| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714640
Identifier: 119714640
GI number: 119714640
Start: 402495
End: 403265
Strand: Reverse
Name: 119714640
Synonym: Noca_0375
Alternate gene names: NA
Gene position: 403265-402495 (Counterclockwise)
Preceding gene: 119714641
Following gene: 119714638
Centisome position: 8.09
GC content: 76.78
Gene sequence:
>771_bases ATGTACCCCTACGACGACGACGACCGGTGGTCCTACGCCCCGCCGGCAGCACCCGACCGGGTCACCCACCTGGTCTTCGT CGACGGCCGCCTGGTCGACACCTGGCGCGAGCCGGCGATCGGCACCGAGTGGGAGCCGGTCGCCCTGCGTCACGACCGGG AGGCGCTGCCTCCCCAGCCGCCCCCGCCGGCCCCGCACGAGCGGGTGGCGCAGTGGCTCGCGGGCGTGTGCGGCGGCCGC GCTGCCGTCGACGGGCTCACCGACGAGCCGCTGGGCGACGACCGGATCGACCTGCCCACCGAGTACCCCGATCGCACCGA CCGCGAGCGGGTCGAGGCGACCGCCGACCTCCTGGACGCGGTCGCGGAGCGGTGCTTCGACGCGGAGACGTCCTACGCCT TCCGCCACGCGCTGCTCGCGCTGTGGGCCGAGGATCCGGACGTGGTCACCCGGGCGGCCAGTGCCGCGCACGTGGCCGGC GGGATCTGCTGGGCGGTCGGCAAGGCCAACGGCCTGTTCAGCCCGGCCGGTGGGATGCGGGTGGGCGTGGTGCAGGAGGC GTTGGCGCTGCGCTCGCCGGCATCGGGGTACGGCGGCACGGTCCGCACCGCGCTGCTCGGGTTCCGCAACCAGCCCGTGG GCCACTGGTCGCGGCCGGCCGGCGTGCCGGACCTGCTGGTCCTGGGCCGGTGCGACCTGCTGCTGGGCGTCACCCGCTCT CGGCTGCTCCGGATCCGCGACCGGGCCCGCGCCGCGGCCGCCGCGGCGTGA
Upstream 100 bases:
>100_bases TGCGCTGAGCCGACCCGCGCAGGGACCCTGTGGACGACGGGGCCGGATCGGGGGTGGGCCGTGCCAGCGTGGTCGGCCCA TCCCCTGAACGGAGGCTTCG
Downstream 100 bases:
>100_bases GCCGCGGGCCATCGGGATCAGGCCAGCAGGAAGCCCTCGGCGACCAGCGACCGCGCGGCAGGCAGGTACGTCTCGATCGT CTGGGCGGGGTCGAGGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MYPYDDDDRWSYAPPAAPDRVTHLVFVDGRLVDTWREPAIGTEWEPVALRHDREALPPQPPPPAPHERVAQWLAGVCGGR AAVDGLTDEPLGDDRIDLPTEYPDRTDRERVEATADLLDAVAERCFDAETSYAFRHALLALWAEDPDVVTRAASAAHVAG GICWAVGKANGLFSPAGGMRVGVVQEALALRSPASGYGGTVRTALLGFRNQPVGHWSRPAGVPDLLVLGRCDLLLGVTRS RLLRIRDRARAAAAAA
Sequences:
>Translated_256_residues MYPYDDDDRWSYAPPAAPDRVTHLVFVDGRLVDTWREPAIGTEWEPVALRHDREALPPQPPPPAPHERVAQWLAGVCGGR AAVDGLTDEPLGDDRIDLPTEYPDRTDRERVEATADLLDAVAERCFDAETSYAFRHALLALWAEDPDVVTRAASAAHVAG GICWAVGKANGLFSPAGGMRVGVVQEALALRSPASGYGGTVRTALLGFRNQPVGHWSRPAGVPDLLVLGRCDLLLGVTRS RLLRIRDRARAAAAAA >Mature_256_residues MYPYDDDDRWSYAPPAAPDRVTHLVFVDGRLVDTWREPAIGTEWEPVALRHDREALPPQPPPPAPHERVAQWLAGVCGGR AAVDGLTDEPLGDDRIDLPTEYPDRTDRERVEATADLLDAVAERCFDAETSYAFRHALLALWAEDPDVVTRAASAAHVAG GICWAVGKANGLFSPAGGMRVGVVQEALALRSPASGYGGTVRTALLGFRNQPVGHWSRPAGVPDLLVLGRCDLLLGVTRS RLLRIRDRARAAAAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27666; Mature: 27666
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPYDDDDRWSYAPPAAPDRVTHLVFVDGRLVDTWREPAIGTEWEPVALRHDREALPPQP CCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCCCCCCC PPPAPHERVAQWLAGVCGGRAAVDGLTDEPLGDDRIDLPTEYPDRTDRERVEATADLLDA CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VAERCFDAETSYAFRHALLALWAEDPDVVTRAASAAHVAGGICWAVGKANGLFSPAGGMR HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC VGVVQEALALRSPASGYGGTVRTALLGFRNQPVGHWSRPAGVPDLLVLGRCDLLLGVTRS HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RLLRIRDRARAAAAAA HHHHHHHHHHHHHHCC >Mature Secondary Structure MYPYDDDDRWSYAPPAAPDRVTHLVFVDGRLVDTWREPAIGTEWEPVALRHDREALPPQP CCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCCCCCCCCCCCCEEECCCCCCCCCCC PPPAPHERVAQWLAGVCGGRAAVDGLTDEPLGDDRIDLPTEYPDRTDRERVEATADLLDA CCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH VAERCFDAETSYAFRHALLALWAEDPDVVTRAASAAHVAGGICWAVGKANGLFSPAGGMR HHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC VGVVQEALALRSPASGYGGTVRTALLGFRNQPVGHWSRPAGVPDLLVLGRCDLLLGVTRS HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RLLRIRDRARAAAAAA HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA