| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is ppsA [H]
Identifier: 119715421
GI number: 119715421
Start: 1259324
End: 1260151
Strand: Direct
Name: ppsA [H]
Synonym: Noca_1185
Alternate gene names: 119715421
Gene position: 1259324-1260151 (Clockwise)
Preceding gene: 119715420
Following gene: 119715422
Centisome position: 25.26
GC content: 69.93
Gene sequence:
>828_bases ATGCCCGAGACCCCCCTCGTCCTCCCCTTCACCGACGCGCGATGCCGCGAGGTCGCGTTGTCGGGGGGCAAGGGCGCGAG CCTCGCCGCCATGACCCAGAACGGGCTCCCGGTGCCGCCCGGCTTCGTGATCACGTCGACCGCGTTCGGGGAGGCGGTGG ATGCGGGGAGGCTCTTGGGCTGCCTCGAGGTCCGAGACCTGGAGGGCGCCCGTGCCGTCGTGGCGGAGACCGAGCCGCCC GTCGAGCTGGTGAGGGCCGCCTACGACGAGCTACCGCGAGGCACCTCCGTGGCGGTGCGGTCCTCGGCCTGCGCCGAGGA CGGGAACGACGCGTCGTACGCGGGCCAGCAGGAGACCTACCTGTTCGTCGAGTCGTTGGACGACGTGCTGGAGAAGGTGG TGGACTGCTGGCTCTCCTTCTTCTCCGATCGTGCGCTGTTCTATCGCGAGCACAAGGGAGACCTGCAGGACATCTCCATG GCCGTCGTCGTCCAGCAGATGGTCGACGCGGAGAAGGCGGGTGTCATGTTCACCGTCGACCCGGTGAACCACCGCCGGGA CCGCATCGTCGTCGAGGCCGCCCGCGGCGTCGGGGAGCACGTCGTCTCCGGCGAGGTCACCCCCGACTACTACACGCTGG ACCGGCAGGGAACGCTGAAGAAGGCGCGGGTCGTCGACGAACAGGTCCTCTCGGAGGCCGAGCTGGCCGAGCTCGCGCGG CTGGGGCTCCACCTCGCGGAGCTGAACGGCTGCCCCCAGGACATCGAGTGGGCCTACGACTCCACCGGCCTCTACATGCT GCAGTCGCGGCCCGTCACGACGCTCTAG
Upstream 100 bases:
>100_bases CCGACCAAGGTGAGAGCGCGGCGGACCGGGCTGCCCATGCGCGAGGTCAGCTGTGAGCACGGCGGTCCGACCGGAAGCAT CCATTCGGAAGGACGCGTCC
Downstream 100 bases:
>100_bases CGACCACCTGATGTCCATGGGCGGAGCCGGGGAGGCCGGCCAGTGAGGTACGTGACCTACGAGTCTCCGGAAGGCCGCGG TCGCCGGGTCGGGTACCTCG
Product: pyruvate, water dikinase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase; Mja pepA intein [H]
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MPETPLVLPFTDARCREVALSGGKGASLAAMTQNGLPVPPGFVITSTAFGEAVDAGRLLGCLEVRDLEGARAVVAETEPP VELVRAAYDELPRGTSVAVRSSACAEDGNDASYAGQQETYLFVESLDDVLEKVVDCWLSFFSDRALFYREHKGDLQDISM AVVVQQMVDAEKAGVMFTVDPVNHRRDRIVVEAARGVGEHVVSGEVTPDYYTLDRQGTLKKARVVDEQVLSEAELAELAR LGLHLAELNGCPQDIEWAYDSTGLYMLQSRPVTTL
Sequences:
>Translated_275_residues MPETPLVLPFTDARCREVALSGGKGASLAAMTQNGLPVPPGFVITSTAFGEAVDAGRLLGCLEVRDLEGARAVVAETEPP VELVRAAYDELPRGTSVAVRSSACAEDGNDASYAGQQETYLFVESLDDVLEKVVDCWLSFFSDRALFYREHKGDLQDISM AVVVQQMVDAEKAGVMFTVDPVNHRRDRIVVEAARGVGEHVVSGEVTPDYYTLDRQGTLKKARVVDEQVLSEAELAELAR LGLHLAELNGCPQDIEWAYDSTGLYMLQSRPVTTL >Mature_274_residues PETPLVLPFTDARCREVALSGGKGASLAAMTQNGLPVPPGFVITSTAFGEAVDAGRLLGCLEVRDLEGARAVVAETEPPV ELVRAAYDELPRGTSVAVRSSACAEDGNDASYAGQQETYLFVESLDDVLEKVVDCWLSFFSDRALFYREHKGDLQDISMA VVVQQMVDAEKAGVMFTVDPVNHRRDRIVVEAARGVGEHVVSGEVTPDYYTLDRQGTLKKARVVDEQVLSEAELAELARL GLHLAELNGCPQDIEWAYDSTGLYMLQSRPVTTL
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DOD-type homing endonuclease domain [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=333, Percent_Identity=35.1351351351351, Blast_Score=139, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17564524, Length=285, Percent_Identity=36.8421052631579, Blast_Score=159, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR003587 - InterPro: IPR004042 - InterPro: IPR006141 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR006319 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 29865; Mature: 29734
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETPLVLPFTDARCREVALSGGKGASLAAMTQNGLPVPPGFVITSTAFGEAVDAGRLLG CCCCCEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHH CLEVRDLEGARAVVAETEPPVELVRAAYDELPRGTSVAVRSSACAEDGNDASYAGQQETY HEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCCCHHH LFVESLDDVLEKVVDCWLSFFSDRALFYREHKGDLQDISMAVVVQQMVDAEKAGVMFTVD HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC PVNHRRDRIVVEAARGVGEHVVSGEVTPDYYTLDRQGTLKKARVVDEQVLSEAELAELAR CCCCCHHEEEEEHHHCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH LGLHLAELNGCPQDIEWAYDSTGLYMLQSRPVTTL HHHHHHHHCCCCCCCCEEECCCCEEEEECCCCCCC >Mature Secondary Structure PETPLVLPFTDARCREVALSGGKGASLAAMTQNGLPVPPGFVITSTAFGEAVDAGRLLG CCCCEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHHHHHHH CLEVRDLEGARAVVAETEPPVELVRAAYDELPRGTSVAVRSSACAEDGNDASYAGQQETY HEEEECCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCCCCHHH LFVESLDDVLEKVVDCWLSFFSDRALFYREHKGDLQDISMAVVVQQMVDAEKAGVMFTVD HHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEC PVNHRRDRIVVEAARGVGEHVVSGEVTPDYYTLDRQGTLKKARVVDEQVLSEAELAELAR CCCCCHHEEEEEHHHCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH LGLHLAELNGCPQDIEWAYDSTGLYMLQSRPVTTL HHHHHHHHCCCCCCCCEEECCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]