Definition Paracoccus denitrificans PD1222 chromosome 2, complete sequence.
Accession NC_008687
Length 1,730,097

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The map label for this gene is 119386751

Identifier: 119386751

GI number: 119386751

Start: 1193832

End: 1195346

Strand: Direct

Name: 119386751

Synonym: Pden_4044

Alternate gene names: NA

Gene position: 1193832-1195346 (Clockwise)

Preceding gene: 119386750

Following gene: 119386752

Centisome position: 69.0

GC content: 68.71

Gene sequence:

>1515_bases
ATGATGCTGCTGGTCGATATCGGCACCAATGCCGGGACCGTGCTCGAGCCGCATCTCCAGCAGCTTTTCGTCGATGCCAT
GGCCCTGCCGAACCGGGTCGACCCGTTCCCGAACCTCGCCGGAGAGGTGAAGCTGCCGCCGCAGCGCCCCCGGCGACGAA
CGCGTGGCCCGGCGCCGGCGCAGGTGAACCCGCTGCGGCAAGGACGCGAACCTTCGGCAGCGCTGGGATTTGCGACAAAA
TGTCCTGCGCCGCGAAGATACGCCTGTGGCGCATGGACAATCCTCGACCCCGGCATGCACATTGGAACGCCGGATGACCC
ATCCGCGCTTTCAGACCACAGCGGCTGCCAATACCTGATGCTTCGCCACCCGATCCATGGGCTGTGGCTCGCGCCGCATC
GCCCCCTGTTTCTTCTTGCGGGCCTCTGGGCGGTGCTCGTCCCGCTGGTCTGGCTGGTGCCGCCGGGAATGGGCCCGGAC
CCGCTGTCGTGGCACCGGCACGAATTGCTGTTCGGCATGGGCGGCGCGGCGGTCGGGGGCTATCTGCTGACCGCGCTGCC
CGCATGGACGGGCCGGCCCCGGGTTGCGCCGGCAGCAACGGCGACCATGGTGGCACTTTGGTTTACCGGGCGGCTGGCCT
TTCTCCTCGGCATGCCGCCGCCTTTTGCAGCGATTGGCGCGGCGGCCTATTTCCTCGCCCTGGGCGGCCTGCTTTCCCGG
GAGGTCGCGAGGGCGAAAGCCTGGCGGAAGCTGCCGCTTGCACTGGCGCCGTTCGGCCTGGGTTGCCTCGAGCCGCTTGC
GACGGGCGGTTTCGGCCCCGCCGCCGAAAGCGCCGCGCAGCAGTTGGCACCGCTGTTCTTTGCGCTGCTCATCAGCCTTG
TCGGCGGCCGCGCCGTTGCCGCCTTCACCCGCCGCTGGACCTCGGCATCCTTGGGCAACCCATCCTTCGCCGACCCACGC
TGGCTTTCGGGCGGCGGGTTTCTGGCACTGCTCACCGCCATCGCAGCGCTGCTTCAGGATGCCTCGGTGCTTGCCGGAGC
GCTTCTTGTCGTCTCGGGCCTGCTGCAACTGGCCCGCATGCTCGCCTGGCGCAGTTGGCGCTGCGTCCGCTATCCGGCGC
TGCTGCTATTGCACCTGGCCTGGCTATGGCTGCCCGTGGGCCTGATCCTGGCGGGCATGGCGCAGCTTTCGGCAGGCGGT
CCTGGCATGGCCACGGCCCTGCACGCCATGACGATGGGCGCCATGGGCACGATGATGCTTGCGATCATGGGACGGGCGGC
CATGGCCCGAAAGGGCGGAAGGCTGCTCGTGTCGCGCCCGCTTGCCGTCGCCTTCTGCCTTATTCACGCCTCGGCGCTGA
TCCGGCTGCGGATGTGCTGCGGCGATCCAGAGGCCTTGCTGCACCTCGCGGCATCGATCTGGATGGCGGGATGGGCGCTG
TTCCTTTGGGATTTCCGCCATGCGCTGCAGGGACCGATCCCAAGGCCCGTTCTCAGCGCGCGCAATCGGCCCTGA

Upstream 100 bases:

>100_bases
GGTGCGCGACGGCACGCCGATCATGATCACGCCCTAGTCGTTCAGTCCCGGTCGGTGAGCCGGTGCCACGCTGGCCGAGG
GGCCGCATCGCCAGGACCGC

Downstream 100 bases:

>100_bases
CGATCCGGCCGCCACAATGGAAAGCGCCGACAGCGCAGGACAGCCATGGCCCGGCCCGAATGACGGGTTTGAAGCGCGGG
ACATGGGTGACATATAGTCC

Product: NnrS family protein

Products: NA

Alternate protein names: NnrS Dehydrogenase; Asparagine Synthetase B

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPAQVNPLRQGREPSAALGFATK
CPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLMLRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPD
PLSWHRHELLFGMGGAAVGGYLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR
EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVAAFTRRWTSASLGNPSFADPR
WLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARMLAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGG
PGMATALHAMTMGAMGTMMLAIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL
FLWDFRHALQGPIPRPVLSARNRP

Sequences:

>Translated_504_residues
MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPAQVNPLRQGREPSAALGFATK
CPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLMLRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPD
PLSWHRHELLFGMGGAAVGGYLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR
EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVAAFTRRWTSASLGNPSFADPR
WLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARMLAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGG
PGMATALHAMTMGAMGTMMLAIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL
FLWDFRHALQGPIPRPVLSARNRP
>Mature_504_residues
MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPAQVNPLRQGREPSAALGFATK
CPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLMLRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPD
PLSWHRHELLFGMGGAAVGGYLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR
EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVAAFTRRWTSASLGNPSFADPR
WLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARMLAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGG
PGMATALHAMTMGAMGTMMLAIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL
FLWDFRHALQGPIPRPVLSARNRP

Specific function: Unknown

COG id: COG3213

COG function: function code P; Uncharacterized protein involved in response to NO

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53678; Mature: 53678

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPA
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
QVNPLRQGREPSAALGFATKCPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLM
CCCHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
LRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPDPLSWHRHELLFGMGGAAVGG
ECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH
YLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVA
HHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AFTRRWTSASLGNPSFADPRWLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARM
HHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGGPGMATALHAMTMGAMGTMML
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL
HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FLWDFRHALQGPIPRPVLSARNRP
HHHHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MMLLVDIGTNAGTVLEPHLQQLFVDAMALPNRVDPFPNLAGEVKLPPQRPRRRTRGPAPA
CEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
QVNPLRQGREPSAALGFATKCPAPRRYACGAWTILDPGMHIGTPDDPSALSDHSGCQYLM
CCCHHHCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
LRHPIHGLWLAPHRPLFLLAGLWAVLVPLVWLVPPGMGPDPLSWHRHELLFGMGGAAVGG
ECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH
YLLTALPAWTGRPRVAPAATATMVALWFTGRLAFLLGMPPPFAAIGAAAYFLALGGLLSR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
EVARAKAWRKLPLALAPFGLGCLEPLATGGFGPAAESAAQQLAPLFFALLISLVGGRAVA
HHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AFTRRWTSASLGNPSFADPRWLSGGGFLALLTAIAALLQDASVLAGALLVVSGLLQLARM
HHHHHHHCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAWRSWRCVRYPALLLLHLAWLWLPVGLILAGMAQLSAGGPGMATALHAMTMGAMGTMML
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
AIMGRAAMARKGGRLLVSRPLAVAFCLIHASALIRLRMCCGDPEALLHLAASIWMAGWAL
HHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FLWDFRHALQGPIPRPVLSARNRP
HHHHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA