| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714937
Identifier: 119714937
GI number: 119714937
Start: 728993
End: 730015
Strand: Direct
Name: 119714937
Synonym: Noca_0690
Alternate gene names: NA
Gene position: 728993-730015 (Clockwise)
Preceding gene: 119714936
Following gene: 119714938
Centisome position: 14.62
GC content: 68.13
Gene sequence:
>1023_bases GTGGCCAGCTACGAGAACGCCACCGACGCCCGCGCCTGGGCCCGGCAGAACCTGAGTGGCGTGACCGGGTGCGTGATGCC CTCGTTCACGTCGGACATGTCCGGGCTCAACGAGGCAGCCATCGTCCACGACATCCACCACGAGCTCGAGCTCGGGTTCA GCGGCTTCCTCATCGTGGCCGAGTGCGGGACCACGCCCGAGGAGCTCGAACGCTTCATCGACATCTGCGTCGCGGAGAGT GGCGAGGCGATCACGATCCTCCAGGCCGCCGAGCCCACGGTGGAGGCGAACGTCGAGCTGATCCGCCGGTCCGCCCGGGC CGGCGTGGACCTGGTGATGCCGTCCTACCCGATCGGGTTCTACCCGCAGAGCGGCGAGGAGGTCGTCGCCTACACGCGAG CCCTCGCCGAGGCCAGTCACCTCGGTCTGATCGTGTTCGCGATGAACCTCTGGAACTTCGAGCGCCTGCACCCCTCCGGC TTTGCGGTCGACTGGCTGCGGCGACTCGTCGACGACGTGCCCAACGTCGTGGCGATCAAGAACGAGGTGGCCGAACCAGG CGTGGCCGGCATCGCGGACGTGTTCCGCCGGTTCGCGGACGATGTGGTCGTCGCGGACCCTCTGGAGATGAACTCCCCGG CGTGGATCACGACCTACGGCATGCGGTGGATGGGGACGTCCAACTACGAGTACTTCGGCGGCGATGTGCCCCGCTACTTC GAGCTGCTCCAGGACCCGGAGCGCTACGACGAGGCCATGGAGATCTACTGGCGGTTGCACCCGGCCCGGCAGGCGACCGG CTCGCTGATGAAGGAGGCCAACGGCGGCACCGTCTTCGTGCACCGAATGCTATGGAAGTACCAGGGCTGGCTGCAGGGCT TCAACGGCGGCCCGGTGCGGCCGCCGCACATGCGGCTCCTGGACCGGCAGATGCGCACGCTGCGTGCGGCTGCGATCGCC AGCGGCCTCGACGTCACCGACGAGCCGGACACCGAGTTCTTCCGCGGACGGATCCAGGCATGA
Upstream 100 bases:
>100_bases GCCCGGACGGCGGCCTCTCGATCGCCTGACCGGCGGTCGACCGATCCACCCCGCACCCGACTACTCCGGCGCGCTCGCGC CCCCACCGAAGGAGACCCTC
Downstream 100 bases:
>100_bases TCGAGCCGGACGCCACGAAGGTCAGGGTGGTCAGCGCCGAGGAGGTGCTGCGGCACGGCACGCCGGCGCTCGCCCTGGCC TCGGCCCGGACCGCGGCCGA
Product: dihydrodipicolinate synthase/N-acetylneuraminate lyase
Products: NA
Alternate protein names: Dihydrodipicolinate Synthase; Dihydrodipicolinate Synthase/N-Acetylneuraminate Lyase-Like
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVAECGTTPEELERFIDICVAES GEAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGFYPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSG FAVDWLRRLVDDVPNVVAIKNEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYF ELLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVRPPHMRLLDRQMRTLRAAAIA SGLDVTDEPDTEFFRGRIQA
Sequences:
>Translated_340_residues MASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVAECGTTPEELERFIDICVAES GEAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGFYPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSG FAVDWLRRLVDDVPNVVAIKNEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYF ELLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVRPPHMRLLDRQMRTLRAAAIA SGLDVTDEPDTEFFRGRIQA >Mature_339_residues ASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVAECGTTPEELERFIDICVAESG EAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGFYPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSGF AVDWLRRLVDDVPNVVAIKNEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYFE LLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVRPPHMRLLDRQMRTLRAAAIAS GLDVTDEPDTEFFRGRIQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37954; Mature: 37823
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVA CCCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE ECGTTPEELERFIDICVAESGEAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGF ECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCC YPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSGFAVDWLRRLVDDVPNVVAIK CCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHCHHHCCCCCCHHHHHHHHHHHCCCEEEEH NEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYF HHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCEEEECCCCCCCCCCCHHHHH ELLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVR HHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCC PPHMRLLDRQMRTLRAAAIASGLDVTDEPDTEFFRGRIQA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCC >Mature Secondary Structure ASYENATDARAWARQNLSGVTGCVMPSFTSDMSGLNEAAIVHDIHHELELGFSGFLIVA CCCCCCHHHHHHHHHCCCCCHHHHCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEE ECGTTPEELERFIDICVAESGEAITILQAAEPTVEANVELIRRSARAGVDLVMPSYPIGF ECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEECCCCCCCC YPQSGEEVVAYTRALAEASHLGLIVFAMNLWNFERLHPSGFAVDWLRRLVDDVPNVVAIK CCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHCHHHCCCCCCHHHHHHHHHHHCCCEEEEH NEVAEPGVAGIADVFRRFADDVVVADPLEMNSPAWITTYGMRWMGTSNYEYFGGDVPRYF HHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCEEEECCCCCCCCCCCHHHHH ELLQDPERYDEAMEIYWRLHPARQATGSLMKEANGGTVFVHRMLWKYQGWLQGFNGGPVR HHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCC PPHMRLLDRQMRTLRAAAIASGLDVTDEPDTEFFRGRIQA CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA