Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386959

Identifier: 119386959

GI number: 119386959

Start: 1419940

End: 1420677

Strand: Direct

Name: 119386959

Synonym: Pden_4254

Alternate gene names: NA

Gene position: 1419940-1420677 (Clockwise)

Preceding gene: 119386958

Following gene: 119386960

Centisome position: 82.07

GC content: 72.36

Gene sequence:

>738_bases
ATGCTGCTCTGGTTCCTGCCCATCGCCGCGGCCGTCTTCGGCGCAGCCATCCTGCGCGGCCTGACCGGCTTTGGCTTCGC
GCTGGCGGCGGTGCCGCTGATGTCGCTGATCATCGAGCCCCGCATGGCGGTGGCCAGCACCATCCTGCTGCAGGTGATGA
TCGGCTTTCACGACCTGCTGCACCTGCACGGCAGCTATGACCGCGCAGCCGTGCTGCGGCTGTCGCTGGGCTCGATGCTG
GGGATGCCCTTCGGCATCGCAGCGCTGGCGCTGTTCGACCCCGATGCCGGGCGGCTCGCCATCGCGGCGATCTCGCTGGC
CGGACTTGGCATGATGCTGCGCCAGCCGCAGCGCCGCGTGGCGCCGGGCCCCGGCGTGACGCTGGCCGCCGGGGTGCTGT
CGGGCCTGTTCGGCAGCCTTGCCGCGATGCCCGGCCCGCCCACGGTGGCCTATTTCGTCGCCAGCGGCACCCCGGTCGCC
CGCGCCCGCGCCTCGATGATGATCTTCTTCTTCGTCTCGGCGCTCATCACCCTGCCGGGACTGGCGGTCGCCGGGGCGGT
GGACCTCGCCACGCTGGGGCTCAGCCTCGCGCTTTTGCCCCTGCTGGTCTCGGGCACATGGGTCGGCGGGCGGCTGTTTC
TGCGGCTGGAGGCGCGGCATTATCGCGGCCTGGCGCTTGGCGTCATGGCGCTGGCGGCCGGGCTTGCCGGCGCGCGGGCG
CTGGTCGGGATGCTCTGA

Upstream 100 bases:

>100_bases
GGCCGGACCCGGTCTGGACGCCGGCCGGCACGCCGGCTAAGGCAGGCGCGTTCTCCCGTGTCCCAAGGCGCGGGATCGCC
TTACCTGCCTGCAAGAGAAC

Downstream 100 bases:

>100_bases
CCCCGCTTGCACCCTGCCGCGCAAAGGGCTACCAGCCCGGCCTTTGCGGACAGGGGCACGGAAATGCGCAACGACATGCT
CGCCATCGATTTCGGAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLLHLHGSYDRAAVLRLSLGSML
GMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRVAPGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVA
RARASMMIFFFVSALITLPGLAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA
LVGML

Sequences:

>Translated_245_residues
MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLLHLHGSYDRAAVLRLSLGSML
GMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRVAPGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVA
RARASMMIFFFVSALITLPGLAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA
LVGML
>Mature_245_residues
MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLLHLHGSYDRAAVLRLSLGSML
GMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRVAPGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVA
RARASMMIFFFVSALITLPGLAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA
LVGML

Specific function: Unknown

COG id: COG0730

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25096; Mature: 25096

Theoretical pI: Translated: 12.07; Mature: 12.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLL
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
HLHGSYDRAAVLRLSLGSMLGMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRV
HHCCCCCHHHHHHHHHHHHHCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHC
APGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVARARASMMIFFFVSALITLPG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
LAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LVGML
HHHCC
>Mature Secondary Structure
MLLWFLPIAAAVFGAAILRGLTGFGFALAAVPLMSLIIEPRMAVASTILLQVMIGFHDLL
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
HLHGSYDRAAVLRLSLGSMLGMPFGIAALALFDPDAGRLAIAAISLAGLGMMLRQPQRRV
HHCCCCCHHHHHHHHHHHHHCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHC
APGPGVTLAAGVLSGLFGSLAAMPGPPTVAYFVASGTPVARARASMMIFFFVSALITLPG
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
LAVAGAVDLATLGLSLALLPLLVSGTWVGGRLFLRLEARHYRGLALGVMALAAGLAGARA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHH
LVGML
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA