| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
Click here to switch to the map view.
The map label for this gene is ppx [C]
Identifier: 119714739
GI number: 119714739
Start: 506536
End: 507471
Strand: Direct
Name: ppx [C]
Synonym: Noca_0475
Alternate gene names: 119714739
Gene position: 506536-507471 (Clockwise)
Preceding gene: 119714735
Following gene: 119714740
Centisome position: 10.16
GC content: 73.93
Gene sequence:
>936_bases ATGCGGCTGGGCGTCCTCGACATCGGGTCCAACACCGGACACCTGCTCGTCGTCGACGCCCACGGGGGCGCCGCGCCGCT GCCGGCGTACTCCTACAAGCAGCCGTTGCGCCTCGCCGAGCACCTCGACGACGAGGGAGCGGTCACCCGGCTCGGGGTCG ATTCGCTGACGGCGTTCACCGCGCAGGCCCTGGTGGTCGCGGAGGACAAGGGCTGCCAGGACATGCTCGCGTTCGCGACG TCCGCGGTGCGCGACGCGGTCAACACCGATGCGGTGCTCGACCACGTGCACGCGGCGACCGGCGTGCGGATCGAGGTGCT CCCCGGGGAGGACGAGGCCCGGCTGACCTTCCTCGCCGTACGACGGTGGTTCGGCTGGTCCGCCGGGCGGCTGGCCGTCT TCGACATCGGTGGCGGCTCGCTGGAGATCGCCGGCGGCGCCGACGAGTCGCCCGACGTCGCCTGGTCGCTGCCGATCGGA GCCGGCCGCCTGGCGCGGCAGTTCTTCAGCGGGGGGCCGCCCGACGACGAGGCGATCCGTGGGCTGCGCAAGCAGCTTCG TGCCGAGATCGCCCGCGACGCGGGGCACCTGCTGCGGGCGGGGACGCCGGACCACGCGGCGGCCACGTCCAAGACGTTCC GCTCGCTGGCCCGGATCTGTGGGGCCGCGCCGTCGGCGGACGGTCCCCTGGTCCCGCGGGTCCTGGAGCGCGAGGTGCTG CGCGAGTGGATCCCGAAGCTGGTCACGATGGCCCCGGAGGCGCTGGCGCACCTCCCGGGCGTCTCCCCGAGCCGGGCCCA CCAGATCGTGACCGGCGCGCTCGTGGCCGAGGCGGCGATGGACATCTTCGGGCTCGAGCTCCTGGAGGTCTGCCCCTGGG CCCTGCGGGAGGGCGTGATCCTCGAACGGCTCGACCAGATCAGCGTGCTCGGCTAG
Upstream 100 bases:
>100_bases CTCCACGTAGGCGCGGGGGAAGACCAGATCGACTTCGGGCACCCGTCAACCCTACGTGCCGTCCGGGGCCGTCCCCGCCG CCGTTGGGTACGTTGGACCC
Downstream 100 bases:
>100_bases CCATGGCCCCACGCGTCGGACTCTCCACCGTCTCGGTCTACCCCGAGTCCTCCGCCCATGCCTTCGCCTACGCGAGTGCG CTCGGTTACGACACCATCGA
Product: Ppx/GppA phosphatase
Products: polyphosphate; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRLGVLDIGSNTGHLLVVDAHGGAAPLPAYSYKQPLRLAEHLDDEGAVTRLGVDSLTAFTAQALVVAEDKGCQDMLAFAT SAVRDAVNTDAVLDHVHAATGVRIEVLPGEDEARLTFLAVRRWFGWSAGRLAVFDIGGGSLEIAGGADESPDVAWSLPIG AGRLARQFFSGGPPDDEAIRGLRKQLRAEIARDAGHLLRAGTPDHAAATSKTFRSLARICGAAPSADGPLVPRVLEREVL REWIPKLVTMAPEALAHLPGVSPSRAHQIVTGALVAEAAMDIFGLELLEVCPWALREGVILERLDQISVLG
Sequences:
>Translated_311_residues MRLGVLDIGSNTGHLLVVDAHGGAAPLPAYSYKQPLRLAEHLDDEGAVTRLGVDSLTAFTAQALVVAEDKGCQDMLAFAT SAVRDAVNTDAVLDHVHAATGVRIEVLPGEDEARLTFLAVRRWFGWSAGRLAVFDIGGGSLEIAGGADESPDVAWSLPIG AGRLARQFFSGGPPDDEAIRGLRKQLRAEIARDAGHLLRAGTPDHAAATSKTFRSLARICGAAPSADGPLVPRVLEREVL REWIPKLVTMAPEALAHLPGVSPSRAHQIVTGALVAEAAMDIFGLELLEVCPWALREGVILERLDQISVLG >Mature_311_residues MRLGVLDIGSNTGHLLVVDAHGGAAPLPAYSYKQPLRLAEHLDDEGAVTRLGVDSLTAFTAQALVVAEDKGCQDMLAFAT SAVRDAVNTDAVLDHVHAATGVRIEVLPGEDEARLTFLAVRRWFGWSAGRLAVFDIGGGSLEIAGGADESPDVAWSLPIG AGRLARQFFSGGPPDDEAIRGLRKQLRAEIARDAGHLLRAGTPDHAAATSKTFRSLARICGAAPSADGPLVPRVLEREVL REWIPKLVTMAPEALAHLPGVSPSRAHQIVTGALVAEAAMDIFGLELLEVCPWALREGVILERLDQISVLG
Specific function: Degradation Of Inorganic Polyphosphates. Orthophosphate Is Released Progressively From The Ends Of Polyphosphate Of Circa 500 Residues Long, While Chains Of Circa 15 Residues Compete Poorly With Polyphosphate As Substrate. [C]
COG id: COG0248
COG function: function code FP; Exopolyphosphatase
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gppA/ppx family [H]
Homologues:
Organism=Escherichia coli, GI1788848, Length=308, Percent_Identity=26.9480519480519, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003695 [H]
Pfam domain/function: PF02541 Ppx-GppA [H]
EC number: 3.6.1.11 [C]
Molecular weight: Translated: 32896; Mature: 32896
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLGVLDIGSNTGHLLVVDAHGGAAPLPAYSYKQPLRLAEHLDDEGAVTRLGVDSLTAFT CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHH AQALVVAEDKGCQDMLAFATSAVRDAVNTDAVLDHVHAATGVRIEVLPGEDEARLTFLAV HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH RRWFGWSAGRLAVFDIGGGSLEIAGGADESPDVAWSLPIGAGRLARQFFSGGPPDDEAIR HHHHCCCCCCEEEEEECCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHH GLRKQLRAEIARDAGHLLRAGTPDHAAATSKTFRSLARICGAAPSADGPLVPRVLEREVL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH REWIPKLVTMAPEALAHLPGVSPSRAHQIVTGALVAEAAMDIFGLELLEVCPWALREGVI HHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHH LERLDQISVLG HHHHHHHHCCC >Mature Secondary Structure MRLGVLDIGSNTGHLLVVDAHGGAAPLPAYSYKQPLRLAEHLDDEGAVTRLGVDSLTAFT CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECHHHHHHHH AQALVVAEDKGCQDMLAFATSAVRDAVNTDAVLDHVHAATGVRIEVLPGEDEARLTFLAV HHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH RRWFGWSAGRLAVFDIGGGSLEIAGGADESPDVAWSLPIGAGRLARQFFSGGPPDDEAIR HHHHCCCCCCEEEEEECCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCHHHHH GLRKQLRAEIARDAGHLLRAGTPDHAAATSKTFRSLARICGAAPSADGPLVPRVLEREVL HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH REWIPKLVTMAPEALAHLPGVSPSRAHQIVTGALVAEAAMDIFGLELLEVCPWALREGVI HHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCHH LERLDQISVLG HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Polyphosphate; H2O [C]
Specific reaction: (Polyphosphate)n + H2O = (polyphosphate)n + phosphate [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]