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The map label for this gene is 119715490

Identifier: 119715490

GI number: 119715490

Start: 1329881

End: 1330819

Strand: Direct

Name: 119715490

Synonym: Noca_1254

Alternate gene names: NA

Gene position: 1329881-1330819 (Clockwise)

Preceding gene: 119715489

Following gene: 119715491

Centisome position: 26.67

GC content: 75.51

Gene sequence:

>939_bases
ATGACACCCGCGGTGTGGGGTGCGCTGCTGGGCGCCGTGGCGGGCTCGGGGCTGCTGCTCGTGGCGGCACGGGTGCGGGT
GATCCGCCGGCCCCAGCTCGCCGTGCGGGTGCTGCCCTACGTCCGCGACCTCCCCCTGGTCGGCCGGGCGCCGCAGCTGA
GGGTCGCGTCCTCGTCCACCTCCGCGGCTGCCGGCGTGTTCGGGCCGGTGCTGCGCTCGGCCGCCGACGCCGTCGAGCGG
ATCCTCGGCGGCGCGACGTCCGTACGTCGTCGCCTCCAGCGCGCCGGCCTCGACAAGACCGTGCACGAGTTCCGCATCGA
GCAGGTGCTCTGGGGGGTGGTGGGCTTCGCCGTCGCCGCTGCCTGGGGTGTGCTGCGGATGCTCACCCAGCCCGGCGCCG
CGGTGTCCTCCCTGCTGGCCTGCGCGGTGGCGTTCATCGTCGGCGTCCTGGCCCGCGACACCTACCTGACCAGCCAGGTG
CGCGCCCGCGAGCGCCGGATCCTGGCGGAGTTCCCGACCGTGGCCGAGCTGCTCGCGCTCGCGGTCGCCGCCGGCGAGGG
GCCGGTCGCCGCGCTGGACCGCGTCGTACGCCGCAGCGGTGGCGAGCTGTCCGCCGACCTGGCCCGGGTGTTGGCCGAGA
TCCGCACCGGCGAGCCCGTGGCTACGGCCTTCGACGCGATGGCGTCGGCAAGCGGGCTGCCGCTGGTCGCCCGCTTCGCC
CAGGGCATCGCGGTCGCGGTGGAGCGCGGCACGCCCCTCGCCGACGTGTTGCACGCCCAGGCCGCCGACGTCCGCGAGGC
GGGCCGGCGCGAGCTGATCGAGGCCGCCGCCCGCAAGGAGGTCTTCATGATGGTGCCGGTCGTGTTCCTGGTCCTGCCCA
TCACCGTGCTCTTCGCATTCTGGCCCGGCGTCGTCGGGCTGCACCTGACCACTCCCTGA

Upstream 100 bases:

>100_bases
GAGGCGTCCTGGTGCTCGCCGTCGGTGCGGGCGCCTGTGTGGTCGCGTACCGCCTGATGATGCGCATCGGGCGGCTCCCC
ACCGAGCGGCGGATCCTGTC

Downstream 100 bases:

>100_bases
CCAGCCTGCCCTCGACGAGGACCCTTCGGAGAACGGAAGAACCATGGAACACATCTCGCTCGCGATCACCCGGCTCCACC
TGGCGCTCGCCCTGGTGCTC

Product: type II secretion system protein

Products: NA

Alternate protein names: Type II Secretion System F Domain Protein; Flp Pilus Assembly Protein TadB; Flp Pilus Assembly Protein TadC; Pilus Assembly Protein; Type II Secretion System Protein F Domain Protein; Type II Secretion System F Domain-Containing Protein; Type II Secretion System Protein Subunit F; Type II Secretion System Protein F; Type II Secretion System F Domain

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MTPAVWGALLGAVAGSGLLLVAARVRVIRRPQLAVRVLPYVRDLPLVGRAPQLRVASSSTSAAAGVFGPVLRSAADAVER
ILGGATSVRRRLQRAGLDKTVHEFRIEQVLWGVVGFAVAAAWGVLRMLTQPGAAVSSLLACAVAFIVGVLARDTYLTSQV
RARERRILAEFPTVAELLALAVAAGEGPVAALDRVVRRSGGELSADLARVLAEIRTGEPVATAFDAMASASGLPLVARFA
QGIAVAVERGTPLADVLHAQAADVREAGRRELIEAAARKEVFMMVPVVFLVLPITVLFAFWPGVVGLHLTTP

Sequences:

>Translated_312_residues
MTPAVWGALLGAVAGSGLLLVAARVRVIRRPQLAVRVLPYVRDLPLVGRAPQLRVASSSTSAAAGVFGPVLRSAADAVER
ILGGATSVRRRLQRAGLDKTVHEFRIEQVLWGVVGFAVAAAWGVLRMLTQPGAAVSSLLACAVAFIVGVLARDTYLTSQV
RARERRILAEFPTVAELLALAVAAGEGPVAALDRVVRRSGGELSADLARVLAEIRTGEPVATAFDAMASASGLPLVARFA
QGIAVAVERGTPLADVLHAQAADVREAGRRELIEAAARKEVFMMVPVVFLVLPITVLFAFWPGVVGLHLTTP
>Mature_311_residues
TPAVWGALLGAVAGSGLLLVAARVRVIRRPQLAVRVLPYVRDLPLVGRAPQLRVASSSTSAAAGVFGPVLRSAADAVERI
LGGATSVRRRLQRAGLDKTVHEFRIEQVLWGVVGFAVAAAWGVLRMLTQPGAAVSSLLACAVAFIVGVLARDTYLTSQVR
ARERRILAEFPTVAELLALAVAAGEGPVAALDRVVRRSGGELSADLARVLAEIRTGEPVATAFDAMASASGLPLVARFAQ
GIAVAVERGTPLADVLHAQAADVREAGRRELIEAAARKEVFMMVPVVFLVLPITVLFAFWPGVVGLHLTTP

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32747; Mature: 32616

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAVWGALLGAVAGSGLLLVAARVRVIRRPQLAVRVLPYVRDLPLVGRAPQLRVASSST
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEECCCC
SAAAGVFGPVLRSAADAVERILGGATSVRRRLQRAGLDKTVHEFRIEQVLWGVVGFAVAA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AWGVLRMLTQPGAAVSSLLACAVAFIVGVLARDTYLTSQVRARERRILAEFPTVAELLAL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
AVAAGEGPVAALDRVVRRSGGELSADLARVLAEIRTGEPVATAFDAMASASGLPLVARFA
HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH
QGIAVAVERGTPLADVLHAQAADVREAGRRELIEAAARKEVFMMVPVVFLVLPITVLFAF
HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WPGVVGLHLTTP
HHHHHCEEECCC
>Mature Secondary Structure 
TPAVWGALLGAVAGSGLLLVAARVRVIRRPQLAVRVLPYVRDLPLVGRAPQLRVASSST
CHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCEEEECCCC
SAAAGVFGPVLRSAADAVERILGGATSVRRRLQRAGLDKTVHEFRIEQVLWGVVGFAVAA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AWGVLRMLTQPGAAVSSLLACAVAFIVGVLARDTYLTSQVRARERRILAEFPTVAELLAL
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
AVAAGEGPVAALDRVVRRSGGELSADLARVLAEIRTGEPVATAFDAMASASGLPLVARFA
HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH
QGIAVAVERGTPLADVLHAQAADVREAGRRELIEAAARKEVFMMVPVVFLVLPITVLFAF
HHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WPGVVGLHLTTP
HHHHHCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA