| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386959
Identifier: 119386959
GI number: 119386959
Start: 1419940
End: 1420677
Strand: Direct
Name: 119386959
Synonym: Pden_4254
Alternate gene names: NA
Gene position: 1419940-1420677 (Clockwise)
Preceding gene: 119386958
Following gene: 119386960
Centisome position: 82.07
GC content: 72.36
Gene sequence:
>738_bases ATGCTGCTCTGGTTCCTGCCCATCGCCGCGGCCGTCTTCGGCGCAGCCATCCTGCGCGGCCTGACCGGCTTTGGCTTCGC GCTGGCGGCGGTGCCGCTGATGTCGCTGATCATCGAGCCCCGCATGGCGGTGGCCAGCACCATCCTGCTGCAGGTGATGA TCGGCTTTCACGACCTGCTGCACCTGCACGGCAGCTATGACCGCGCAGCCGTGCTGCGGCTGTCGCTGGGCTCGATGCTG GGGATGCCCTTCGGCATCGCAGCGCTGGCGCTGTTCGACCCCGATGCCGGGCGGCTCGCCATCGCGGCGATCTCGCTGGC CGGACTTGGCATGATGCTGCGCCAGCCGCAGCGCCGCGTGGCGCCGGGCCCCGGCGTGACGCTGGCCGCCGGGGTGCTGT CGGGCCTGTTCGGCAGCCTTGCCGCGATGCCCGGCCCGCCCACGGTGGCCTATTTCGTCGCCAGCGGCACCCCGGTCGCC CGCGCCCGCGCCTCGATGATGATCTTCTTCTTCGTCTCGGCGCTCATCACCCTGCCGGGACTGGCGGTCGCCGGGGCGGT GGACCTCGCCACGCTGGGGCTCAGCCTCGCGCTTTTGCCCCTGCTGGTCTCGGGCACATGGGTCGGCGGGCGGCTGTTTC TGCGGCTGGAGGCGCGGCATTATCGCGGCCTGGCGCTTGGCGTCATGGCGCTGGCGGCCGGGCTTGCCGGCGCGCGGGCG CTGGTCGGGATGCTCTGA
Upstream 100 bases:
>100_bases GGCCGGACCCGGTCTGGACGCCGGCCGGCACGCCGGCTAAGGCAGGCGCGTTCTCCCGTGTCCCAAGGCGCGGGATCGCC TTACCTGCCTGCAAGAGAAC
Downstream 100 bases:
>100_bases CCCCGCTTGCACCCTGCCGCGCAAAGGGCTACCAGCCCGGCCTTTGCGGACAGGGGCACGGAAATGCGCAACGACATGCT CGCCATCGATTTCGGAACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLLHLHGSYDRAAVLRLSLGSML GMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRVAPGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVA RARASMMIFFFVSALITLPGLAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA LVGML
Sequences:
>Translated_245_residues MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLLHLHGSYDRAAVLRLSLGSML GMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRVAPGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVA RARASMMIFFFVSALITLPGLAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA LVGML >Mature_245_residues MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLLHLHGSYDRAAVLRLSLGSML GMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRVAPGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVA RARASMMIFFFVSALITLPGLAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA LVGML
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25096; Mature: 25096
Theoretical pI: Translated: 12.07; Mature: 12.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLL CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH HLHGSYDRAAVLRLSLGSMLGMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRV HHCCCCCHHHHHHHHHHHHHCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHC APGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVARARASMMIFFFVSALITLPG CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC LAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH LVGML HHHCC >Mature Secondary Structure MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLL CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH HLHGSYDRAAVLRLSLGSMLGMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRV HHCCCCCHHHHHHHHHHHHHCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHC APGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVARARASMMIFFFVSALITLPG CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC LAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH LVGML HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA