Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715388

Identifier: 119715388

GI number: 119715388

Start: 1222197

End: 1223807

Strand: Reverse

Name: 119715388

Synonym: Noca_1150

Alternate gene names: NA

Gene position: 1223807-1222197 (Counterclockwise)

Preceding gene: 119715390

Following gene: 119715385

Centisome position: 24.55

GC content: 73.18

Gene sequence:

>1611_bases
ATGTCAGTGGAGAGCTCGCCACCGTCCGGGCGCCGGCGCGGCCGGCCGCAGCGGCTCCCGGAGGATCCGCACGCGCTCAG
TTCCGGCCTGGTCGGCTGCGACCAGCGGATCGCCTGGCTGGTGACCGTTGCCCGGGTGCTCGGGCCCGATCCCGATCTCG
CTCGCCGTGACGGCTTCATCGCCGCGCTGCGCGACCGCGACATCCTGGTCGACGCCTCCCGGGTCTCGCGCTGGGAGTCC
GGGCTGCAGCCGCTACCCAGCCGGGTGGCCGCGACGTACGAGTCGGTGCTCGGCCTGACTGAGGGCTCCTTGGTGTCGGT
CGCCAGCGGCCTGCGCCGCAGCTTCGGCACCGGCCCGAGCCCGCGGGAGAGCCTCCTGGGCGACACCGAGATGTCCGACC
CCGACCTGGACCGGCTGCTCGAGCTCGCCGAGACCGGCCGCGCGACCGGCGCTGACTGGCTCCATCTCACCGACCACTTC
AACCGGTTCGAGCGGGTGTTCCTCCGCGAGGACGACTGGACCAGGCTCTGCCACCGGCTCGTGACGGAGCTGGGATCGGC
GGTCGGCACTGCCTATGTACGCCGCTACGAGGCCGCAGCCGCCTTCATCCGCCACCCCAACGCGCAGCGGCACCTGATCC
TTGCGGTTGGCAGGTTCGTCACCGATCCTGACACTCAGGTCGTTGCCCCCATCCTCAACCTCCTCGGCGAGGTGCCGGAC
CCGGCGGCTGCAGCGCTGACGCTGCGAATGCTGTCGGCCGACAGCGAGAACAAGTACCTGCGCCGGGCGGCCTCGTCGGT
GGCCGCGGTGAAGCTCGCGCGGGGGCACTTCGACGAAGCGGCGCTCCCGCGCCTGGAGTCGCACGTTCTCGGCGCGCTGC
GCCGCGGCGAGTCCCTCGACGGCCGGCTGGACGCGTTCGACCTCGCCGTACGGCTGCCGGAGCAGTCGTGGGCACGAGTC
GCGGGCGGGCTACGCACCCGGCGGGCGTACGGACTGGTGACGCAGGCCCGGATCGACGACGAGCTGGTCCCGGCTGCCCG
GGCCGCCTCGCTCGTGGCGGAGCTCGCACCCGCGATCCAGGCCGACACGCCGTCCCACCAGGCCCAGGAGCCCGACCTGA
TGCTGCGCCGCCTGCTCCGTGAGGCGCTGCTGCACTCACACAAGCGGCGCCGCCACCACGCGGCACTGTTGCTCGCCGCC
TCGCCGTACGCACCCGCCACCGCGCGCCACTGCCTGCGGCTCGCCGCCGACGCCAACGACCTCCTCGCTGCACGTGCGTG
GACCGTGTTGATGCGGGTCGGCAACAGCAGCCAGCGTGACGGCGTCGTGCACCGAGCGATCGTCGAGGAGCGCCCGACCG
TACGGGCCCGCGCGCTCGTCAACGCCGGCCTCGGCGGAGAACTCACACCCGAGCAGAGCGCGACGATCGCGGGCGGGTAC
GAGTCCGCGCGCAGTCTCGAGCGGCACGCGACGCTCTTTGCGCTCGGGATGGCCGGGGCGCCCGAGCTGGCGCGTCTCGC
CGAGTCCGAGGACGCAGAGACCCAGCGCGGCGCGAAGTGGTGGCTGAGCCAGGGACCCGCCATCCATGACCGGGACGTCC
TCCAGGGCTGA

Upstream 100 bases:

>100_bases
GCGGATCGCGGTGTTGTTGTTGCAGGCGTGTCGGAAACCTGCAATAAATGTTCCTGGGTGGAAGGGACGTGCAGGCACGA
CACCCGACGATCGGGGGATC

Downstream 100 bases:

>100_bases
ACCGCGGCCCGAGCCCGAGGACGAGGACGGCACGGGCCCACGGTGGCGCTCACCGCGAACCCGTGCCGTCGGGGTGGTGC
TAGACGATCAACGGATCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 536; Mature: 535

Protein sequence:

>536_residues
MSVESSPPSGRRRGRPQRLPEDPHALSSGLVGCDQRIAWLVTVARVLGPDPDLARRDGFIAALRDRDILVDASRVSRWES
GLQPLPSRVAATYESVLGLTEGSLVSVASGLRRSFGTGPSPRESLLGDTEMSDPDLDRLLELAETGRATGADWLHLTDHF
NRFERVFLREDDWTRLCHRLVTELGSAVGTAYVRRYEAAAAFIRHPNAQRHLILAVGRFVTDPDTQVVAPILNLLGEVPD
PAAAALTLRMLSADSENKYLRRAASSVAAVKLARGHFDEAALPRLESHVLGALRRGESLDGRLDAFDLAVRLPEQSWARV
AGGLRTRRAYGLVTQARIDDELVPAARAASLVAELAPAIQADTPSHQAQEPDLMLRRLLREALLHSHKRRRHHAALLLAA
SPYAPATARHCLRLAADANDLLAARAWTVLMRVGNSSQRDGVVHRAIVEERPTVRARALVNAGLGGELTPEQSATIAGGY
ESARSLERHATLFALGMAGAPELARLAESEDAETQRGAKWWLSQGPAIHDRDVLQG

Sequences:

>Translated_536_residues
MSVESSPPSGRRRGRPQRLPEDPHALSSGLVGCDQRIAWLVTVARVLGPDPDLARRDGFIAALRDRDILVDASRVSRWES
GLQPLPSRVAATYESVLGLTEGSLVSVASGLRRSFGTGPSPRESLLGDTEMSDPDLDRLLELAETGRATGADWLHLTDHF
NRFERVFLREDDWTRLCHRLVTELGSAVGTAYVRRYEAAAAFIRHPNAQRHLILAVGRFVTDPDTQVVAPILNLLGEVPD
PAAAALTLRMLSADSENKYLRRAASSVAAVKLARGHFDEAALPRLESHVLGALRRGESLDGRLDAFDLAVRLPEQSWARV
AGGLRTRRAYGLVTQARIDDELVPAARAASLVAELAPAIQADTPSHQAQEPDLMLRRLLREALLHSHKRRRHHAALLLAA
SPYAPATARHCLRLAADANDLLAARAWTVLMRVGNSSQRDGVVHRAIVEERPTVRARALVNAGLGGELTPEQSATIAGGY
ESARSLERHATLFALGMAGAPELARLAESEDAETQRGAKWWLSQGPAIHDRDVLQG
>Mature_535_residues
SVESSPPSGRRRGRPQRLPEDPHALSSGLVGCDQRIAWLVTVARVLGPDPDLARRDGFIAALRDRDILVDASRVSRWESG
LQPLPSRVAATYESVLGLTEGSLVSVASGLRRSFGTGPSPRESLLGDTEMSDPDLDRLLELAETGRATGADWLHLTDHFN
RFERVFLREDDWTRLCHRLVTELGSAVGTAYVRRYEAAAAFIRHPNAQRHLILAVGRFVTDPDTQVVAPILNLLGEVPDP
AAAALTLRMLSADSENKYLRRAASSVAAVKLARGHFDEAALPRLESHVLGALRRGESLDGRLDAFDLAVRLPEQSWARVA
GGLRTRRAYGLVTQARIDDELVPAARAASLVAELAPAIQADTPSHQAQEPDLMLRRLLREALLHSHKRRRHHAALLLAAS
PYAPATARHCLRLAADANDLLAARAWTVLMRVGNSSQRDGVVHRAIVEERPTVRARALVNAGLGGELTPEQSATIAGGYE
SARSLERHATLFALGMAGAPELARLAESEDAETQRGAKWWLSQGPAIHDRDVLQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58347; Mature: 58216

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVESSPPSGRRRGRPQRLPEDPHALSSGLVGCDQRIAWLVTVARVLGPDPDLARRDGFI
CCCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCE
AALRDRDILVDASRVSRWESGLQPLPSRVAATYESVLGLTEGSLVSVASGLRRSFGTGPS
EEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
PRESLLGDTEMSDPDLDRLLELAETGRATGADWLHLTDHFNRFERVFLREDDWTRLCHRL
CHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VTELGSAVGTAYVRRYEAAAAFIRHPNAQRHLILAVGRFVTDPDTQVVAPILNLLGEVPD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHCCCCC
PAAAALTLRMLSADSENKYLRRAASSVAAVKLARGHFDEAALPRLESHVLGALRRGESLD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
GRLDAFDLAVRLPEQSWARVAGGLRTRRAYGLVTQARIDDELVPAARAASLVAELAPAIQ
CCCHHHHHHEECCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
ADTPSHQAQEPDLMLRRLLREALLHSHKRRRHHAALLLAASPYAPATARHCLRLAADAND
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCHH
LLAARAWTVLMRVGNSSQRDGVVHRAIVEERPTVRARALVNAGLGGELTPEQSATIAGGY
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEECCCH
ESARSLERHATLFALGMAGAPELARLAESEDAETQRGAKWWLSQGPAIHDRDVLQG
HHHHHHHHHHHHHEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCC
>Mature Secondary Structure 
SVESSPPSGRRRGRPQRLPEDPHALSSGLVGCDQRIAWLVTVARVLGPDPDLARRDGFI
CCCCCCCCCHHCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCE
AALRDRDILVDASRVSRWESGLQPLPSRVAATYESVLGLTEGSLVSVASGLRRSFGTGPS
EEECCCCEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCC
PRESLLGDTEMSDPDLDRLLELAETGRATGADWLHLTDHFNRFERVFLREDDWTRLCHRL
CHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VTELGSAVGTAYVRRYEAAAAFIRHPNAQRHLILAVGRFVTDPDTQVVAPILNLLGEVPD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCCHHHHHHHHHHHCCCCC
PAAAALTLRMLSADSENKYLRRAASSVAAVKLARGHFDEAALPRLESHVLGALRRGESLD
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
GRLDAFDLAVRLPEQSWARVAGGLRTRRAYGLVTQARIDDELVPAARAASLVAELAPAIQ
CCCHHHHHHEECCHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
ADTPSHQAQEPDLMLRRLLREALLHSHKRRRHHAALLLAASPYAPATARHCLRLAADAND
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCHH
LLAARAWTVLMRVGNSSQRDGVVHRAIVEERPTVRARALVNAGLGGELTPEQSATIAGGY
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEECCCH
ESARSLERHATLFALGMAGAPELARLAESEDAETQRGAKWWLSQGPAIHDRDVLQG
HHHHHHHHHHHHHEECCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA