| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714732
Identifier: 119714732
GI number: 119714732
Start: 499269
End: 500069
Strand: Direct
Name: 119714732
Synonym: Noca_0468
Alternate gene names: NA
Gene position: 499269-500069 (Clockwise)
Preceding gene: 119714730
Following gene: 119714735
Centisome position: 10.01
GC content: 74.41
Gene sequence:
>801_bases ATGCCCGCCCTCACCCGTGGCCCGCTGCCCGCGCGCGTCTACTGGGTACGTCGGCTGCTCGTGCTCGGCACCGCAACCCT GCTCGTCGTGGCGATCGCCCGGCTCCTCGGCGGCGGCAGCGACGCCGCCTCGGAACCTGACGCCGGGGCGCAGCTGGTCG CGGACGGCTCCCCGACCGCAGCGGCGACGCTCGACGGCGAGCCGACGACCACGACGTCGGCCCGAAAGCCCGGCAAGCGC GCCTCGAAGAGCCAGGAGCCGGTGCTCGCCCAGCCCGACGGACCGTGCGCGGACGAGGACGTGGCGATCACCCCGAAGGT CGAGAACGCCGTCGCCGGGCGGCCGGTCCAGATCGTGCTGCAGCTGCGCACCCTCGAGTCCGACGCCTGCACGTGGCGGG TCTCGGCGGGCACCGTGACGGTCAACATCACCTCTGGCCCCGACGACATCTGGACCAGCCGCCAGTGCCGGCGGGCGATC CCGGCCCGGGACGTGGTCGTGCGCAAGGCCGTCACGAGCAACGTCTCGATCACCTGGAGCTCGCGCCGCTCGGACGACGG CTGCACCCGGCTCACCGACTGGGCCTACCCCGGCTGGTACCACGTCACCGCCGCCGCGCTGGCCGGCGAGCCCTCGGACG CACAGTTCGAGCTGCGGACGCCGACGGCCGCGACGATCACGAAGACCGTGACGCCTACCCAGAAGCCCAGCCAGAAGCCC AGCCAGAGCGCCAGCGGCCGGCCGGTCACCCCGGGGCAGGGGCAGAGCGCCTCGCCGTCCGGGGCCGTCGAGCCGAACTG A
Upstream 100 bases:
>100_bases GTACCACTGCAGCACGGGTGCATGGAGCTCGTTCATGTCCGGGCCATTGTCGCCGGTGTGGCACCACCACCGGCGCCGCC CCCGTGACTAGCGTTGCGTC
Downstream 100 bases:
>100_bases GCTCCCGCCCCGAGGTTGCCTTTCGGCTCACCGGGTCTCGACACGCCGGTCGCGACCTCGTTCCTCGGTCGCGCGGCTCG CTCGACCACCATCAGAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 265
Protein sequence:
>266_residues MPALTRGPLPARVYWVRRLLVLGTATLLVVAIARLLGGGSDAASEPDAGAQLVADGSPTAAATLDGEPTTTTSARKPGKR ASKSQEPVLAQPDGPCADEDVAITPKVENAVAGRPVQIVLQLRTLESDACTWRVSAGTVTVNITSGPDDIWTSRQCRRAI PARDVVVRKAVTSNVSITWSSRRSDDGCTRLTDWAYPGWYHVTAAALAGEPSDAQFELRTPTAATITKTVTPTQKPSQKP SQSASGRPVTPGQGQSASPSGAVEPN
Sequences:
>Translated_266_residues MPALTRGPLPARVYWVRRLLVLGTATLLVVAIARLLGGGSDAASEPDAGAQLVADGSPTAAATLDGEPTTTTSARKPGKR ASKSQEPVLAQPDGPCADEDVAITPKVENAVAGRPVQIVLQLRTLESDACTWRVSAGTVTVNITSGPDDIWTSRQCRRAI PARDVVVRKAVTSNVSITWSSRRSDDGCTRLTDWAYPGWYHVTAAALAGEPSDAQFELRTPTAATITKTVTPTQKPSQKP SQSASGRPVTPGQGQSASPSGAVEPN >Mature_265_residues PALTRGPLPARVYWVRRLLVLGTATLLVVAIARLLGGGSDAASEPDAGAQLVADGSPTAAATLDGEPTTTTSARKPGKRA SKSQEPVLAQPDGPCADEDVAITPKVENAVAGRPVQIVLQLRTLESDACTWRVSAGTVTVNITSGPDDIWTSRQCRRAIP ARDVVVRKAVTSNVSITWSSRRSDDGCTRLTDWAYPGWYHVTAAALAGEPSDAQFELRTPTAATITKTVTPTQKPSQKPS QSASGRPVTPGQGQSASPSGAVEPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27771; Mature: 27640
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALTRGPLPARVYWVRRLLVLGTATLLVVAIARLLGGGSDAASEPDAGAQLVADGSPTA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCE AATLDGEPTTTTSARKPGKRASKSQEPVLAQPDGPCADEDVAITPKVENAVAGRPVQIVL EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCHHHCCCCEEEEE QLRTLESDACTWRVSAGTVTVNITSGPDDIWTSRQCRRAIPARDVVVRKAVTSNVSITWS EEEECCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEC SRRSDDGCTRLTDWAYPGWYHVTAAALAGEPSDAQFELRTPTAATITKTVTPTQKPSQKP CCCCCCCCCCCCCCCCCCCHHEEHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCC SQSASGRPVTPGQGQSASPSGAVEPN CCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PALTRGPLPARVYWVRRLLVLGTATLLVVAIARLLGGGSDAASEPDAGAQLVADGSPTA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCE AATLDGEPTTTTSARKPGKRASKSQEPVLAQPDGPCADEDVAITPKVENAVAGRPVQIVL EEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEECCCCCHHHCCCCEEEEE QLRTLESDACTWRVSAGTVTVNITSGPDDIWTSRQCRRAIPARDVVVRKAVTSNVSITWS EEEECCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEEC SRRSDDGCTRLTDWAYPGWYHVTAAALAGEPSDAQFELRTPTAATITKTVTPTQKPSQKP CCCCCCCCCCCCCCCCCCCHHEEHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCC SQSASGRPVTPGQGQSASPSGAVEPN CCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA