIVAGWGG
HHCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC
IPVVWSGDELGQPNDPDWATEPGHEDDNRWAHRPRLDGRLAAQRHDLRTVPGRVFSGLAH
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHH
LSRVRAGLPQLHASAASEVLLDTDEGVLACARRHPSGAMVTLYNVTTTPRPFPIHRLAEC
HHHHHHCCHHHHHHHHHHEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHC
GIGAPYDALGGHPITAGADGQAWLPPYAAWWVVDSTGPQTRPRKH
CCCCCHHHCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12517860 [H]