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The map label for this gene is 119715488

Identifier: 119715488

GI number: 119715488

Start: 1327723

End: 1329030

Strand: Direct

Name: 119715488

Synonym: Noca_1252

Alternate gene names: NA

Gene position: 1327723-1329030 (Clockwise)

Preceding gene: 119715486

Following gene: 119715489

Centisome position: 26.63

GC content: 72.71

Gene sequence:

>1308_bases
ATGTCACTGACCCACCCACCGGCGCACCCGGCGACGCACCCGGCGACGCACCCGGCGGCCCGACGTACGGCGAGCGCGCA
CGAGGAGCTGGTCGAGCAGCTCGACCTGCACGTCCGGGAGCTGGTGCGGCGCGAGGCCGTGGACCCGCAGCGCGAGGCCG
ACCTGGTCCGACGGATCGCCGAGTCGGTGGTGCGCGAGCACGACGAGCGCAGCCTCACCGGCGCGGTCGCGCCGGTGTCC
GACGTCGACTCGATGGTCGGCGAGCTGGTCGCCCGGGTCTCCGGCTTCGGGCCGCTCCAGCCGCTCCTCGACGACCCCAC
GGTCGAGGAGGTCTGGATCAACGACCCGAGCCGGGTCTTCGTGGCCCGCAACGGCCGTCACGAGCTGACCACGTTGGTGC
TCACCTCCGCGCAGGTGCAGGAGCTCGTGGAGCGAATGCTGAAGACCAGCGGCCGACGCATCGACATCAGCCAGCCGTTC
GTGGACGCGATGCTGCCGGAGGGGCACCGCCTGCACGTGGTGCTGGAGGGGATCAGCCGAGGCTTCTCCGCCGTCAACAT
CCGCAAGTTCGTGCTGCGCGCCGCCCGGTTGCGCGACCTGGTCGAGCTCGGCAGCCTGACGCCCGCCGGCGCCGGCTTCC
TCGAGTCCTCGGTCCGCGCCGGGCTGAACGTGCTGGTCGCCGGCGGCACCCAGGCCGGCAAGACCACGATGCTCAACTGC
CTGGCGGCCGCGATCCCCGGCGGCGACCGGGTGGTCTCGGCGGAGGAGGTCTTCGAGCTGCGCTTCCCGCACCCCGACTG
GGTGCCGCTGCAGACTCGGCAGTCCGGGCTCGAGGGCACCGGCGAGATCCGGCTGCGCGACCTGGTCAAGGAGAGCCTGC
GGATGCGGCCGAGCCGGATCATCGTCGGCGAGGTCCGGGCCGAGGAGTGCCTGGACCTGCTGCTCGCCCTCAACGCCGGC
CTCCCGGGGATGTGCACGATCCATGCCAACAGCGCCCGGGAGGCGCTGGTGAAGATGTGCACCCTGCCGCTGCTCGCCGG
CGAGAACATCTCGGCGCGGTTCGTGGTCCCGACGGTGGCGGCGAGCGTCGACCTGGTCGTGCACCTCGGCGTCGACGAGC
ACGGCGTCCGCCGGGTCAACGAGATCGTCGGCGTGCCGGGCCGGGTCGAGAACGACGTGATCGAGGTCGAGCCGCTCTTC
GAACGCCACGGCGGCGACCTGCGCCGCACCGGCGGGATGCCACCACACCCCGAGCGCTACGAGCGGTTGGGCATCGACGT
CCGCCGGGTGCTGGCCGAGGGGGCGTGA

Upstream 100 bases:

>100_bases
GCCCCGGCCCGATCGTTGTCCACAGGCAGCGACGCCGGTGGGTTTGGCGGGGGCCTCGATCAGGAAGACTCACCGCCAAG
GAACCATCTCGGGGGACTCG

Downstream 100 bases:

>100_bases
TGGGCGCGCTCGTCGGACTGGGGGTGGGCGTCGGGCTGATGCTGGTCTGGAGCGCGTTCGCCCTGCCCCGCGGGACCCGC
GCGACGTCCTCGCGCCGCGG

Product: type II secretion system protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MSLTHPPAHPATHPATHPAARRTASAHEELVEQLDLHVRELVRREAVDPQREADLVRRIAESVVREHDERSLTGAVAPVS
DVDSMVGELVARVSGFGPLQPLLDDPTVEEVWINDPSRVFVARNGRHELTTLVLTSAQVQELVERMLKTSGRRIDISQPF
VDAMLPEGHRLHVVLEGISRGFSAVNIRKFVLRAARLRDLVELGSLTPAGAGFLESSVRAGLNVLVAGGTQAGKTTMLNC
LAAAIPGGDRVVSAEEVFELRFPHPDWVPLQTRQSGLEGTGEIRLRDLVKESLRMRPSRIIVGEVRAEECLDLLLALNAG
LPGMCTIHANSAREALVKMCTLPLLAGENISARFVVPTVAASVDLVVHLGVDEHGVRRVNEIVGVPGRVENDVIEVEPLF
ERHGGDLRRTGGMPPHPERYERLGIDVRRVLAEGA

Sequences:

>Translated_435_residues
MSLTHPPAHPATHPATHPAARRTASAHEELVEQLDLHVRELVRREAVDPQREADLVRRIAESVVREHDERSLTGAVAPVS
DVDSMVGELVARVSGFGPLQPLLDDPTVEEVWINDPSRVFVARNGRHELTTLVLTSAQVQELVERMLKTSGRRIDISQPF
VDAMLPEGHRLHVVLEGISRGFSAVNIRKFVLRAARLRDLVELGSLTPAGAGFLESSVRAGLNVLVAGGTQAGKTTMLNC
LAAAIPGGDRVVSAEEVFELRFPHPDWVPLQTRQSGLEGTGEIRLRDLVKESLRMRPSRIIVGEVRAEECLDLLLALNAG
LPGMCTIHANSAREALVKMCTLPLLAGENISARFVVPTVAASVDLVVHLGVDEHGVRRVNEIVGVPGRVENDVIEVEPLF
ERHGGDLRRTGGMPPHPERYERLGIDVRRVLAEGA
>Mature_434_residues
SLTHPPAHPATHPATHPAARRTASAHEELVEQLDLHVRELVRREAVDPQREADLVRRIAESVVREHDERSLTGAVAPVSD
VDSMVGELVARVSGFGPLQPLLDDPTVEEVWINDPSRVFVARNGRHELTTLVLTSAQVQELVERMLKTSGRRIDISQPFV
DAMLPEGHRLHVVLEGISRGFSAVNIRKFVLRAARLRDLVELGSLTPAGAGFLESSVRAGLNVLVAGGTQAGKTTMLNCL
AAAIPGGDRVVSAEEVFELRFPHPDWVPLQTRQSGLEGTGEIRLRDLVKESLRMRPSRIIVGEVRAEECLDLLLALNAGL
PGMCTIHANSAREALVKMCTLPLLAGENISARFVVPTVAASVDLVVHLGVDEHGVRRVNEIVGVPGRVENDVIEVEPLFE
RHGGDLRRTGGMPPHPERYERLGIDVRRVLAEGA

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022399
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 47439; Mature: 47308

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTHPPAHPATHPATHPAARRTASAHEELVEQLDLHVRELVRREAVDPQREADLVRRIA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ESVVREHDERSLTGAVAPVSDVDSMVGELVARVSGFGPLQPLLDDPTVEEVWINDPSRVF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEECCCCCEEE
VARNGRHELTTLVLTSAQVQELVERMLKTSGRRIDISQPFVDAMLPEGHRLHVVLEGISR
EEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCEEEEEEEHHHC
GFSAVNIRKFVLRAARLRDLVELGSLTPAGAGFLESSVRAGLNVLVAGGTQAGKTTMLNC
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHH
LAAAIPGGDRVVSAEEVFELRFPHPDWVPLQTRQSGLEGTGEIRLRDLVKESLRMRPSRI
HHHHCCCCCCEECHHHHHEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCEE
IVGEVRAEECLDLLLALNAGLPGMCTIHANSAREALVKMCTLPLLAGENISARFVVPTVA
EEECCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
ASVDLVVHLGVDEHGVRRVNEIVGVPGRVENDVIEVEPLFERHGGDLRRTGGMPPHPERY
CCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECHHHHHCCCCHHHCCCCCCCHHHH
ERLGIDVRRVLAEGA
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLTHPPAHPATHPATHPAARRTASAHEELVEQLDLHVRELVRREAVDPQREADLVRRIA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ESVVREHDERSLTGAVAPVSDVDSMVGELVARVSGFGPLQPLLDDPTVEEVWINDPSRVF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCEEECCCCCEEE
VARNGRHELTTLVLTSAQVQELVERMLKTSGRRIDISQPFVDAMLPEGHRLHVVLEGISR
EEECCCCEEHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCEEEEEEEHHHC
GFSAVNIRKFVLRAARLRDLVELGSLTPAGAGFLESSVRAGLNVLVAGGTQAGKTTMLNC
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHHH
LAAAIPGGDRVVSAEEVFELRFPHPDWVPLQTRQSGLEGTGEIRLRDLVKESLRMRPSRI
HHHHCCCCCCEECHHHHHEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCEE
IVGEVRAEECLDLLLALNAGLPGMCTIHANSAREALVKMCTLPLLAGENISARFVVPTVA
EEECCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
ASVDLVVHLGVDEHGVRRVNEIVGVPGRVENDVIEVEPLFERHGGDLRRTGGMPPHPERY
CCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCEEEECHHHHHCCCCHHHCCCCCCCHHHH
ERLGIDVRRVLAEGA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12218036; 9634230 [H]