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The map label for this gene is yeiE [C]

Identifier: 119714493

GI number: 119714493

Start: 243144

End: 244100

Strand: Direct

Name: yeiE [C]

Synonym: Noca_0226

Alternate gene names: 119714493

Gene position: 243144-244100 (Clockwise)

Preceding gene: 119714492

Following gene: 119714494

Centisome position: 4.88

GC content: 74.4

Gene sequence:

>957_bases
GTGACCCCGACCCAGCTCCGGGCGTTCGCGACCGTCGTCCGCCTCGGGTCGGTCAAGGCCGCGGCCGCCGAGCTCGAGGT
GTCGGAGGCGGCGGTGTCCCTGCACGTCGGGCAGCTGCGCAAGGAGCTCGGCGACCAGCTCTTCAACCGGACCGCGTCGG
GCCTCGCGTTCACGCCCGGCGGGCTGCGGCTGGCCAGTCGCGCGGTGGAGCTGCTCGGCCTCCAGGACCGCACCGTGCTC
GAGGTGCGGGAGGCCGGCGTCGGCCGCCGGATGCTGAGGCTCGGCACCACCTCGCTGTTCGCGGAGTACGCCGCCCCTGG
GCTGATCGGCCTGTTCGCCGACCGCGCCCGCGACCTCGACGTCGAGCTCAGCGTCCATCGGGCGCGGGACTTCGAGCAGC
TGCTGCTGACCCGCACGGTCGACGCGGTCGTCGGCCCGCGCCCGGCCACCGGCGACCCGGCGCTGATCAGCAAGCTCTTC
CTCAACTACCAGGTCCTGGCCGTGGTCGGTCCCGAGCACCCCGTCACCCGCGGTCAGCCCGGCATCGCGATGCTCCGCGA
CCAGACCTGGCTGCTCGGACCCTCGGCCGCCGACGACGCCGGAGTGATCCCCGGACTGCTGCAGAGGATCGGCGTACCCG
AGGAGCGGCAGCAGATCTTCCAGTCCCACGCCGCCGCGCTCGAGGAGGCCAAGCGCGGCCGCGGCATCACGCTCGCCGTG
GCGTTCGCCGTCGCCCAGGACCTCGCCACCGGCGCCCTGGTCCGCGTCCCCGGTCGCCCGGTACAGGGCCAGGGCTCGTG
GAACATCTCGATCCTCGGCGGCGAGCGGGCCACGCCGGCTGCGGAGGAGATGGCGCGCTTCGTCACGACCCCCCGGGCCA
CCCAGGCGATGCTCCGCGGCCGCGGTGTCACCCACGGCCGGTTCAAGCCCGCCGTGCACGTGACCCTCTGGAGCTGA

Upstream 100 bases:

>100_bases
CCGCGGGTGACGCGCTCGTGACCGTGCCGGTCGTCGGCGACGTACCGGCCGACGTCGACACCGAGGCGGACTACCGGGCG
CTGCTGGCGAGGTGGGACCG

Downstream 100 bases:

>100_bases
GGAACGGGTCGTGTGCCTGAGCACGCGCCATGGCGCGTGCTCAGGCACACGACCCGACCTAAGCGAACCCTTGATCCGCG
GTTGCCGCCCCCTGTGACGG

Product: substrate-binding protein LysR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MTPTQLRAFATVVRLGSVKAAAAELEVSEAAVSLHVGQLRKELGDQLFNRTASGLAFTPGGLRLASRAVELLGLQDRTVL
EVREAGVGRRMLRLGTTSLFAEYAAPGLIGLFADRARDLDVELSVHRARDFEQLLLTRTVDAVVGPRPATGDPALISKLF
LNYQVLAVVGPEHPVTRGQPGIAMLRDQTWLLGPSAADDAGVIPGLLQRIGVPEERQQIFQSHAAALEEAKRGRGITLAV
AFAVAQDLATGALVRVPGRPVQGQGSWNISILGGERATPAAEEMARFVTTPRATQAMLRGRGVTHGRFKPAVHVTLWS

Sequences:

>Translated_318_residues
MTPTQLRAFATVVRLGSVKAAAAELEVSEAAVSLHVGQLRKELGDQLFNRTASGLAFTPGGLRLASRAVELLGLQDRTVL
EVREAGVGRRMLRLGTTSLFAEYAAPGLIGLFADRARDLDVELSVHRARDFEQLLLTRTVDAVVGPRPATGDPALISKLF
LNYQVLAVVGPEHPVTRGQPGIAMLRDQTWLLGPSAADDAGVIPGLLQRIGVPEERQQIFQSHAAALEEAKRGRGITLAV
AFAVAQDLATGALVRVPGRPVQGQGSWNISILGGERATPAAEEMARFVTTPRATQAMLRGRGVTHGRFKPAVHVTLWS
>Mature_317_residues
TPTQLRAFATVVRLGSVKAAAAELEVSEAAVSLHVGQLRKELGDQLFNRTASGLAFTPGGLRLASRAVELLGLQDRTVLE
VREAGVGRRMLRLGTTSLFAEYAAPGLIGLFADRARDLDVELSVHRARDFEQLLLTRTVDAVVGPRPATGDPALISKLFL
NYQVLAVVGPEHPVTRGQPGIAMLRDQTWLLGPSAADDAGVIPGLLQRIGVPEERQQIFQSHAAALEEAKRGRGITLAVA
FAVAQDLATGALVRVPGRPVQGQGSWNISILGGERATPAAEEMARFVTTPRATQAMLRGRGVTHGRFKPAVHVTLWS

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=259, Percent_Identity=27.4131274131274, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33960; Mature: 33828

Theoretical pI: Translated: 10.85; Mature: 10.85

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPTQLRAFATVVRLGSVKAAAAELEVSEAAVSLHVGQLRKELGDQLFNRTASGLAFTPG
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
GLRLASRAVELLGLQDRTVLEVREAGVGRRMLRLGTTSLFAEYAAPGLIGLFADRARDLD
HHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
VELSVHRARDFEQLLLTRTVDAVVGPRPATGDPALISKLFLNYQVLAVVGPEHPVTRGQP
EEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEEEECCCCCCCCCCC
GIAMLRDQTWLLGPSAADDAGVIPGLLQRIGVPEERQQIFQSHAAALEEAKRGRGITLAV
CEEEEECCEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHH
AFAVAQDLATGALVRVPGRPVQGQGSWNISILGGERATPAAEEMARFVTTPRATQAMLRG
HHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHC
RGVTHGRFKPAVHVTLWS
CCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TPTQLRAFATVVRLGSVKAAAAELEVSEAAVSLHVGQLRKELGDQLFNRTASGLAFTPG
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
GLRLASRAVELLGLQDRTVLEVREAGVGRRMLRLGTTSLFAEYAAPGLIGLFADRARDLD
HHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
VELSVHRARDFEQLLLTRTVDAVVGPRPATGDPALISKLFLNYQVLAVVGPEHPVTRGQP
EEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCEEEEEEECCCCCCCCCCC
GIAMLRDQTWLLGPSAADDAGVIPGLLQRIGVPEERQQIFQSHAAALEEAKRGRGITLAV
CEEEEECCEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHH
AFAVAQDLATGALVRVPGRPVQGQGSWNISILGGERATPAAEEMARFVTTPRATQAMLRG
HHHHHHHHHCCCEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHC
RGVTHGRFKPAVHVTLWS
CCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]