| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119715430
Identifier: 119715430
GI number: 119715430
Start: 1268023
End: 1268985
Strand: Reverse
Name: 119715430
Synonym: Noca_1194
Alternate gene names: NA
Gene position: 1268985-1268023 (Counterclockwise)
Preceding gene: 119715431
Following gene: 119715427
Centisome position: 25.45
GC content: 73.0
Gene sequence:
>963_bases ATGAGGACGCGCACGGGTGTCGCGCTGCTGGGACTCGCCGCCGTCGGGGTGGTGGCGGCCGTGGGGTACGGCGTGCTCGA CCACGTCTCCCCGCTGTTGCAGCGCGACGAGTGCACCGCGACCGTCAGCGGCCGCGCCGTGCACCTGTCGGTCGAGCAGG CCGAGAACGCGGCGCTGATCACCGCGATCTCGGTCGGCCGCGGGATGCCGGCCCGGGCGGCGACGATCGCCCTGGCCACG GCGTACCAGGAGTCGAAGCTCTACAACGTCGAGTCCGGCGACCGCGACTCGCTCGGGCTGTTCCAGCAGCGGCCCTCCCA GGGCTGGGGGACGGCCGAGCAGGTGCTGGATCCCTACTACGCGACCAACGCGTTCTACGACGCCCTGGAGAAGATCGGCG ACTACGAGTCGATGCGGGTGACCGTCGCGGCCCAGGAGGTGCAGCGCTCCGGGTTCCCCGAGGCGTACGCCGACCACGAG GCCGACGCCCGGGTGCTCGCCTCGGCCCTCACCGGGAACTCCCGCCACGCGTTCACCTGCCGGATCTCGGACCCGCCCGA CGCCGAGCCGGACCGGCTGCGCGACTCGGGGCTGACCCGCCGCGCCGACGTCGTACGCCGGGAGGTCGGGCAGCTGTTCG GCCAGCCGCCGATGGGCGGCTTCGCCCAGGGCGGGGTGTCGACCGGCCACATGGAGGGGTCCACGCACTACGGCGGCCGC GCGATCGACGTCTTCGTCCGGCCGGTCAGCGCGGAGAACAAGGTCCGCGGCTGGGCGATCGCGCAGTACCTCGTGGCCAT GGCCGACCGGCTCGGCATCCAGCACGTGATCTTCGACGACCGGATCTGGACCTCCGGCAGCTCCTCCGACGACGGCTGGC GCGACTACGACCCGCCCGAGCGGGCCGGGGACCGCGCGATCCTCGAGCACCGCGACCACGTGCACGTCGACGTGTTCGAC TGA
Upstream 100 bases:
>100_bases GGCAGGGCGGCGGCATCGAGCTGAACGCCGCGCTGCACGCCAACTGATCGGTTTCACCCGACCCTGACACTTGCCTCATG GTGACCCGGACGGCGACGGC
Downstream 100 bases:
>100_bases TGAGCCGGGCCGCCATCGCAGGGAATCTCGCCCGGTAGTCCCTGACGATTGCGTGGTCCGGGAGCGCTCCCAACCGCGCA ATCGTCAGGGACTACCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRTRTGVALLGLAAVGVVAAVGYGVLDHVSPLLQRDECTATVSGRAVHLSVEQAENAALITAISVGRGMPARAATIALAT AYQESKLYNVESGDRDSLGLFQQRPSQGWGTAEQVLDPYYATNAFYDALEKIGDYESMRVTVAAQEVQRSGFPEAYADHE ADARVLASALTGNSRHAFTCRISDPPDAEPDRLRDSGLTRRADVVRREVGQLFGQPPMGGFAQGGVSTGHMEGSTHYGGR AIDVFVRPVSAENKVRGWAIAQYLVAMADRLGIQHVIFDDRIWTSGSSSDDGWRDYDPPERAGDRAILEHRDHVHVDVFD
Sequences:
>Translated_320_residues MRTRTGVALLGLAAVGVVAAVGYGVLDHVSPLLQRDECTATVSGRAVHLSVEQAENAALITAISVGRGMPARAATIALAT AYQESKLYNVESGDRDSLGLFQQRPSQGWGTAEQVLDPYYATNAFYDALEKIGDYESMRVTVAAQEVQRSGFPEAYADHE ADARVLASALTGNSRHAFTCRISDPPDAEPDRLRDSGLTRRADVVRREVGQLFGQPPMGGFAQGGVSTGHMEGSTHYGGR AIDVFVRPVSAENKVRGWAIAQYLVAMADRLGIQHVIFDDRIWTSGSSSDDGWRDYDPPERAGDRAILEHRDHVHVDVFD >Mature_320_residues MRTRTGVALLGLAAVGVVAAVGYGVLDHVSPLLQRDECTATVSGRAVHLSVEQAENAALITAISVGRGMPARAATIALAT AYQESKLYNVESGDRDSLGLFQQRPSQGWGTAEQVLDPYYATNAFYDALEKIGDYESMRVTVAAQEVQRSGFPEAYADHE ADARVLASALTGNSRHAFTCRISDPPDAEPDRLRDSGLTRRADVVRREVGQLFGQPPMGGFAQGGVSTGHMEGSTHYGGR AIDVFVRPVSAENKVRGWAIAQYLVAMADRLGIQHVIFDDRIWTSGSSSDDGWRDYDPPERAGDRAILEHRDHVHVDVFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34657; Mature: 34657
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRTGVALLGLAAVGVVAAVGYGVLDHVSPLLQRDECTATVSGRAVHLSVEQAENAALI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCEEE TAISVGRGMPARAATIALATAYQESKLYNVESGDRDSLGLFQQRPSQGWGTAEQVLDPYY EEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHCCCCCCCCCHHHHHCCHH ATNAFYDALEKIGDYESMRVTVAAQEVQRSGFPEAYADHEADARVLASALTGNSRHAFTC HHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCHHCCCCHHHHHHHHHHCCCCCEEEEE RISDPPDAEPDRLRDSGLTRRADVVRREVGQLFGQPPMGGFAQGGVSTGHMEGSTHYGGR ECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE AIDVFVRPVSAENKVRGWAIAQYLVAMADRLGIQHVIFDDRIWTSGSSSDDGWRDYDPPE EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCCHH RAGDRAILEHRDHVHVDVFD HCCCHHHHHCCCEEEEEECC >Mature Secondary Structure MRTRTGVALLGLAAVGVVAAVGYGVLDHVSPLLQRDECTATVSGRAVHLSVEQAENAALI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCCCEEE TAISVGRGMPARAATIALATAYQESKLYNVESGDRDSLGLFQQRPSQGWGTAEQVLDPYY EEEECCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHCCCCCCCCCHHHHHCCHH ATNAFYDALEKIGDYESMRVTVAAQEVQRSGFPEAYADHEADARVLASALTGNSRHAFTC HHHHHHHHHHHHCCCCCEEEEEEHHHHHHCCCCCHHCCCCHHHHHHHHHHCCCCCEEEEE RISDPPDAEPDRLRDSGLTRRADVVRREVGQLFGQPPMGGFAQGGVSTGHMEGSTHYGGR ECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCE AIDVFVRPVSAENKVRGWAIAQYLVAMADRLGIQHVIFDDRIWTSGSSSDDGWRDYDPPE EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCEEECCCCCCCCCCCCCCCHH RAGDRAILEHRDHVHVDVFD HCCCHHHHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA