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The map label for this gene is yprA [H]

Identifier: 119714635

GI number: 119714635

Start: 393742

End: 396078

Strand: Reverse

Name: yprA [H]

Synonym: Noca_0370

Alternate gene names: 119714635

Gene position: 396078-393742 (Counterclockwise)

Preceding gene: 119714638

Following gene: 119714634

Centisome position: 7.94

GC content: 75.4

Gene sequence:

>2337_bases
GTGAGAGCGGTCCTCGGTTCGCAGGCGCGCACCGCCGGTGACCTCCGCGACGTGGTCGAGCGGCTCGTGGCCGCGCCGGG
CCGCGAGGACCGGCTGTGCCACCTGGAGGTGCTCCCGGCGCGGGCGGCGCGCCACGCGGACTGGCCCGCCTGGGCGGACC
CGGACGTGGTCGCGGCGTTCGCGGCGCGCGGGGTCGCGCGCCCCTGGCAGCACCAGGTCGTGGCCGCCGAGGCGGCGCAC
GCCGGCCAGCATGTCGTGCTCGCGACCGGCACCGCCTCCGGCAAGAGCCTGGCCTACCAGCTCCCCGCGCTCTCGACCCT
CCGCGGCTCCCGGGGGCCGCGCGGCCAGCGCGGGGCCACCGTGCTGTACCTCGCACCGACCAAGGCGCTCGCCCAGGACC
AGCTGGCCGGGCTGAGCGGGCTCGGGCTCGACCTGCGGGTCACCACCCATGACGGCGACAGCTCACGCGAGCAGCGCGAC
TGGGCCCGCGACCACGGCGAGTACGTCCTCACCAACCCCGACATGCTGCACCGCTCCCTGCTGCCCGGGCACTCCCGCTG
GGCGGGGTTCCTCGGCGCCCTGCAGTACGTCGTCGTCGACGAGTGCCACCACTACCGCGGGGTCTTCGGCGCTCACGTCG
CCCACGTGCTCCGACGGCTGCGGCGGGTGTGCGCGACGTACGGCGCGAGCCCGACCTTCGTGCTGGCCTCCGCCACCGTC
GCGGAGCCCGAGGCCGCCGCCCGGCGGCTCACCGGCCTCGACGTGCAGGCGGTCACCGCCGACCACTCTCCGCGCGGCCG
GGTGTCACTGCTGCTGTGGGAGCCGCCCTTCACCTCCTTCACCGGCGAGAACGGCGCGCCCGTGCGCCGGGCCGCCTCCT
CCGAGACCGCCGACCTGCTCGCCGACCTGGTGGCCGAGGACGTGCGCACGCTCGCGTTCATCCGCTCCCGCCGCGGTGCC
GAGCAGGTCGCGATGACCGCCGCCGAGCTGCTCACCGACGTCGACCCGGTGCTCGCAGGCCGGGTGGCGTCCTACCGCGG
CGGCTACCTGCCCGAGGAGCGTCGGGCGATCGAGGACTCGCTGCGTCGCGGCGAGATCACCGGGCTCGCCGCGACCAACG
CCCTCGAGCTCGGCATCGACATCAGCGGCCTCGACGCCGTGGTGATGGCCGGCTTCCCCGGCACCCGCGCCGCCCTGTGG
CAGCAGGTCGGCCGGGCCGGGCGGGGCGCCCAGGACGCCCTCGCCGTCCTCGTCGCCCGCGACGACCCGCTCGACACCTA
CCTCGTCACCCACCCCGAGGCGCTGCTGGGCCGCCCGGTCGAGGCGACCGTGTTCGACCCGTCCAATCCCTACGTCCTCG
GTCCGCACCTGTGCGCGGCCGCACACGAGGCACCGCTCACCGAGGCCGACCTGCCGCTGTTCGGTCCGACCGCGCGCGAG
GTCGTCGACGCGCTGACCGAGGGCGGGCTGCTGCGCCGCCGCCCGCGCGGCTGGTTCTGGACCGACCGGCGCCGGGCCAG
CGACCTCGCCGACATCCGGTCGACCGGCGGCGCTCCCGTCCAGCTCGTCGAGGCGGAGACGGGCCGCGTGATCGGCACGG
TCGACGCCTCGAGCGCCCACGGCACCGCCCACCCCGGCGCGGTGTACGTGCACCGCGGCGAGACCTGGTTGGTGTGCTCG
CTCGACCTCGAGGACCGCGTGGCGGTGATCCAACGCGCCCAGCCCGACTACTCCACGACCGCCCGCGAGGTCACCGAGAT
CTCGGTCGTGCGCGAGCGTGAGCACACCGCCTGGGGTGACTGCCGGCTGTCCTTCGGCGAGGTCGACGTCACCCACCAGG
TGGTGTCCTTCCTCAAGCGGCGCCAACCCGGCGGCGACGTGCTCGGCGAGGAGCCGCTCGACCTGCCCGAGCGCTCGTTG
CGCACGGCGGCCGTGTGGTGGACGGTGCCCGACCACGCCGTGACCGAGGCGGGCCTCTCCGGCCGTGACCTGCCGGGTGC
CGCGCACGCCGCCGAGCACTGCTCGATCGGTCTGCTGCCGCTCTTCGCGACCTGCGACCGGTGGGACATCGGCGGAGTGT
CGACGGCGGTGCACCCCGACACCGGGCGACTGACGGTGTTCGTCTACGACGGGCACCCCGGTGGCGCGGGATTCGCCGAG
CGCGGATTCCGAGCGGCCCGGGAGTGGCTGACGGCGACCCGGGACACGATCCGCTCGTGCACCTGCGAGGACGGCTGCCC
GTCGTGCATCCAGTCGCCCAAGTGTGGCAACCAGAACAACCCGCTCGACAAGGCGGGCGCCGCCGCACTCCTCGACGTAC
TCCTCGGCGAGGCCTAG

Upstream 100 bases:

>100_bases
AGGGTACGCCGGCCAGCCCCGGACCAGCGCCGGGCCAGCCCCGGACCAGCCCGGAGCGAGGTGGTGCCGCGCTGTCGGTG
GCGTCGGAGAGGATGGTGGG

Downstream 100 bases:

>100_bases
TCTCGCCCGCATGGTGATCCTCGGCATCCTCCTCATCGCGCTGGGCGCGGTGGCGATCGTCGCGGCGCTCGGCACCGCCG
AGGGCTCCGGCGTCGAGCTC

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 778; Mature: 778

Protein sequence:

>778_residues
MRAVLGSQARTAGDLRDVVERLVAAPGREDRLCHLEVLPARAARHADWPAWADPDVVAAFAARGVARPWQHQVVAAEAAH
AGQHVVLATGTASGKSLAYQLPALSTLRGSRGPRGQRGATVLYLAPTKALAQDQLAGLSGLGLDLRVTTHDGDSSREQRD
WARDHGEYVLTNPDMLHRSLLPGHSRWAGFLGALQYVVVDECHHYRGVFGAHVAHVLRRLRRVCATYGASPTFVLASATV
AEPEAAARRLTGLDVQAVTADHSPRGRVSLLLWEPPFTSFTGENGAPVRRAASSETADLLADLVAEDVRTLAFIRSRRGA
EQVAMTAAELLTDVDPVLAGRVASYRGGYLPEERRAIEDSLRRGEITGLAATNALELGIDISGLDAVVMAGFPGTRAALW
QQVGRAGRGAQDALAVLVARDDPLDTYLVTHPEALLGRPVEATVFDPSNPYVLGPHLCAAAHEAPLTEADLPLFGPTARE
VVDALTEGGLLRRRPRGWFWTDRRRASDLADIRSTGGAPVQLVEAETGRVIGTVDASSAHGTAHPGAVYVHRGETWLVCS
LDLEDRVAVIQRAQPDYSTTAREVTEISVVREREHTAWGDCRLSFGEVDVTHQVVSFLKRRQPGGDVLGEEPLDLPERSL
RTAAVWWTVPDHAVTEAGLSGRDLPGAAHAAEHCSIGLLPLFATCDRWDIGGVSTAVHPDTGRLTVFVYDGHPGGAGFAE
RGFRAAREWLTATRDTIRSCTCEDGCPSCIQSPKCGNQNNPLDKAGAAALLDVLLGEA

Sequences:

>Translated_778_residues
MRAVLGSQARTAGDLRDVVERLVAAPGREDRLCHLEVLPARAARHADWPAWADPDVVAAFAARGVARPWQHQVVAAEAAH
AGQHVVLATGTASGKSLAYQLPALSTLRGSRGPRGQRGATVLYLAPTKALAQDQLAGLSGLGLDLRVTTHDGDSSREQRD
WARDHGEYVLTNPDMLHRSLLPGHSRWAGFLGALQYVVVDECHHYRGVFGAHVAHVLRRLRRVCATYGASPTFVLASATV
AEPEAAARRLTGLDVQAVTADHSPRGRVSLLLWEPPFTSFTGENGAPVRRAASSETADLLADLVAEDVRTLAFIRSRRGA
EQVAMTAAELLTDVDPVLAGRVASYRGGYLPEERRAIEDSLRRGEITGLAATNALELGIDISGLDAVVMAGFPGTRAALW
QQVGRAGRGAQDALAVLVARDDPLDTYLVTHPEALLGRPVEATVFDPSNPYVLGPHLCAAAHEAPLTEADLPLFGPTARE
VVDALTEGGLLRRRPRGWFWTDRRRASDLADIRSTGGAPVQLVEAETGRVIGTVDASSAHGTAHPGAVYVHRGETWLVCS
LDLEDRVAVIQRAQPDYSTTAREVTEISVVREREHTAWGDCRLSFGEVDVTHQVVSFLKRRQPGGDVLGEEPLDLPERSL
RTAAVWWTVPDHAVTEAGLSGRDLPGAAHAAEHCSIGLLPLFATCDRWDIGGVSTAVHPDTGRLTVFVYDGHPGGAGFAE
RGFRAAREWLTATRDTIRSCTCEDGCPSCIQSPKCGNQNNPLDKAGAAALLDVLLGEA
>Mature_778_residues
MRAVLGSQARTAGDLRDVVERLVAAPGREDRLCHLEVLPARAARHADWPAWADPDVVAAFAARGVARPWQHQVVAAEAAH
AGQHVVLATGTASGKSLAYQLPALSTLRGSRGPRGQRGATVLYLAPTKALAQDQLAGLSGLGLDLRVTTHDGDSSREQRD
WARDHGEYVLTNPDMLHRSLLPGHSRWAGFLGALQYVVVDECHHYRGVFGAHVAHVLRRLRRVCATYGASPTFVLASATV
AEPEAAARRLTGLDVQAVTADHSPRGRVSLLLWEPPFTSFTGENGAPVRRAASSETADLLADLVAEDVRTLAFIRSRRGA
EQVAMTAAELLTDVDPVLAGRVASYRGGYLPEERRAIEDSLRRGEITGLAATNALELGIDISGLDAVVMAGFPGTRAALW
QQVGRAGRGAQDALAVLVARDDPLDTYLVTHPEALLGRPVEATVFDPSNPYVLGPHLCAAAHEAPLTEADLPLFGPTARE
VVDALTEGGLLRRRPRGWFWTDRRRASDLADIRSTGGAPVQLVEAETGRVIGTVDASSAHGTAHPGAVYVHRGETWLVCS
LDLEDRVAVIQRAQPDYSTTAREVTEISVVREREHTAWGDCRLSFGEVDVTHQVVSFLKRRQPGGDVLGEEPLDLPERSL
RTAAVWWTVPDHAVTEAGLSGRDLPGAAHAAEHCSIGLLPLFATCDRWDIGGVSTAVHPDTGRLTVFVYDGHPGGAGFAE
RGFRAAREWLTATRDTIRSCTCEDGCPSCIQSPKCGNQNNPLDKAGAAALLDVLLGEA

Specific function: Unknown

COG id: COG1205

COG function: function code R; Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787942, Length=477, Percent_Identity=27.2536687631027, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6320497, Length=796, Percent_Identity=31.2814070351759, Blast_Score=376, Evalue=1e-105,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR018973
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021 [H]

Pfam domain/function: PF00270 DEAD; PF09369 DUF1998; PF00271 Helicase_C [H]

EC number: 3.6.1.- [C]

Molecular weight: Translated: 83325; Mature: 83325

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVLGSQARTAGDLRDVVERLVAAPGREDRLCHLEVLPARAARHADWPAWADPDVVAAF
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCCCCHHHHHHH
AARGVARPWQHQVVAAEAAHAGQHVVLATGTASGKSLAYQLPALSTLRGSRGPRGQRGAT
HHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCHHHHCCCCCCCCCCCCE
VLYLAPTKALAQDQLAGLSGLGLDLRVTTHDGDSSREQRDWARDHGEYVLTNPDMLHRSL
EEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEECHHHHHHHH
LPGHSRWAGFLGALQYVVVDECHHYRGVFGAHVAHVLRRLRRVCATYGASPTFVLASATV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
AEPEAAARRLTGLDVQAVTADHSPRGRVSLLLWEPPFTSFTGENGAPVRRAASSETADLL
CCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHH
ADLVAEDVRTLAFIRSRRGAEQVAMTAAELLTDVDPVLAGRVASYRGGYLPEERRAIEDS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHH
LRRGEITGLAATNALELGIDISGLDAVVMAGFPGTRAALWQQVGRAGRGAQDALAVLVAR
HHCCCEEEEEECCEEEECCEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEEC
DDPLDTYLVTHPEALLGRPVEATVFDPSNPYVLGPHLCAAAHEAPLTEADLPLFGPTARE
CCCCCEEEEECCHHHHCCCCEEEEECCCCCEEECCHHHHHHCCCCCCCCCCCCCCCCHHH
VVDALTEGGLLRRRPRGWFWTDRRRASDLADIRSTGGAPVQLVEAETGRVIGTVDASSAH
HHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCC
GTAHPGAVYVHRGETWLVCSLDLEDRVAVIQRAQPDYSTTAREVTEISVVREREHTAWGD
CCCCCCEEEEECCCEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
CRLSFGEVDVTHQVVSFLKRRQPGGDVLGEEPLDLPERSLRTAAVWWTVPDHAVTEAGLS
CEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCEEEEEEECCCHHHHHCCCC
GRDLPGAAHAAEHCSIGLLPLFATCDRWDIGGVSTAVHPDTGRLTVFVYDGHPGGAGFAE
CCCCCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHH
RGFRAAREWLTATRDTIRSCTCEDGCPSCIQSPKCGNQNNPLDKAGAAALLDVLLGEA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRAVLGSQARTAGDLRDVVERLVAAPGREDRLCHLEVLPARAARHADWPAWADPDVVAAF
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCCCCHHHHHHH
AARGVARPWQHQVVAAEAAHAGQHVVLATGTASGKSLAYQLPALSTLRGSRGPRGQRGAT
HHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCHHHHCCCCCCCCCCCCE
VLYLAPTKALAQDQLAGLSGLGLDLRVTTHDGDSSREQRDWARDHGEYVLTNPDMLHRSL
EEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEECHHHHHHHH
LPGHSRWAGFLGALQYVVVDECHHYRGVFGAHVAHVLRRLRRVCATYGASPTFVLASATV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
AEPEAAARRLTGLDVQAVTADHSPRGRVSLLLWEPPFTSFTGENGAPVRRAASSETADLL
CCHHHHHHHHCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHCCCHHHHHH
ADLVAEDVRTLAFIRSRRGAEQVAMTAAELLTDVDPVLAGRVASYRGGYLPEERRAIEDS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHH
LRRGEITGLAATNALELGIDISGLDAVVMAGFPGTRAALWQQVGRAGRGAQDALAVLVAR
HHCCCEEEEEECCEEEECCEECCCCEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEEC
DDPLDTYLVTHPEALLGRPVEATVFDPSNPYVLGPHLCAAAHEAPLTEADLPLFGPTARE
CCCCCEEEEECCHHHHCCCCEEEEECCCCCEEECCHHHHHHCCCCCCCCCCCCCCCCHHH
VVDALTEGGLLRRRPRGWFWTDRRRASDLADIRSTGGAPVQLVEAETGRVIGTVDASSAH
HHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCC
GTAHPGAVYVHRGETWLVCSLDLEDRVAVIQRAQPDYSTTAREVTEISVVREREHTAWGD
CCCCCCEEEEECCCEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
CRLSFGEVDVTHQVVSFLKRRQPGGDVLGEEPLDLPERSLRTAAVWWTVPDHAVTEAGLS
CEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCEEEEEEECCCHHHHHCCCC
GRDLPGAAHAAEHCSIGLLPLFATCDRWDIGGVSTAVHPDTGRLTVFVYDGHPGGAGFAE
CCCCCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCHHH
RGFRAAREWLTATRDTIRSCTCEDGCPSCIQSPKCGNQNNPLDKAGAAALLDVLLGEA
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]