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The map label for this gene is aglR [H]

Identifier: 119714735

GI number: 119714735

Start: 503013

End: 504032

Strand: Direct

Name: aglR [H]

Synonym: Noca_0471

Alternate gene names: 119714735

Gene position: 503013-504032 (Clockwise)

Preceding gene: 119714732

Following gene: 119714739

Centisome position: 10.09

GC content: 74.61

Gene sequence:

>1020_bases
GTGGCGCGGGTCTCGACGACCCCGCCGACCCTGGCCGACGTCGCCGAGCGCGCCGGCGTCTCCCGGCAGACGGTGTCGAA
CGCCGTGAACAACCCCGACCTGCTGCGCGCCGACACCCTGGCCCGGGTGCTGCACGCGATCGACGAGCTCGGCTACTCGC
CCAACCGGGCCGCCCGCAACCTGCGCACCCGCGCCAGCCACCTGGTCGGGATGCGGATCGGGCCGGTCTACGAGGGCACG
GCCAACGCCACGATGGACCGGTTCGTGCACTCCCTGGTGGAGGCCTCGCGCGAGGCGGGCTACCACGTCCTGCTGTTCGC
GGGTGACCCCGAGGACCCGGTGGCCGGGTACGACGACCTGCTCCGCTCCACCACCGTCGACGCGTTCGTCGTCACCGACA
CCTACCTCGGCAATCCGCAGGCCACCTGGCTCGAGGAGCGGCGGGCCCCGTTCGTCGCGTTCGGACGGCCGTGGGACAAC
CCGGCGGCCGAGCACCCCTGGGTCGACGTGGACGGCGCGGCCGGCACCGACCTGGCGACGTCGTACCTCCTCGGCCGCGG
CCACGAGCGGATCGCCTGGATCGGCTGGCGCAAGGACTCCTGGATCGGTGAGGACCGCCGCTCGGGATGGAGCCGCGCCC
TGCACGCCCGCGGGCTGCCCACCACCGGCCTGGCGTCGCGGGTCGAGGACACCGTCTCGAGCGGCCGCGAGGCGAGCGCC
GTCCTGCTGGACGAGGCCCGGCCCACCGCGTTCGTGTGCGCGTCCGACACCCTCGCCATGGGGGTGCTCGGCACCCTCGC
CGACCGCGGCCTGACGCCCGGTCGGGACGTGTCGGTGATCGGCTTCGACGACTCGCAGGTCGCGCAGGTCGTCTCGCCCG
GCCTCACCTCGGTGCGCCAGCCGCTCGAGGAAGTGGCCGTGGAGATCGTCAAGGCGCTCGAGGGCCTGCTCGGCCACCCG
CCCACCGTCGGCCCCGGCGTGATGCTGGTCCCGAGCCTCGCCCTCCGCGGCACCAGCTGA

Upstream 100 bases:

>100_bases
GGGCCGACGAAAGTTATGCTGACCTTGGAACGATCAAGGCGATCCCCGTCAGTCGAGGGAGGTGGGGTTGTCCAGGACGT
CGGCCGGGACGAGCGGACGG

Downstream 100 bases:

>100_bases
GGTCGCGAGCCGTGACGGTTTCCCCGGTTCACCGGGGATGTTGGAACTTCTGGCCCGAAACTTCGGCCCAACAGTTCCGG
TTTCCCCGGGTACCCGGGGA

Product: LacI family transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MARVSTTPPTLADVAERAGVSRQTVSNAVNNPDLLRADTLARVLHAIDELGYSPNRAARNLRTRASHLVGMRIGPVYEGT
ANATMDRFVHSLVEASREAGYHVLLFAGDPEDPVAGYDDLLRSTTVDAFVVTDTYLGNPQATWLEERRAPFVAFGRPWDN
PAAEHPWVDVDGAAGTDLATSYLLGRGHERIAWIGWRKDSWIGEDRRSGWSRALHARGLPTTGLASRVEDTVSSGREASA
VLLDEARPTAFVCASDTLAMGVLGTLADRGLTPGRDVSVIGFDDSQVAQVVSPGLTSVRQPLEEVAVEIVKALEGLLGHP
PTVGPGVMLVPSLALRGTS

Sequences:

>Translated_339_residues
MARVSTTPPTLADVAERAGVSRQTVSNAVNNPDLLRADTLARVLHAIDELGYSPNRAARNLRTRASHLVGMRIGPVYEGT
ANATMDRFVHSLVEASREAGYHVLLFAGDPEDPVAGYDDLLRSTTVDAFVVTDTYLGNPQATWLEERRAPFVAFGRPWDN
PAAEHPWVDVDGAAGTDLATSYLLGRGHERIAWIGWRKDSWIGEDRRSGWSRALHARGLPTTGLASRVEDTVSSGREASA
VLLDEARPTAFVCASDTLAMGVLGTLADRGLTPGRDVSVIGFDDSQVAQVVSPGLTSVRQPLEEVAVEIVKALEGLLGHP
PTVGPGVMLVPSLALRGTS
>Mature_338_residues
ARVSTTPPTLADVAERAGVSRQTVSNAVNNPDLLRADTLARVLHAIDELGYSPNRAARNLRTRASHLVGMRIGPVYEGTA
NATMDRFVHSLVEASREAGYHVLLFAGDPEDPVAGYDDLLRSTTVDAFVVTDTYLGNPQATWLEERRAPFVAFGRPWDNP
AAEHPWVDVDGAAGTDLATSYLLGRGHERIAWIGWRKDSWIGEDRRSGWSRALHARGLPTTGLASRVEDTVSSGREASAV
LLDEARPTAFVCASDTLAMGVLGTLADRGLTPGRDVSVIGFDDSQVAQVVSPGLTSVRQPLEEVAVEIVKALEGLLGHPP
TVGPGVMLVPSLALRGTS

Specific function: Probable regulatory protein for the binding-protein- dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose [H]

COG id: COG1609

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790194, Length=343, Percent_Identity=29.1545189504373, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1790369, Length=345, Percent_Identity=28.9855072463768, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1789068, Length=335, Percent_Identity=28.955223880597, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1789202, Length=308, Percent_Identity=31.8181818181818, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1787948, Length=297, Percent_Identity=28.956228956229, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788474, Length=323, Percent_Identity=30.3405572755418, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1786540, Length=312, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI48994940, Length=308, Percent_Identity=27.5974025974026, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1787580, Length=326, Percent_Identity=23.6196319018405, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1787906, Length=334, Percent_Identity=27.2455089820359, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1790715, Length=296, Percent_Identity=23.9864864864865, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 36244; Mature: 36113

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVSTTPPTLADVAERAGVSRQTVSNAVNNPDLLRADTLARVLHAIDELGYSPNRAARN
CCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
LRTRASHLVGMRIGPVYEGTANATMDRFVHSLVEASREAGYHVLLFAGDPEDPVAGYDDL
HHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH
LRSTTVDAFVVTDTYLGNPQATWLEERRAPFVAFGRPWDNPAAEHPWVDVDGAAGTDLAT
HHHHCCCEEEEEEEECCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCEECCCCCCCHHHH
SYLLGRGHERIAWIGWRKDSWIGEDRRSGWSRALHARGLPTTGLASRVEDTVSSGREASA
HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
VLLDEARPTAFVCASDTLAMGVLGTLADRGLTPGRDVSVIGFDDSQVAQVVSPGLTSVRQ
EEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHH
PLEEVAVEIVKALEGLLGHPPTVGPGVMLVPSLALRGTS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
ARVSTTPPTLADVAERAGVSRQTVSNAVNNPDLLRADTLARVLHAIDELGYSPNRAARN
CCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHH
LRTRASHLVGMRIGPVYEGTANATMDRFVHSLVEASREAGYHVLLFAGDPEDPVAGYDDL
HHHHHHHHHHCEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH
LRSTTVDAFVVTDTYLGNPQATWLEERRAPFVAFGRPWDNPAAEHPWVDVDGAAGTDLAT
HHHHCCCEEEEEEEECCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCEECCCCCCCHHHH
SYLLGRGHERIAWIGWRKDSWIGEDRRSGWSRALHARGLPTTGLASRVEDTVSSGREASA
HHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEE
VLLDEARPTAFVCASDTLAMGVLGTLADRGLTPGRDVSVIGFDDSQVAQVVSPGLTSVRQ
EEEECCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHCCCHHHHHH
PLEEVAVEIVKALEGLLGHPPTVGPGVMLVPSLALRGTS
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]