| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715432
Identifier: 119715432
GI number: 119715432
Start: 1270026
End: 1270550
Strand: Reverse
Name: 119715432
Synonym: Noca_1196
Alternate gene names: NA
Gene position: 1270550-1270026 (Counterclockwise)
Preceding gene: 119715435
Following gene: 119715431
Centisome position: 25.48
GC content: 73.52
Gene sequence:
>525_bases ATGAGTGAGCCCGAGCGGCCGGACCGCCGCGACTACCGGTCCACCCACGGCGAGCGCGACACGGTGCTGACCTACCTGCG CAACTACCGGATCACGTTCGAGATGAAGTGCGAGGGCCTGGACCCCGAGCAGCTCGCCCGGCGTGCCGTGCCGCCCTCGA CGCTCTCGCTGCTGGGCCTGCTGAGGCACCTCGCGAAGGTCGAGCACAGCTGGAACCGCCGGGTCCTGCAGGAGCGGATG GACCTGCCGCGGCTGTACTGGTCCGCGGACACGCCCGACCTGGACTTCGACGGAGCCGCCCCCGACCCGGACCTGGTGGC GGACGCCTGGGAGTCGTGGCGCCGCGAGGTCGCCGACGCCGACGCGTGGCTGGCCGCGGAGCAGGACTGGGGCCGGCTGG TCCCCGTGCACGGCGAGCCGACCGAGGTGCGCGACATCGCCGTGCACCTGGTGGAGGAGTACGCCCGGCACTGCGGCCAC GCCGACCTGCTCCGCGAGTCCGTGGACGGCCGCACCGGCCAGTGA
Upstream 100 bases:
>100_bases ACTCCTTCCATTCTGGACCCGAGAGCAGGACGACGGAAGCGTGTCACCGCCGACCGACAACCCGATTGCGTTCTCCACAC CCGGCTGGTCGAGTAGACGC
Downstream 100 bases:
>100_bases CCGCGGCGCCCTAGGGTGTACGCCGTGACTGCGACAGCTGCGACACGGCCCAGCACTGCCTGGGGCTTCGGCCTCGCGAC GATCGACGGCGCGGGCACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSEPERPDRRDYRSTHGERDTVLTYLRNYRITFEMKCEGLDPEQLARRAVPPSTLSLLGLLRHLAKVEHSWNRRVLQERM DLPRLYWSADTPDLDFDGAAPDPDLVADAWESWRREVADADAWLAAEQDWGRLVPVHGEPTEVRDIAVHLVEEYARHCGH ADLLRESVDGRTGQ
Sequences:
>Translated_174_residues MSEPERPDRRDYRSTHGERDTVLTYLRNYRITFEMKCEGLDPEQLARRAVPPSTLSLLGLLRHLAKVEHSWNRRVLQERM DLPRLYWSADTPDLDFDGAAPDPDLVADAWESWRREVADADAWLAAEQDWGRLVPVHGEPTEVRDIAVHLVEEYARHCGH ADLLRESVDGRTGQ >Mature_173_residues SEPERPDRRDYRSTHGERDTVLTYLRNYRITFEMKCEGLDPEQLARRAVPPSTLSLLGLLRHLAKVEHSWNRRVLQERMD LPRLYWSADTPDLDFDGAAPDPDLVADAWESWRREVADADAWLAAEQDWGRLVPVHGEPTEVRDIAVHLVEEYARHCGHA DLLRESVDGRTGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007061 [H]
Pfam domain/function: PF04978 DUF664 [H]
EC number: NA
Molecular weight: Translated: 20124; Mature: 19992
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPERPDRRDYRSTHGERDTVLTYLRNYRITFEMKCEGLDPEQLARRAVPPSTLSLLGL CCCCCCCCHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHH LRHLAKVEHSWNRRVLQERMDLPRLYWSADTPDLDFDGAAPDPDLVADAWESWRREVADA HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC DAWLAAEQDWGRLVPVHGEPTEVRDIAVHLVEEYARHCGHADLLRESVDGRTGQ HHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC >Mature Secondary Structure SEPERPDRRDYRSTHGERDTVLTYLRNYRITFEMKCEGLDPEQLARRAVPPSTLSLLGL CCCCCCCHHHHHHCCCCHHHHHHHHHHCCEEEEEEECCCCHHHHHHHCCCHHHHHHHHH LRHLAKVEHSWNRRVLQERMDLPRLYWSADTPDLDFDGAAPDPDLVADAWESWRREVADA HHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC DAWLAAEQDWGRLVPVHGEPTEVRDIAVHLVEEYARHCGHADLLRESVDGRTGQ HHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2575701; 12000953 [H]