| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is glcG [C]
Identifier: 119386958
GI number: 119386958
Start: 1419350
End: 1419775
Strand: Direct
Name: glcG [C]
Synonym: Pden_4253
Alternate gene names: 119386958
Gene position: 1419350-1419775 (Clockwise)
Preceding gene: 119386957
Following gene: 119386959
Centisome position: 82.04
GC content: 72.54
Gene sequence:
>426_bases ATGCTGACCATCACCCGACTGGACCAGGCGGATGCGCGCCTGCTGATCGCCGGCGCCGAGGCCCATGCCCGCGAGATCGG CGTGCCCATGTGCATCGCCGTCACCGACGAAAGCGGCCAGCTTCTGGCCTTTTCGCGCATGGATGGCGGCAAGGTGACAT CGGCCACCATCGCCGTCGACAAGGCGTTCACCGCCGCGGCCGCGCGCAAGGCCACGCATGAATACGGCGCCGCCAGCCAG CCGGGCGCGCCGGCCTGGGGCATCTCCTCGGCCATCGGCGGGCGGCTGATGGTGGTGGGCGGCGGGTTGCCGGTCGATCA CGACGGCCAGACCGTCGGCGGCATCGGCGTCTCGTCCGGCACGCCGGCCCAGGACCAGGCGGTGGCGCAGGCCGGCATCG ACCATTGGCGGGCGCATCGCGCCTGA
Upstream 100 bases:
>100_bases GCCAGCTATCGCGGTGCCCTGCGCCAACCCGACCCGCAAGGCGCCGGCCCGGGCGCAGCACCGGCCGAGTGAACGATTTC GACTAGGAGGAGGAAGAACC
Downstream 100 bases:
>100_bases TCGCCGAGGGACGGGGCCGGGCAGGACCGGCCCGTTCCCATCGGGCCACACCATGCGGGCCGCCGGCCGGACCCGGTCTG GACGCCGGCCGGCACGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFY [H]
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MLTITRLDQADARLLIAGAEAHAREIGVPMCIAVTDESGQLLAFSRMDGGKVTSATIAVDKAFTAAAARKATHEYGAASQ PGAPAWGISSAIGGRLMVVGGGLPVDHDGQTVGGIGVSSGTPAQDQAVAQAGIDHWRAHRA
Sequences:
>Translated_141_residues MLTITRLDQADARLLIAGAEAHAREIGVPMCIAVTDESGQLLAFSRMDGGKVTSATIAVDKAFTAAAARKATHEYGAASQ PGAPAWGISSAIGGRLMVVGGGLPVDHDGQTVGGIGVSSGTPAQDQAVAQAGIDHWRAHRA >Mature_141_residues MLTITRLDQADARLLIAGAEAHAREIGVPMCIAVTDESGQLLAFSRMDGGKVTSATIAVDKAFTAAAARKATHEYGAASQ PGAPAWGISSAIGGRLMVVGGGLPVDHDGQTVGGIGVSSGTPAQDQAVAQAGIDHWRAHRA
Specific function: Unknown
COG id: COG3193
COG function: function code R; Uncharacterized protein, possibly involved in utilization of glycolate and propanediol
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glcG family [H]
Homologues:
Organism=Escherichia coli, GI1789349, Length=118, Percent_Identity=37.2881355932203, Blast_Score=60, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005624 [H]
Pfam domain/function: PF03928 DUF336 [H]
EC number: NA
Molecular weight: Translated: 14255; Mature: 14255
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTITRLDQADARLLIAGAEAHAREIGVPMCIAVTDESGQLLAFSRMDGGKVTSATIAVD CEEEECCCCCCCEEEEECCCHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEC KAFTAAAARKATHEYGAASQPGAPAWGISSAIGGRLMVVGGGLPVDHDGQTVGGIGVSSG HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCEECCEECCCC TPAQDQAVAQAGIDHWRAHRA CCCHHHHHHHHCHHHHHHCCC >Mature Secondary Structure MLTITRLDQADARLLIAGAEAHAREIGVPMCIAVTDESGQLLAFSRMDGGKVTSATIAVD CEEEECCCCCCCEEEEECCCHHHHHCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEC KAFTAAAARKATHEYGAASQPGAPAWGISSAIGGRLMVVGGGLPVDHDGQTVGGIGVSSG HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCEECCEECCCC TPAQDQAVAQAGIDHWRAHRA CCCHHHHHHHHCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA