| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715431
Identifier: 119715431
GI number: 119715431
Start: 1269039
End: 1270001
Strand: Reverse
Name: 119715431
Synonym: Noca_1195
Alternate gene names: NA
Gene position: 1270001-1269039 (Counterclockwise)
Preceding gene: 119715432
Following gene: 119715430
Centisome position: 25.47
GC content: 73.1
Gene sequence:
>963_bases GTGACTGCGACAGCTGCGACACGGCCCAGCACTGCCTGGGGCTTCGGCCTCGCGACGATCGACGGCGCGGGCACGGTCCT CGACGTCTGGTTCCCGTCCCCCGCCCTGGGCGAGGCGCCGGCCGACGCGGTGACGCCGGCGGAGCTGAGCGCGCTGCAGA GCCGCGACAAGGACCGCGGGGTGACCCGCGAGGTGCTGCTGGTCGAGATCGCGGACCTGCAGGCCCCGCCGACGGCGACC GAGGACGTGTGGTTGCGGCTGCACCTGCTGTCGACGCGGCTCGTCGTACCCCACTCGGTGAACCTGGACGGCGTCTTCGG CCTGCTCACGAACGTGGTGTGGACCAGTGCCGGCCCGTGCGCCGTCGAGGGCTTCGAGGCGACCCGGGCGCGGCTGAGCG CGAACGGGCGGCACCTCACGGTCTTCGGCGTCGACAAGTTCCCGCGGATGGTCGACTACGTGCTGCCCAGCGGCGTCCGG GTGGCCGACGGCGACCGGGTGCGGCTCGGCGCGCACCTGGCCGAGGGCACCACGGTGATGCACGAGGGCTTCGTCAACTA CAACGCCGGGACGCTCGGCGCCTCCATGGTCGAGGGCCGGATCTCCGCGGGCGTCGTCGTCGGCGACGGCTCCGACGTGG GCGGCGGCGCCTCGGTCATGGGCACCCTCTCCGGCGGCGGCAAGGAGGTCATCTCGATCGGCCGGCGCTGCCTGCTCGGC GCCAACGCCGGCATCGGCATCTCCCTGGGCGACGACTGCGTGGTCGAGGCCGGGTGCTACGTCACCGCCGGCACCAAGGT GACCGTGCGCGACCTGGACGGCAAGCCCAAGGTGGTCAAGGCGCTGGAGCTCTCCGGCGCCAGCAACGTGCTGTTCCGCC GCAACTCGGTCACCGGAGCGATCGAGGCGGTCCCGTGGCAGGGCGGCGGCATCGAGCTGAACGCCGCGCTGCACGCCAAC TGA
Upstream 100 bases:
>100_bases GGTGGAGGAGTACGCCCGGCACTGCGGCCACGCCGACCTGCTCCGCGAGTCCGTGGACGGCCGCACCGGCCAGTGACCGC GGCGCCCTAGGGTGTACGCC
Downstream 100 bases:
>100_bases TCGGTTTCACCCGACCCTGACACTTGCCTCATGGTGACCCGGACGGCGACGGCATGAGGACGCGCACGGGTGTCGCGCTG CTGGGACTCGCCGCCGTCGG
Product: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
Products: CoA; (R)-2-(succinylamino)-6-oxoheptanedioate
Alternate protein names: Transferase; Tetrahydrodipicolinate Succinylase; Tetrahydropicolinate Succinylase; Tetrahydrodipicolinate N- Succinyltransferase; Transferase Hexapeptide Repeat Containing Protein; Succinyltransferase; Succinyl-Transferase; Tranferase; Tetrahydrodipicolinate N-Succinyltransferase-Like Protein; Lysine Biosynthesis-Like Protein; Transferase Tetrahydrodipicolinate N-Succinyltransferase
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MTATAATRPSTAWGFGLATIDGAGTVLDVWFPSPALGEAPADAVTPAELSALQSRDKDRGVTREVLLVEIADLQAPPTAT EDVWLRLHLLSTRLVVPHSVNLDGVFGLLTNVVWTSAGPCAVEGFEATRARLSANGRHLTVFGVDKFPRMVDYVLPSGVR VADGDRVRLGAHLAEGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASVMGTLSGGGKEVISIGRRCLLG ANAGIGISLGDDCVVEAGCYVTAGTKVTVRDLDGKPKVVKALELSGASNVLFRRNSVTGAIEAVPWQGGGIELNAALHAN
Sequences:
>Translated_320_residues MTATAATRPSTAWGFGLATIDGAGTVLDVWFPSPALGEAPADAVTPAELSALQSRDKDRGVTREVLLVEIADLQAPPTAT EDVWLRLHLLSTRLVVPHSVNLDGVFGLLTNVVWTSAGPCAVEGFEATRARLSANGRHLTVFGVDKFPRMVDYVLPSGVR VADGDRVRLGAHLAEGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASVMGTLSGGGKEVISIGRRCLLG ANAGIGISLGDDCVVEAGCYVTAGTKVTVRDLDGKPKVVKALELSGASNVLFRRNSVTGAIEAVPWQGGGIELNAALHAN >Mature_319_residues TATAATRPSTAWGFGLATIDGAGTVLDVWFPSPALGEAPADAVTPAELSALQSRDKDRGVTREVLLVEIADLQAPPTATE DVWLRLHLLSTRLVVPHSVNLDGVFGLLTNVVWTSAGPCAVEGFEATRARLSANGRHLTVFGVDKFPRMVDYVLPSGVRV ADGDRVRLGAHLAEGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASVMGTLSGGGKEVISIGRRCLLGA NAGIGISLGDDCVVEAGCYVTAGTKVTVRDLDGKPKVVKALELSGASNVLFRRNSVTGAIEAVPWQGGGIELNAALHAN
Specific function: Unknown
COG id: COG2171
COG function: function code E; Tetrahydrodipicolinate N-succinyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.117
Molecular weight: Translated: 32908; Mature: 32777
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATAATRPSTAWGFGLATIDGAGTVLDVWFPSPALGEAPADAVTPAELSALQSRDKDRG CCCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC VTREVLLVEIADLQAPPTATEDVWLRLHLLSTRLVVPHSVNLDGVFGLLTNVVWTSAGPC CCEEEEEEEEECCCCCCCCCHHHEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC AVEGFEATRARLSANGRHLTVFGVDKFPRMVDYVLPSGVRVADGDRVRLGAHLAEGTTVM EECCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEECCCCEEEEEEEECCCCEEE HEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASVMGTLSGGGKEVISIGRRCLLG ECCCEECCCCCCCHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHCCCEEEE ANAGIGISLGDDCVVEAGCYVTAGTKVTVRDLDGKPKVVKALELSGASNVLFRRNSVTGA CCCCCEEEECCCEEEECCEEEEECCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCEE IEAVPWQGGGIELNAALHAN EEEECCCCCCEEEEEEEECC >Mature Secondary Structure TATAATRPSTAWGFGLATIDGAGTVLDVWFPSPALGEAPADAVTPAELSALQSRDKDRG CCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC VTREVLLVEIADLQAPPTATEDVWLRLHLLSTRLVVPHSVNLDGVFGLLTNVVWTSAGPC CCEEEEEEEEECCCCCCCCCHHHEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCC AVEGFEATRARLSANGRHLTVFGVDKFPRMVDYVLPSGVRVADGDRVRLGAHLAEGTTVM EECCCHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEECCCCEEEEEEEECCCCEEE HEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASVMGTLSGGGKEVISIGRRCLLG ECCCEECCCCCCCHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHCCCEEEE ANAGIGISLGDDCVVEAGCYVTAGTKVTVRDLDGKPKVVKALELSGASNVLFRRNSVTGA CCCCCEEEECCCEEEECCEEEEECCEEEEEECCCCCCEEEEEECCCCCCEEEEECCCCEE IEAVPWQGGGIELNAALHAN EEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: succinyl-CoA; (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate; H2O
Specific reaction: succinyl-CoA + (R)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate + H2O = CoA + (R)-2-(succinylamino)-6-oxoheptanedioate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA