Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714638

Identifier: 119714638

GI number: 119714638

Start: 399342

End: 400832

Strand: Reverse

Name: 119714638

Synonym: Noca_0373

Alternate gene names: NA

Gene position: 400832-399342 (Counterclockwise)

Preceding gene: 119714640

Following gene: 119714635

Centisome position: 8.04

GC content: 69.28

Gene sequence:

>1491_bases
ATGCACAGAATCACTCGCGCCCTCGGCGCGTCCGTCGTCGCCGCACTGGTCATGAGCGGACCCAGCGTCGCGGTCGCGGC
CCCGTCCCAGGGAGGTGAACCGCCGTCCTCGTCCAGTGCCCAACGGGCAGGTGAGCCGACGCTTTCCGGCTCGGGCGTCG
CCGGACAGCCGCTCACCGTGCTGATCGACGGCCTGACGACGCTGCTTCCTGTGCAGTGGCTGCGCGACGGGAGCCCGATC
GCAGGGGCGACCGGCGCCTCGTACGTCCCCGATGTCACCGACATCGGGCACCAGATCAGCGCACTGGTAGACGTGCCGCT
TCTCGGCGGAATCCCGACCCCGTCCATCACGATCCTCGCGCCGGACGGCGGGCTCCCAGATCTGTTGACGCCGCCGGAGC
TGACCGGGACACCTGTGGTCGGTGAGCTCCTGACCGTCCTTGCGCCGGTGTTCAGCGTGCCTGGGGTCGAGACCACGTAC
CAGTGGCTGCGCGACGGCGTGCCCATCCCGGGGGAGACGGGAGGCACGTACGCGCCGAGCCTGGAGGACGTTGGGCACGA
GATCTCGGTGGGTGTGACGAGCACGTTGGCGGGCCTGCCCGTGCTGTCGACCGTCACCAACATCCTGCCGATCTCCGCCA
TCGGTGAGGAGTCCCTGTCTGCGACCGCGGCGCCCACCGTTTCCGGGACCGCGAGAATCGGGAAGGTCCTGTCCGTCTCC
GGCACCCAGTGGAACCAGGACGGCGTCACGACGACCTACCAATGGCTGCGGGACGGCGTGCCTATCAACGGCGCCACGGC
AACCAGCTACAAGCTCGTGCCGGACGACCTCGACTCCGCCATCTCGGCCAAGGCCACCGGGACGAAGGACGGGTTCACCA
ATGGGGTCGTGACGAGCGACAGCAAGACCGCACTGATCGGCGATCCGATCACCTGGACCAGGCAGCCCGCAGTCAGCGGC
ACCGCGAAGGTCGGCCGGCTGCTGACCGCAGACCCGGGCGCATGGGGGACCGGCGACACACCCCTGTTCGGCTACCAGTG
GAAGCGCAACGGCGTCGCCATTGCGGGAGCCGTCGCCCAGACCTACCAGATCGACACGGCCGACTTCGGCCGGAGCCTCA
CGGTGACCATCACCGCGGCCCGCGCGGGCTACCAGCCCGGCACGTTCACCACCTCGAAGGTCGCGGTCGCCAAGCGCGCC
GCCGTGCTGCGGGCCACCCTCGCGACGAAGACGATCGCCAAGAGCCAGCGCGGGGTGCTCGCCCTGGTCCTGAAGGTCGC
CGGGGTCACCTCGCCGACCGGTCGGGTGAAGGTCCTGGACGGCAGGAAGGTCGTCTCGAAGCTCAAGTTCGTGTCCGGGA
AGAAGGGGAAGGCGACCGTGCGGCTGCCTCGGCTCAAGCCGGGCGTGCACAAGCTGAAGGCCGTGTACGCCGGAACCGCC
ACGATCTCCGGCGCCAGGTCCAAGGTGGTGAAGCTGACCGTCAAGAAGTAG

Upstream 100 bases:

>100_bases
CATCCACCGCGAACCGTGGTCCTCGGGACCTTGGTCCCTTTACATTCCGACCACGGCGGCCCTTCGGGAGGGAGGGCCGA
CTGGGGAGGGGACTGGCTCG

Downstream 100 bases:

>100_bases
CCCGAGACGACGTCGACCCGCCCGAAGGCTTCGGGCGGGTCGACGTCATTTCAGGGCTGCGAGGCTAGTGCTGCTGGGGC
GCCTCGAACTGCTGGGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Serine Protease; Ig Domain Family; S-Layer Domain-Containing Protein; Hemagglutinin/Hemolysin-Related Protein; CHAP Domain-Containing Protein

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MHRITRALGASVVAALVMSGPSVAVAAPSQGGEPPSSSSAQRAGEPTLSGSGVAGQPLTVLIDGLTTLLPVQWLRDGSPI
AGATGASYVPDVTDIGHQISALVDVPLLGGIPTPSITILAPDGGLPDLLTPPELTGTPVVGELLTVLAPVFSVPGVETTY
QWLRDGVPIPGETGGTYAPSLEDVGHEISVGVTSTLAGLPVLSTVTNILPISAIGEESLSATAAPTVSGTARIGKVLSVS
GTQWNQDGVTTTYQWLRDGVPINGATATSYKLVPDDLDSAISAKATGTKDGFTNGVVTSDSKTALIGDPITWTRQPAVSG
TAKVGRLLTADPGAWGTGDTPLFGYQWKRNGVAIAGAVAQTYQIDTADFGRSLTVTITAARAGYQPGTFTTSKVAVAKRA
AVLRATLATKTIAKSQRGVLALVLKVAGVTSPTGRVKVLDGRKVVSKLKFVSGKKGKATVRLPRLKPGVHKLKAVYAGTA
TISGARSKVVKLTVKK

Sequences:

>Translated_496_residues
MHRITRALGASVVAALVMSGPSVAVAAPSQGGEPPSSSSAQRAGEPTLSGSGVAGQPLTVLIDGLTTLLPVQWLRDGSPI
AGATGASYVPDVTDIGHQISALVDVPLLGGIPTPSITILAPDGGLPDLLTPPELTGTPVVGELLTVLAPVFSVPGVETTY
QWLRDGVPIPGETGGTYAPSLEDVGHEISVGVTSTLAGLPVLSTVTNILPISAIGEESLSATAAPTVSGTARIGKVLSVS
GTQWNQDGVTTTYQWLRDGVPINGATATSYKLVPDDLDSAISAKATGTKDGFTNGVVTSDSKTALIGDPITWTRQPAVSG
TAKVGRLLTADPGAWGTGDTPLFGYQWKRNGVAIAGAVAQTYQIDTADFGRSLTVTITAARAGYQPGTFTTSKVAVAKRA
AVLRATLATKTIAKSQRGVLALVLKVAGVTSPTGRVKVLDGRKVVSKLKFVSGKKGKATVRLPRLKPGVHKLKAVYAGTA
TISGARSKVVKLTVKK
>Mature_496_residues
MHRITRALGASVVAALVMSGPSVAVAAPSQGGEPPSSSSAQRAGEPTLSGSGVAGQPLTVLIDGLTTLLPVQWLRDGSPI
AGATGASYVPDVTDIGHQISALVDVPLLGGIPTPSITILAPDGGLPDLLTPPELTGTPVVGELLTVLAPVFSVPGVETTY
QWLRDGVPIPGETGGTYAPSLEDVGHEISVGVTSTLAGLPVLSTVTNILPISAIGEESLSATAAPTVSGTARIGKVLSVS
GTQWNQDGVTTTYQWLRDGVPINGATATSYKLVPDDLDSAISAKATGTKDGFTNGVVTSDSKTALIGDPITWTRQPAVSG
TAKVGRLLTADPGAWGTGDTPLFGYQWKRNGVAIAGAVAQTYQIDTADFGRSLTVTITAARAGYQPGTFTTSKVAVAKRA
AVLRATLATKTIAKSQRGVLALVLKVAGVTSPTGRVKVLDGRKVVSKLKFVSGKKGKATVRLPRLKPGVHKLKAVYAGTA
TISGARSKVVKLTVKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50507; Mature: 50507

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRITRALGASVVAALVMSGPSVAVAAPSQGGEPPSSSSAQRAGEPTLSGSGVAGQPLTV
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHH
LIDGLTTLLPVQWLRDGSPIAGATGASYVPDVTDIGHQISALVDVPLLGGIPTPSITILA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
PDGGLPDLLTPPELTGTPVVGELLTVLAPVFSVPGVETTYQWLRDGVPIPGETGGTYAPS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
LEDVGHEISVGVTSTLAGLPVLSTVTNILPISAIGEESLSATAAPTVSGTARIGKVLSVS
HHHCCCEEEECHHHHHHCCHHHHHHHHHCCCHHCCCHHCCCCCCCCCCCHHHHCEEEEEC
GTQWNQDGVTTTYQWLRDGVPINGATATSYKLVPDDLDSAISAKATGTKDGFTNGVVTSD
CCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCEEECC
SKTALIGDPITWTRQPAVSGTAKVGRLLTADPGAWGTGDTPLFGYQWKRNGVAIAGAVAQ
CCEEEECCCCCCCCCCCCCCHHHHCEEEECCCCCCCCCCCCEECEEECCCCEEEEEEEEH
TYQIDTADFGRSLTVTITAARAGYQPGTFTTSKVAVAKRAAVLRATLATKTIAKSQRGVL
EEEECHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ALVLKVAGVTSPTGRVKVLDGRKVVSKLKFVSGKKGKATVRLPRLKPGVHKLKAVYAGTA
HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCE
TISGARSKVVKLTVKK
EECCCCCEEEEEEECC
>Mature Secondary Structure
MHRITRALGASVVAALVMSGPSVAVAAPSQGGEPPSSSSAQRAGEPTLSGSGVAGQPLTV
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHH
LIDGLTTLLPVQWLRDGSPIAGATGASYVPDVTDIGHQISALVDVPLLGGIPTPSITILA
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
PDGGLPDLLTPPELTGTPVVGELLTVLAPVFSVPGVETTYQWLRDGVPIPGETGGTYAPS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
LEDVGHEISVGVTSTLAGLPVLSTVTNILPISAIGEESLSATAAPTVSGTARIGKVLSVS
HHHCCCEEEECHHHHHHCCHHHHHHHHHCCCHHCCCHHCCCCCCCCCCCHHHHCEEEEEC
GTQWNQDGVTTTYQWLRDGVPINGATATSYKLVPDDLDSAISAKATGTKDGFTNGVVTSD
CCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCEEECC
SKTALIGDPITWTRQPAVSGTAKVGRLLTADPGAWGTGDTPLFGYQWKRNGVAIAGAVAQ
CCEEEECCCCCCCCCCCCCCHHHHCEEEECCCCCCCCCCCCEECEEECCCCEEEEEEEEH
TYQIDTADFGRSLTVTITAARAGYQPGTFTTSKVAVAKRAAVLRATLATKTIAKSQRGVL
EEEECHHHCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ALVLKVAGVTSPTGRVKVLDGRKVVSKLKFVSGKKGKATVRLPRLKPGVHKLKAVYAGTA
HHHHHHHCCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHCCCE
TISGARSKVVKLTVKK
EECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA