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The map label for this gene is accB [C]

Identifier: 119715486

GI number: 119715486

Start: 1325452

End: 1325817

Strand: Direct

Name: accB [C]

Synonym: Noca_1250

Alternate gene names: 119715486

Gene position: 1325452-1325817 (Clockwise)

Preceding gene: 119715485

Following gene: 119715488

Centisome position: 26.58

GC content: 73.77

Gene sequence:

>366_bases
ATGCAGCTCAAGGTGACCGTGAACGGCCAGGTCTACGAGGTCGAGGTCGAGGTCGAGGAGGAGCAGCCGCCCACGCTCGG
CATCTTCATGGCCGGAGGGACCTTCTCCGCGCCCGCGGGGGCGCCCGTCAACGGGGCCGCGCCCGCCGCCGACGGCGAGG
GCGTGCGCGCCCCCCTGGCCGGCACCGTCGCCCGGATCCCGGTCGAGGAGGGCCAGGAGATCGAGGCCGGCGCCGTGCTG
GTGGTGCTCGAGGCGATGAAGATGGAGACCGAGATCACCGCCCCGGCGGCCGGCACCGTCGGCAGCATCCTGGTCAAGCC
CGGCGACGCCGTCACCGGCGGCCAGCTGTTGGTCGAGCTCGCCTGA

Upstream 100 bases:

>100_bases
CCGGTCAGGCATGGGCCCAGCAGGGTCGCGTGGCGGTGCAGGGTCACCGGATCATCCATGGTGCCCGGTGACGGGGCCCG
GTCAAGGCGAAGGTGAGGAC

Downstream 100 bases:

>100_bases
CGCCGCCGGCGGTTTCCCCGGTGAACCGGGGAAACCGGAACTGTTGGCCCGAAGTTCCGGCCCAACAGTTCCGGGATTGC
CCGGGAAGTACCGGTGCCCC

Product: biotin/lipoyl attachment domain-containing protein

Products: NA

Alternate protein names: Biotin carboxyl carrier protein of transcarboxylase; Transcarboxylase, 1.3S subunit [H]

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MQLKVTVNGQVYEVEVEVEEEQPPTLGIFMAGGTFSAPAGAPVNGAAPAADGEGVRAPLAGTVARIPVEEGQEIEAGAVL
VVLEAMKMETEITAPAAGTVGSILVKPGDAVTGGQLLVELA

Sequences:

>Translated_121_residues
MQLKVTVNGQVYEVEVEVEEEQPPTLGIFMAGGTFSAPAGAPVNGAAPAADGEGVRAPLAGTVARIPVEEGQEIEAGAVL
VVLEAMKMETEITAPAAGTVGSILVKPGDAVTGGQLLVELA
>Mature_121_residues
MQLKVTVNGQVYEVEVEVEEEQPPTLGIFMAGGTFSAPAGAPVNGAAPAADGEGVRAPLAGTVARIPVEEGQEIEAGAVL
VVLEAMKMETEITAPAAGTVGSILVKPGDAVTGGQLLVELA

Specific function: The biotinyl 1.3S subunit serves as a carboxyl carrier between the substrate binding sites on the 12S and 5S subunits [H]

COG id: COG0511

COG function: function code I; Biotin carboxyl carrier protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 biotinyl-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001882
- InterPro:   IPR000089
- InterPro:   IPR011053 [H]

Pfam domain/function: PF00364 Biotin_lipoyl [H]

EC number: =2.1.3.1 [H]

Molecular weight: Translated: 12123; Mature: 12123

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKVTVNGQVYEVEVEVEEEQPPTLGIFMAGGTFSAPAGAPVNGAAPAADGEGVRAPLA
CEEEEEECCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTVARIPVEEGQEIEAGAVLVVLEAMKMETEITAPAAGTVGSILVKPGDAVTGGQLLVEL
CEEEECCCCCCCEECCCEEEEEEEHHHCCCEECCCCCCCCEEEEECCCCCCCCCEEEEEE
A
C
>Mature Secondary Structure
MQLKVTVNGQVYEVEVEVEEEQPPTLGIFMAGGTFSAPAGAPVNGAAPAADGEGVRAPLA
CEEEEEECCEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GTVARIPVEEGQEIEAGAVLVVLEAMKMETEITAPAAGTVGSILVKPGDAVTGGQLLVEL
CEEEECCCCCCCEECCCEEEEEEEHHHCCCEECCCCCCCCEEEEECCCCCCCCCEEEEEE
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3898065; 40985; 1526981; 9398186; 10704200 [H]