Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119715385

Identifier: 119715385

GI number: 119715385

Start: 1216621

End: 1218084

Strand: Reverse

Name: 119715385

Synonym: Noca_1147

Alternate gene names: NA

Gene position: 1218084-1216621 (Counterclockwise)

Preceding gene: 119715388

Following gene: 119715384

Centisome position: 24.43

GC content: 68.99

Gene sequence:

>1464_bases
ATGACACAGATCACACCGGCGACTTTTCATCTCTCGCCGTCCGTAACCGAGACAGTGTGCGGAACCGACACAGAACGGCC
CGGGGAACTCTCGGTCCTACCGAGAGAGATGAGCCGCACCGCGATGGAGACCCGCCGGGCCGTCCGCACCCTTGTCACCG
CCCTCGCCGCCCTCGGCGTCGCCGCCCTCCTGGCAGCAGGCGTCACCCCGGGCGCGGATGCATCCCCGTCGACCGCGACA
GGCGCGAGGACCTCGACCGATCGGCCCGTCCTCTACCCGCGGCCCGTCGAGCAGCCGCTCCCCTCGATCGGTGTGGCTTT
GGAGCGTCCGGTCGTCCAGCCGGACTACCGGTTCCTCTCCTCCCCGGACTTCATGAACTCCGACATCGCCGACGTGAGCA
AGCTGCGGACCTGGCACCGCGGCCTGCCGAACTCCTGGAACTCCTCCTACGCGGCGACTGTCGACACCATCCTCGACACC
TTCGAGTCCGAGGCCCCAGAAGACGTGTTCGTGGCCGGCGACCTGGTGGAAGGGCACTGGGTGAGCGACGACGACCGCAC
CGGGCTCTTCGGTCCGGCCCGCACCCACGCGCAGCGGAAAGCCGCGATCAGGCGGGCCGCCGACTTCTACTTCTCCGAGT
GGCGCAAGCGCTTCGATCAGCGCGGGCTCCCGGTGTACGCCGCGGTCGGTGACCACGACATCGGCGACAACCCCTGGCGC
GGCGGCGGCAACGCGGAGGAGAACAGGTTCAAGCGCGACAACGTCGAGCTCTTCAAGGCGTCCTTCTCCAGAAAGGTGAT
CGCGCCCAACCGGGTGCCCGACCGGCCTCGCGGGCCAGCCCACGACACGGCCTACGCGACGTACGTCGACCCGGAGGTGC
TGCTGGTCACCGTCGACGTGTTCGAGCACACCAAGCGCAACGTCGTGGCCCACCTCGACCGCGCGCAGCTGGCGTGGCTC
GACCGGACCCTCGCGTCGGCCGAGCGGCGCGGCACCGACTGGATCGTGGTCCAGGGACACGTGCCGGTGCTCAAGCCGGT
CCGGATCTACGGATCCTCGGCCATGTACTACCGCGGCGGCGCCGGGTCGGCGTTCTGGCGGACCATGGCCCGGCACCACG
TCGACCTCTACCTCGACGGCGAGGTGCACGACATCAGCGTCCGCCGCCGCGACGGAATCACCCAGATCTCGCACGGAGGC
ACCATCCAGATGGCTTCGGCCGGCGGCTACGGGTCGACGAACTACCTGCTCGGCGAGGTGTTCGGCGACACCATGTTCCT
GCGCGACCACCGGTTCGCCCCGAAGATGATCGACTTCTCCAAACGGCTCTGGCAGGTCGGGCAGTCGCACCGACCCGTGG
TTCGCAAGGAGGTCTGGGACCGGCCGCTCGCCGTCGGCCACCTGGTGCTCACCAGCGACAACCAGGTCCAGTACAGCGAC
GGCGCGCTCATCCCGCTCAGCTGA

Upstream 100 bases:

>100_bases
CGTCGTGTCGTCCTGACGGGTGACGGCGACCTGGCGATCGAACTCGGAGCTCACGCCAGGAGCCTAGGGAGCGCCGGCGC
GCGGCCGCCGGCGGGTCGGC

Downstream 100 bases:

>100_bases
CCGGGTCGCGGTGCGGCACGATGGCCGCATGACCGATCGCCGGCCGCACTGGGTCTACGAGCCGGGCGAGGAGCCCGACC
CGCGGTTCACGCTCGCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 487; Mature: 486

Protein sequence:

>487_residues
MTQITPATFHLSPSVTETVCGTDTERPGELSVLPREMSRTAMETRRAVRTLVTALAALGVAALLAAGVTPGADASPSTAT
GARTSTDRPVLYPRPVEQPLPSIGVALERPVVQPDYRFLSSPDFMNSDIADVSKLRTWHRGLPNSWNSSYAATVDTILDT
FESEAPEDVFVAGDLVEGHWVSDDDRTGLFGPARTHAQRKAAIRRAADFYFSEWRKRFDQRGLPVYAAVGDHDIGDNPWR
GGGNAEENRFKRDNVELFKASFSRKVIAPNRVPDRPRGPAHDTAYATYVDPEVLLVTVDVFEHTKRNVVAHLDRAQLAWL
DRTLASAERRGTDWIVVQGHVPVLKPVRIYGSSAMYYRGGAGSAFWRTMARHHVDLYLDGEVHDISVRRRDGITQISHGG
TIQMASAGGYGSTNYLLGEVFGDTMFLRDHRFAPKMIDFSKRLWQVGQSHRPVVRKEVWDRPLAVGHLVLTSDNQVQYSD
GALIPLS

Sequences:

>Translated_487_residues
MTQITPATFHLSPSVTETVCGTDTERPGELSVLPREMSRTAMETRRAVRTLVTALAALGVAALLAAGVTPGADASPSTAT
GARTSTDRPVLYPRPVEQPLPSIGVALERPVVQPDYRFLSSPDFMNSDIADVSKLRTWHRGLPNSWNSSYAATVDTILDT
FESEAPEDVFVAGDLVEGHWVSDDDRTGLFGPARTHAQRKAAIRRAADFYFSEWRKRFDQRGLPVYAAVGDHDIGDNPWR
GGGNAEENRFKRDNVELFKASFSRKVIAPNRVPDRPRGPAHDTAYATYVDPEVLLVTVDVFEHTKRNVVAHLDRAQLAWL
DRTLASAERRGTDWIVVQGHVPVLKPVRIYGSSAMYYRGGAGSAFWRTMARHHVDLYLDGEVHDISVRRRDGITQISHGG
TIQMASAGGYGSTNYLLGEVFGDTMFLRDHRFAPKMIDFSKRLWQVGQSHRPVVRKEVWDRPLAVGHLVLTSDNQVQYSD
GALIPLS
>Mature_486_residues
TQITPATFHLSPSVTETVCGTDTERPGELSVLPREMSRTAMETRRAVRTLVTALAALGVAALLAAGVTPGADASPSTATG
ARTSTDRPVLYPRPVEQPLPSIGVALERPVVQPDYRFLSSPDFMNSDIADVSKLRTWHRGLPNSWNSSYAATVDTILDTF
ESEAPEDVFVAGDLVEGHWVSDDDRTGLFGPARTHAQRKAAIRRAADFYFSEWRKRFDQRGLPVYAAVGDHDIGDNPWRG
GGNAEENRFKRDNVELFKASFSRKVIAPNRVPDRPRGPAHDTAYATYVDPEVLLVTVDVFEHTKRNVVAHLDRAQLAWLD
RTLASAERRGTDWIVVQGHVPVLKPVRIYGSSAMYYRGGAGSAFWRTMARHHVDLYLDGEVHDISVRRRDGITQISHGGT
IQMASAGGYGSTNYLLGEVFGDTMFLRDHRFAPKMIDFSKRLWQVGQSHRPVVRKEVWDRPLAVGHLVLTSDNQVQYSDG
ALIPLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53969; Mature: 53838

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQITPATFHLSPSVTETVCGTDTERPGELSVLPREMSRTAMETRRAVRTLVTALAALGV
CCCCCCEEEEECCCHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLAAGVTPGADASPSTATGARTSTDRPVLYPRPVEQPLPSIGVALERPVVQPDYRFLS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCHHHCC
SPDFMNSDIADVSKLRTWHRGLPNSWNSSYAATVDTILDTFESEAPEDVFVAGDLVEGHW
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE
VSDDDRTGLFGPARTHAQRKAAIRRAADFYFSEWRKRFDQRGLPVYAAVGDHDIGDNPWR
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
GGGNAEENRFKRDNVELFKASFSRKVIAPNRVPDRPRGPAHDTAYATYVDPEVLLVTVDV
CCCCCHHHHHHHCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEECCEEEEEEEEH
FEHTKRNVVAHLDRAQLAWLDRTLASAERRGTDWIVVQGHVPVLKPVRIYGSSAMYYRGG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCEEEEECC
AGSAFWRTMARHHVDLYLDGEVHDISVRRRDGITQISHGGTIQMASAGGYGSTNYLLGEV
CCHHHHHHHHHHCEEEEECCCEEEEEEECCCCCCEECCCCEEEEECCCCCCCCHHHHHHH
FGDTMFLRDHRFAPKMIDFSKRLWQVGQSHRPVVRKEVWDRPLAVGHLVLTSDNQVQYSD
HCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEECCCEEEECC
GALIPLS
CCEEECC
>Mature Secondary Structure 
TQITPATFHLSPSVTETVCGTDTERPGELSVLPREMSRTAMETRRAVRTLVTALAALGV
CCCCCEEEEECCCHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH
AALLAAGVTPGADASPSTATGARTSTDRPVLYPRPVEQPLPSIGVALERPVVQPDYRFLS
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCHHHCC
SPDFMNSDIADVSKLRTWHRGLPNSWNSSYAATVDTILDTFESEAPEDVFVAGDLVEGHW
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCE
VSDDDRTGLFGPARTHAQRKAAIRRAADFYFSEWRKRFDQRGLPVYAAVGDHDIGDNPWR
ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
GGGNAEENRFKRDNVELFKASFSRKVIAPNRVPDRPRGPAHDTAYATYVDPEVLLVTVDV
CCCCCHHHHHHHCCHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEEEECCEEEEEEEEH
FEHTKRNVVAHLDRAQLAWLDRTLASAERRGTDWIVVQGHVPVLKPVRIYGSSAMYYRGG
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCEEEEECC
AGSAFWRTMARHHVDLYLDGEVHDISVRRRDGITQISHGGTIQMASAGGYGSTNYLLGEV
CCHHHHHHHHHHCEEEEECCCEEEEEEECCCCCCEECCCCEEEEECCCCCCCCHHHHHHH
FGDTMFLRDHRFAPKMIDFSKRLWQVGQSHRPVVRKEVWDRPLAVGHLVLTSDNQVQYSD
HCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEEECCCEEEECC
GALIPLS
CCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA