| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715447
Identifier: 119715447
GI number: 119715447
Start: 1284629
End: 1285105
Strand: Direct
Name: 119715447
Synonym: Noca_1211
Alternate gene names: NA
Gene position: 1284629-1285105 (Clockwise)
Preceding gene: 119715446
Following gene: 119715448
Centisome position: 25.77
GC content: 76.73
Gene sequence:
>477_bases GTGATCGGCCACCACCTGGGCTCGCGCACCAGCGCCCTGCTCGACGGTCAGCTCTCCACCGACGAGACCGAGCGGGCCTG GGCGCACGTGCACGGCTGCCACGCGTGCCGCGACCTCGTCGAGCGCGAGGGCTGGATCAAGACCCGGCTCGCGGGCCTCT CCTTCGAGGTCGCCGCGCCCGCGGCCCCGGCCTGGCTGAAGGGCTCGCTGATCGACGCCTCGGCCGGCTGCGGCTCGGCG TGCCTCACGATGGCGGCGCCGGCCGACCACCGACGCCGCAACCTCGGCCTGGCCGCCATCGGCGGCGGCGCCGTCGGCGC CGCGGTGATGGGCGTCCTGGTGTTCGGGGTCGCGCCCGCCGACGCCCCCACCATCGACCGGCGGGCGCCGCTCACCTCGA TCACGAACACCCAGGCTCCCCGGACGCCGACGCCGACGGTGCCGGCCGCCCACGTCACCCGACAGGCGAAGCGGTAG
Upstream 100 bases:
>100_bases TGCTGCGCTCCGCCCTCGCGCACCGGGCGCCGAGCGCCGGCCGGGTGCGGTACGCCGGTCCCGCGGCCGGGCCGCTGCTC TCGGGCTGGGGGTCCGCGAC
Downstream 100 bases:
>100_bases CGAGCCCGCCGGTCCCGGATTTCGCGGCGCGGGTCAAGATAGTGCCGTGACGCAGGACGAGCCCCGCGACGACGAGTCGA CGCAGCCGCTGGCGGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MIGHHLGSRTSALLDGQLSTDETERAWAHVHGCHACRDLVEREGWIKTRLAGLSFEVAAPAAPAWLKGSLIDASAGCGSA CLTMAAPADHRRRNLGLAAIGGGAVGAAVMGVLVFGVAPADAPTIDRRAPLTSITNTQAPRTPTPTVPAAHVTRQAKR
Sequences:
>Translated_158_residues MIGHHLGSRTSALLDGQLSTDETERAWAHVHGCHACRDLVEREGWIKTRLAGLSFEVAAPAAPAWLKGSLIDASAGCGSA CLTMAAPADHRRRNLGLAAIGGGAVGAAVMGVLVFGVAPADAPTIDRRAPLTSITNTQAPRTPTPTVPAAHVTRQAKR >Mature_158_residues MIGHHLGSRTSALLDGQLSTDETERAWAHVHGCHACRDLVEREGWIKTRLAGLSFEVAAPAAPAWLKGSLIDASAGCGSA CLTMAAPADHRRRNLGLAAIGGGAVGAAVMGVLVFGVAPADAPTIDRRAPLTSITNTQAPRTPTPTVPAAHVTRQAKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16327; Mature: 16327
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGHHLGSRTSALLDGQLSTDETERAWAHVHGCHACRDLVEREGWIKTRLAGLSFEVAAP CCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCC AAPAWLKGSLIDASAGCGSACLTMAAPADHRRRNLGLAAIGGGAVGAAVMGVLVFGVAPA CCCCHHCCCEECCCCCCCHHHHHHCCCCHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCC DAPTIDRRAPLTSITNTQAPRTPTPTVPAAHVTRQAKR CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure MIGHHLGSRTSALLDGQLSTDETERAWAHVHGCHACRDLVEREGWIKTRLAGLSFEVAAP CCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCEEEECCC AAPAWLKGSLIDASAGCGSACLTMAAPADHRRRNLGLAAIGGGAVGAAVMGVLVFGVAPA CCCCHHCCCEECCCCCCCHHHHHHCCCCHHHHHCCCEEEECCHHHHHHHHHHHHHHCCCC DAPTIDRRAPLTSITNTQAPRTPTPTVPAAHVTRQAKR CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA