Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714445

Identifier: 119714445

GI number: 119714445

Start: 190923

End: 191534

Strand: Direct

Name: 119714445

Synonym: Noca_0178

Alternate gene names: NA

Gene position: 190923-191534 (Clockwise)

Preceding gene: 119714444

Following gene: 119714450

Centisome position: 3.83

GC content: 76.63

Gene sequence:

>612_bases
ATGGACGCCGTGCCCGTGCCCGTTCCTGGGTCTGTGACCCGCCTGCCCCGGCTCCTGCTGGCCGCCCTGCTGCTCGCCGG
CGGCGGTGTCGTCGCGACCGGCGCCATGGCGGCCCCCGCCCTCGCCTGCCCGGCGTCTCGGACCGGTCTGGATCAGCTGA
CGATGCAGGCCGACGACGTCTTCACCGGCGCCGTCGAGGACCGGGCCCGGCAGGGCCGCACGATCGTCTACACGGTCACC
GTCGACCGGGTCTACAAGGGCGACCTCGACGGCACCGAGGCCACCGTCACGACCCCGGCCCGGGCGCGGGCCTGTGGGCT
GCCGGACCTGCGCACCGGCACCGACTACGTCTTCTTCACCCAGGGTGCCGACCTCGAGACCACGAGCACCGCCGGGACCG
CGCCCGCGGCCGCCACCCTGCTGCGTCGCGTGGAGCGGCTGCTCGGCGAGGGTCACCCCGCGACGCCGCCGACGCCGCCC
GAGGCGACCTTCACGCTGGTCGGCGAGCAGCCCACCAGCTTCGAGCGGGTCGCCGCGCCCGGCGCGGCCCTCGTCATCGC
CGGCCTGCTGGGCCTGCTGCTCGTCGCCGGCCTGAGCCGCCGCCGGGCCTAG

Upstream 100 bases:

>100_bases
CCCGACGGTCACTGCGGCGGCCGACCACGTCGCGCCGGGACACGACGAGGACGGCGTGGCCCGGGTCCTGGCTGGTGTGT
TCGACCTGTGATCTGTTGAG

Downstream 100 bases:

>100_bases
CTAGGAGGTCTCCGGAAGGTCGTCCGGAGGGTGTCACCGCTGGCTCCGTCCGGATGACGTCCCGCGCAGACCCGCCGGCC
GGTCGGGCTCGGACCCCTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDVFTGAVEDRARQGRTIVYTVT
VDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFTQGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPP
EATFTLVGEQPTSFERVAAPGAALVIAGLLGLLLVAGLSRRRA

Sequences:

>Translated_203_residues
MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDVFTGAVEDRARQGRTIVYTVT
VDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFTQGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPP
EATFTLVGEQPTSFERVAAPGAALVIAGLLGLLLVAGLSRRRA
>Mature_203_residues
MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDVFTGAVEDRARQGRTIVYTVT
VDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFTQGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPP
EATFTLVGEQPTSFERVAAPGAALVIAGLLGLLLVAGLSRRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20816; Mature: 20816

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDV
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHCCHHHCCCCCCCHHHHHHHHHHH
FTGAVEDRARQGRTIVYTVTVDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFT
HHHHHHHHHHCCCEEEEEEEECEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCEEEEE
QGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPPEATFTLVGEQPTSFERVAAP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCC
GAALVIAGLLGLLLVAGLSRRRA
CHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDV
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHCCHHHCCCCCCCHHHHHHHHHHH
FTGAVEDRARQGRTIVYTVTVDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFT
HHHHHHHHHHCCCEEEEEEEECEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCEEEEE
QGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPPEATFTLVGEQPTSFERVAAP
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCC
GAALVIAGLLGLLLVAGLSRRRA
CHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA