| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119386751
Identifier: 119386751
GI number: 119386751
Start: 1193832
End: 1195346
Strand: Direct
Name: 119386751
Synonym: Pden_4044
Alternate gene names: NA
Gene position: 1193832-1195346 (Clockwise)
Preceding gene: 119386750
Following gene: 119386752
Centisome position: 69.0
GC content: 68.71
Gene sequence:
>1515_bases ATGATGCTGCTGGTCGATATCGGCACCAATGCCGGGACCGTGCTCGAGCCGCATCTCCAGCAGCTTTTCGTCGATGCCAT GGCCCTGCCGAACCGGGTCGACCCGTTCCCGAACCTCGCCGGAGAGGTGAAGCTGCCGCCGCAGCGCCCCCGGCGACGAA CGCGTGGCCCGGCGCCGGCGCAGGTGAACCCGCTGCGGCAAGGACGCGAACCTTCGGCAGCGCTGGGATTTGCGACAAAA TGTCCTGCGCCGCGAAGATACGCCTGTGGCGCATGGACAATCCTCGACCCCGGCATGCACATTGGAACGCCGGATGACCC ATCCGCGCTTTCAGACCACAGCGGCTGCCAATACCTGATGCTTCGCCACCCGATCCATGGGCTGTGGCTCGCGCCGCATC GCCCCCTGTTTCTTCTTGCGGGCCTCTGGGCGGTGCTCGTCCCGCTGGTCTGGCTGGTGCCGCCGGGAATGGGCCCGGAC CCGCTGTCGTGGCACCGGCACGAATTGCTGTTCGGCATGGGCGGCGCGGCGGTCGGGGGCTATCTGCTGACCGCGCTGCC CGCATGGACGGGCCGGCCCCGGGTTGCGCCGGCAGCAACGGCGACCATGGTGGCACTTTGGTTTACCGGGCGGCTGGCCT TTCTCCTCGGCATGCCGCCGCCTTTTGCAGCGATTGGCGCGGCGGCCTATTTCCTCGCCCTGGGCGGCCTGCTTTCCCGG GAGGTCGCGAGGGCGAAAGCCTGGCGGAAGCTGCCGCTTGCACTGGCGCCGTTCGGCCTGGGTTGCCTCGAGCCGCTTGC GACGGGCGGTTTCGGCCCCGCCGCCGAAAGCGCCGCGCAGCAGTTGGCACCGCTGTTCTTTGCGCTGCTCATCAGCCTTG TCGGCGGCCGCGCCGTTGCCGCCTTCACCCGCCGCTGGACCTCGGCATCCTTGGGCAACCCATCCTTCGCCGACCCACGC TGGCTTTCGGGCGGCGGGTTTCTGGCACTGCTCACCGCCATCGCAGCGCTGCTTCAGGATGCCTCGGTGCTTGCCGGAGC GCTTCTTGTCGTCTCGGGCCTGCTGCAACTGGCCCGCATGCTCGCCTGGCGCAGTTGGCGCTGCGTCCGCTATCCGGCGC TGCTGCTATTGCACCTGGCCTGGCTATGGCTGCCCGTGGGCCTGATCCTGGCGGGCATGGCGCAGCTTTCGGCAGGCGGT CCTGGCATGGCCACGGCCCTGCACGCCATGACGATGGGCGCCATGGGCACGATGATGCTTGCGATCATGGGACGGGCGGC CATGGCCCGAAAGGGCGGAAGGCTGCTCGTGTCGCGCCCGCTTGCCGTCGCCTTCTGCCTTATTCACGCCTCGGCGCTGA TCCGGCTGCGGATGTGCTGCGGCGATCCAGAGGCCTTGCTGCACCTCGCGGCATCGATCTGGATGGCGGGATGGGCGCTG TTCCTTTGGGATTTCCGCCATGCGCTGCAGGGACCGATCCCAAGGCCCGTTCTCAGCGCGCGCAATCGGCCCTGA
Upstream 100 bases:
>100_bases GGTGCGCGACGGCACGCCGATCATGATCACGCCCTAGTCGTTCAGTCCCGGTCGGTGAGCCGGTGCCACGCTGGCCGAGG GGCCGCATCGCCAGGACCGC
Downstream 100 bases:
>100_bases CGATCCGGCCGCCACAATGGAAAGCGCCGACAGCGCAGGACAGCCATGGCCCGGCCCGAATGACGGGTTTGAAGCGCGGG ACATGGGTGACATATAGTCC
Product: NnrS family protein
Products: NA
Alternate protein names: NnrS Dehydrogenase; Asparagine Synthetase B
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPAQVNPLRQGREPSAALGFATK CPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLMLRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPD PLSWHRHELLFGMGGAAVGGYLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVAAFTRRWTSASLGNPSFADPR WLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARMLAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGG PGMATALHAMTMGAMGTMMLAIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL FLWDFRHALQGPIPRPVLSARNRP
Sequences:
>Translated_504_residues MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPAQVNPLRQGREPSAALGFATK CPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLMLRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPD PLSWHRHELLFGMGGAAVGGYLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVAAFTRRWTSASLGNPSFADPR WLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARMLAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGG PGMATALHAMTMGAMGTMMLAIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL FLWDFRHALQGPIPRPVLSARNRP >Mature_504_residues MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPAQVNPLRQGREPSAALGFATK CPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLMLRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPD PLSWHRHELLFGMGGAAVGGYLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVAAFTRRWTSASLGNPSFADPR WLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARMLAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGG PGMATALHAMTMGAMGTMMLAIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL FLWDFRHALQGPIPRPVLSARNRP
Specific function: Unknown
COG id: COG3213
COG function: function code P; Uncharacterized protein involved in response to NO
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53678; Mature: 53678
Theoretical pI: Translated: 11.57; Mature: 11.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPA CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC QVNPLRQGREPSAALGFATKCPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLM CCCHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE LRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPDPLSWHRHELLFGMGGAAVGG ECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH YLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVA HHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH AFTRRWTSASLGNPSFADPRWLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARM HHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGGPGMATALHAMTMGAMGTMML HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FLWDFRHALQGPIPRPVLSARNRP HHHHHHHHHCCCCCCHHHHCCCCC >Mature Secondary Structure MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPA CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC QVNPLRQGREPSAALGFATKCPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLM CCCHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE LRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPDPLSWHRHELLFGMGGAAVGG ECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH YLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVA HHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH AFTRRWTSASLGNPSFADPRWLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARM HHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGGPGMATALHAMTMGAMGTMML HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH FLWDFRHALQGPIPRPVLSARNRP HHHHHHHHHCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA