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The map label for this gene is 119715489

Identifier: 119715489

GI number: 119715489

Start: 1329030

End: 1329884

Strand: Direct

Name: 119715489

Synonym: Noca_1253

Alternate gene names: NA

Gene position: 1329030-1329884 (Clockwise)

Preceding gene: 119715488

Following gene: 119715490

Centisome position: 26.66

GC content: 73.68

Gene sequence:

>855_bases
ATGGGCGCGCTCGTCGGACTGGGGGTGGGCGTCGGGCTGATGCTGGTCTGGAGCGCGTTCGCCCTGCCCCGCGGGACCCG
CGCGACGTCCTCGCGCCGCGGTCGGGCCGCCGGGCTGTTGGCGCGGGCGGGCCTCGGGCAGGTCTCGGTCACCGGTTTCG
TCGTGCTCTGCGTCGGGTGCGGTGTCGTCACGACAGTCGTGCTCCAAGCGGTCTCCGGCACCCCGCCGGTCGCGCTCGCG
TTCGGACTGATGGGTGCCTGGGCGCCGGTCGGGATCGTCTCCGGCCGGGCCCGGCGACGTCAGCGTGAGCTCGCCGAGGT
GTGGCCCGAAGCCGTGGACAACCTGACCTCAGCGGTGCGCGCAGGCATGTCACTGCCCGACGCCCTGGCCGGGCTCGGCT
CCCGCGGCCCGGAGCCGTTGCGCGACGCGTTCGACCAGTTCGCGCTCGACTACCAGGTCACCGGGCGGTTCGGCGAGTGC
CTGGACCGGCTCAAGGAGCGGCTGGCCGACCCGGTCGGTGACCGGGTGGTGGAGGGTCTGCGGATCGCTCGTGAGGTCGG
TGGCGGCGAGCTCGGCCGGCTGCTGCGCAACCTCTCGTCGTACCTGCGCGACGACGCCCGCACCCGCTCGGAGCTCGAGG
CACGGCAGGCCTGGACCGTGAACGGCGCCCGCCTGGCCGTGGCGTCCCCGTGGCTGGTGCTGCTCTTCATGTCCTTCCAG
TCCGAGGTGATCCACCGGTACGCCTCGCCGGGAGGCGTCCTGGTGCTCGCCGTCGGTGCGGGCGCCTGTGTGGTCGCGTA
CCGCCTGATGATGCGCATCGGGCGGCTCCCCACCGAGCGGCGGATCCTGTCATGA

Upstream 100 bases:

>100_bases
ACGGCGGCGACCTGCGCCGCACCGGCGGGATGCCACCACACCCCGAGCGCTACGAGCGGTTGGGCATCGACGTCCGCCGG
GTGCTGGCCGAGGGGGCGTG

Downstream 100 bases:

>100_bases
CACCCGCGGTGTGGGGTGCGCTGCTGGGCGCCGTGGCGGGCTCGGGGCTGCTGCTCGTGGCGGCACGGGTGCGGGTGATC
CGCCGGCCCCAGCTCGCCGT

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Type II Secretion System Protein F; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; Bacterial Type II Secretion System Protein F Domain Protein; Type II Secretion System F Domain

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MGALVGLGVGVGLMLVWSAFALPRGTRATSSRRGRAAGLLARAGLGQVSVTGFVVLCVGCGVVTTVVLQAVSGTPPVALA
FGLMGAWAPVGIVSGRARRRQRELAEVWPEAVDNLTSAVRAGMSLPDALAGLGSRGPEPLRDAFDQFALDYQVTGRFGEC
LDRLKERLADPVGDRVVEGLRIAREVGGGELGRLLRNLSSYLRDDARTRSELEARQAWTVNGARLAVASPWLVLLFMSFQ
SEVIHRYASPGGVLVLAVGAGACVVAYRLMMRIGRLPTERRILS

Sequences:

>Translated_284_residues
MGALVGLGVGVGLMLVWSAFALPRGTRATSSRRGRAAGLLARAGLGQVSVTGFVVLCVGCGVVTTVVLQAVSGTPPVALA
FGLMGAWAPVGIVSGRARRRQRELAEVWPEAVDNLTSAVRAGMSLPDALAGLGSRGPEPLRDAFDQFALDYQVTGRFGEC
LDRLKERLADPVGDRVVEGLRIAREVGGGELGRLLRNLSSYLRDDARTRSELEARQAWTVNGARLAVASPWLVLLFMSFQ
SEVIHRYASPGGVLVLAVGAGACVVAYRLMMRIGRLPTERRILS
>Mature_283_residues
GALVGLGVGVGLMLVWSAFALPRGTRATSSRRGRAAGLLARAGLGQVSVTGFVVLCVGCGVVTTVVLQAVSGTPPVALAF
GLMGAWAPVGIVSGRARRRQRELAEVWPEAVDNLTSAVRAGMSLPDALAGLGSRGPEPLRDAFDQFALDYQVTGRFGECL
DRLKERLADPVGDRVVEGLRIAREVGGGELGRLLRNLSSYLRDDARTRSELEARQAWTVNGARLAVASPWLVLLFMSFQS
EVIHRYASPGGVLVLAVGAGACVVAYRLMMRIGRLPTERRILS

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30135; Mature: 30003

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure 
GALVGLGVGVGLMLVWSAFALPRGTRATSSRRGRAAGLLARAGLGQVSVTGFVVLCVGC
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH
GVVTTVVLQAVSGTPPVALAFGLMGAWAPVGIVSGRARRRQRELAEVWPEAVDNLTSAVR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGMSLPDALAGLGSRGPEPLRDAFDQFALDYQVTGRFGECLDRLKERLADPVGDRVVEGL
HCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHH
RIAREVGGGELGRLLRNLSSYLRDDARTRSELEARQAWTVNGARLAVASPWLVLLFMSFQ
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHH
SEVIHRYASPGGVLVLAVGAGACVVAYRLMMRIGRLPTERRILS
HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA