| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714924
Identifier: 119714924
GI number: 119714924
Start: 715651
End: 716163
Strand: Direct
Name: 119714924
Synonym: Noca_0676
Alternate gene names: NA
Gene position: 715651-716163 (Clockwise)
Preceding gene: 119714920
Following gene: 119714930
Centisome position: 14.35
GC content: 70.96
Gene sequence:
>513_bases GTGGGACGTCTCTCCCGGCGCGGCCGCGAGCTGCCGTGCTTCGGGACGACCGGGCACTTCCACGCCGCCCAGGTCCGTCT GGACCGGAGCGAACGGCTCGACGGCCCGCCGGACCTGACGACCGAGCGGATCGCCGCCGGCGTCGGACACGGGCAACGCG TGGTCGTCGCCGACGGGACGGTGCTGTCATTGTCATTCGACCCGCTGGGTGTCTACCGCCTGCTTGCCCTGATCGACGAC CCGACGGAGCCCTCGGCGTTCGCCGCCGAGGCGCTCGGGCCGTCGGCCACCGCTCCATCGCCCGAGCACGACAATCTCCA CCGGACACTCAGGGTGCTCCTGGACACCGGGATGAGCGTGGCCGAGAGCGCGCGCCTGCTGCACTTCCGCTACAACACCT TGCGCTACCGGATCACCCGCATCGAGTCGCTCGTGGGTCCGTTCACCGCCGACGCTCAGCTCCGGCTGCGGATCCTCCTG GCCCTCCAGGTGCTGGACATGCGCGGGGTATGA
Upstream 100 bases:
>100_bases CCGCCAGCCCGGCCAGCTCCGCCGGGTTGATGAAGTCCATCTCCCACGCGACGGCCGGGAAGAGGCCGAGGCCGGCCCGG ACCCGCTCGATGATGCCCGG
Downstream 100 bases:
>100_bases GGCAGGTGCCTCTGGGCCGGTCGAGCTCAGCCGGTCTGCAGCGAACGGGCCACCTCGCGAGCCCGAGCCGCCAGCTCTGC CGGGTCGGCGTTCACCAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: PucR Family Transcriptional Regulator; Transcriptional Regulator CdaR; Transcriptional Regulator; Purine Catabolism Regulatory Protein; Transcriptional Regulator PucR Family; Purine Catabolism PurC Domain-Containing Protein; Purine Catabolism Regulator-Like Protein
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MGRLSRRGRELPCFGTTGHFHAAQVRLDRSERLDGPPDLTTERIAAGVGHGQRVVVADGTVLSLSFDPLGVYRLLALIDD PTEPSAFAAEALGPSATAPSPEHDNLHRTLRVLLDTGMSVAESARLLHFRYNTLRYRITRIESLVGPFTADAQLRLRILL ALQVLDMRGV
Sequences:
>Translated_170_residues MGRLSRRGRELPCFGTTGHFHAAQVRLDRSERLDGPPDLTTERIAAGVGHGQRVVVADGTVLSLSFDPLGVYRLLALIDD PTEPSAFAAEALGPSATAPSPEHDNLHRTLRVLLDTGMSVAESARLLHFRYNTLRYRITRIESLVGPFTADAQLRLRILL ALQVLDMRGV >Mature_169_residues GRLSRRGRELPCFGTTGHFHAAQVRLDRSERLDGPPDLTTERIAAGVGHGQRVVVADGTVLSLSFDPLGVYRLLALIDDP TEPSAFAAEALGPSATAPSPEHDNLHRTLRVLLDTGMSVAESARLLHFRYNTLRYRITRIESLVGPFTADAQLRLRILLA LQVLDMRGV
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18634; Mature: 18502
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLSRRGRELPCFGTTGHFHAAQVRLDRSERLDGPPDLTTERIAAGVGHGQRVVVADGT CCCCCCCCCCCCEECCCCCCEEEEEEECHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCE VLSLSFDPLGVYRLLALIDDPTEPSAFAAEALGPSATAPSPEHDNLHRTLRVLLDTGMSV EEEEECCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCH AESARLLHFRYNTLRYRITRIESLVGPFTADAQLRLRILLALQVLDMRGV HHHHHHHEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GRLSRRGRELPCFGTTGHFHAAQVRLDRSERLDGPPDLTTERIAAGVGHGQRVVVADGT CCCCCCCCCCCEECCCCCCEEEEEEECHHHCCCCCCCCCHHHHHHCCCCCCEEEEECCE VLSLSFDPLGVYRLLALIDDPTEPSAFAAEALGPSATAPSPEHDNLHRTLRVLLDTGMSV EEEEECCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCH AESARLLHFRYNTLRYRITRIESLVGPFTADAQLRLRILLALQVLDMRGV HHHHHHHEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA